PDB Chemical Component HLO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HLO

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O3	C14	1.213	1.243
C14	N4	1.336	1.392
C14	C11	1.495	1.454
N4	H4N1	1.020	1.015
N4	H4N2	1.020	1.014
C11	C10	1.396	1.392
C11	C12	1.382	1.392
C10	C9	1.392	1.388
C10	H10	1.103	1.086
C9	N3	1.335	1.339
C9	H9	1.103	1.083
N3	C13	1.346	1.340
N3	C8	1.455	1.460
C13	C12	1.392	1.388
C13	H13	1.103	1.083
C12	H12	1.103	1.085
C8	O2	1.416	1.426
C8	H8C1	1.115	1.095
C8	H8C2	1.115	1.095
O2	C7	1.428	1.425
C7	N2	1.445	1.476
C7	H7C1	1.115	1.096
C7	H7C2	1.115	1.096
N2	C2	1.340	1.334
N2	C6	1.349	1.334
C2	C1	1.489	1.454
C2	C3	1.391	1.388
C1	N1	1.265	1.303
C1	H1	1.103	1.114
N1	O1	1.379	1.398
O1	HA	0.950	0.972
C3	C4	1.389	1.391
C3	H3	1.103	1.087
C4	C5	1.400	1.391
C4	C22	1.483	1.455
C5	C6	1.402	1.388
C5	H5	1.103	1.086
C6	H6	1.103	1.083
C22	N5	1.272	1.302
C22	H22	1.103	1.115
N5	O4	1.405	1.397
O4	H4	0.949	0.973

Bond Angles for HLO

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O3	C14	N4	121.2	120.8
O3	C14	C11	119.7	121.4
N4	C14	C11	119.1	117.8
C14	N4	H4N1	121.2	119.2
C14	N4	H4N2	119.1	121.5
C14	C11	C10	120.4	120.1
C14	C11	C12	120.2	120.1
H4N1	N4	H4N2	119.7	119.3
C10	C11	C12	119.4	119.9
C11	C10	C9	120.3	118.8
C11	C10	H10	120.0	121.2
C11	C12	C13	117.9	118.8
C11	C12	H12	120.7	121.3
C9	C10	H10	119.7	120.0
C10	C9	N3	119.3	120.1
C10	C9	H9	122.4	122.8
N3	C9	H9	118.3	117.2
C9	N3	C13	121.5	122.4
C9	N3	C8	120.0	118.8
C13	N3	C8	118.6	118.8
N3	C13	C12	121.7	120.1
N3	C13	H13	117.5	117.1
N3	C8	O2	113.4	111.9
N3	C8	H8C1	110.8	110.5
N3	C8	H8C2	110.8	106.0
C12	C13	H13	120.9	122.8
C13	C12	H12	121.4	119.9
O2	C8	H8C1	110.8	111.7
O2	C8	H8C2	110.8	108.3
C8	O2	C7	109.2	114.1
H8C1	C8	H8C2	99.5	108.1
O2	C7	N2	105.0	112.0
O2	C7	H7C1	113.9	111.7
O2	C7	H7C2	113.9	108.3
N2	C7	H7C1	113.9	110.6
N2	C7	H7C2	113.9	106.0
C7	N2	C2	118.6	119.6
C7	N2	C6	119.0	117.1
H7C1	C7	H7C2	96.6	107.9
C2	N2	C6	122.3	123.3
N2	C2	C1	123.2	119.8
N2	C2	C3	119.4	119.6
N2	C6	C5	120.2	119.6
N2	C6	H6	118.0	117.7
C1	C2	C3	117.4	120.6
C2	C1	N1	123.2	123.0
C2	C1	H1	127.0	117.7
C2	C3	C4	120.5	118.8
C2	C3	H3	119.9	120.6
N1	C1	H1	109.8	119.3
C1	N1	O1	118.7	109.3
N1	O1	HA	118.7	101.6
C4	C3	H3	119.7	120.6
C3	C4	C5	118.9	119.9
C3	C4	C22	118.3	120.1
C5	C4	C22	122.8	120.0
C4	C5	C6	118.8	118.8
C4	C5	H5	120.6	121.2
C4	C22	N5	117.7	123.0
C4	C22	H22	128.4	117.6
C6	C5	H5	120.7	120.0
C5	C6	H6	121.8	122.7
N5	C22	H22	113.9	119.4
C22	N5	O4	123.3	109.3
N5	O4	H4	123.3	101.6

Torsion Angles for HLO

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N4	C14	O3	C11	178.7	180.9
O3	C14	N4	H4N1	180.0	179.1
O3	C14	N4	H4N2	1.3	359.1
O3	C14	C11	C10	178.7	180.8
O3	C14	C11	C12	359.8	0.9
O3	C14	N4	C11	181.3	179.1
N4	C14	C11	C10	0.0	360.0
N4	C14	C11	C12	181.1	180.0
H4N1	N4	C14	H4N2	178.7	180.0
O3	C14	C11	N4	178.7	180.9
C11	C14	N4	H4N1	358.7	360.0
C11	C14	N4	H4N2	180.0	180.0
C10	C11	C14	C12	178.9	180.0
C14	C11	C10	C9	180.9	180.0
C14	C11	C10	H10	0.9	0.0
C14	C11	C12	C13	179.1	180.0
C14	C11	C12	H12	359.1	360.0
H4N1	N4	C14	C11	358.7	360.0
C14	N4	H4N1	H4N2	181.3	180.0
H4N2	N4	C14	C11	180.0	180.0
C14	N4	H4N2	H4N1	178.7	180.0
C14	C11	C10	C12	181.1	180.0
C10	C11	C12	C13	0.2	0.0
C10	C11	C12	H12	180.2	180.0
C9	C10	C11	H10	180.0	179.9
C11	C10	C9	N3	0.2	0.1
C11	C10	C9	H9	180.2	180.0
C14	C11	C12	C10	178.9	180.0
C12	C11	C10	C9	359.8	359.9
C12	C11	C10	H10	179.8	180.0
N3	C13	C12	C11	359.8	0.0
C11	C12	C13	H13	179.7	180.0
C13	C12	C11	H12	180.0	180.0
C9	C10	C11	C12	359.8	359.9
C11	C10	C9	H10	180.0	180.1
N3	C9	C10	H9	180.0	180.0
C10	C9	N3	C13	359.8	360.0
C10	C9	N3	C8	181.0	180.0
H10	C10	C11	C12	179.8	180.0
C11	C10	H10	C9	180.0	179.9
H10	C10	C9	N3	180.2	180.0
H10	C10	C9	H9	0.2	360.0
N3	C9	C10	H10	180.2	180.0
C10	C9	N3	H9	180.0	180.0
C13	N3	C9	C8	178.8	180.0
C9	N3	C13	C12	0.2	360.0
C9	N3	C13	H13	180.3	180.0
C9	N3	C8	O2	303.0	90.0
C9	N3	C8	H8C1	177.7	215.2
C9	N3	C8	H8C2	68.3	332.1
H9	C9	C10	H10	0.2	360.0
C10	C9	H9	N3	180.0	180.0
H9	C9	N3	C13	179.8	180.0
H9	C9	N3	C8	0.9	360.0
C11	C12	C13	N3	359.8	0.0
C13	N3	C9	H9	179.8	180.0
C9	N3	C13	C8	181.2	180.0
C13	N3	C8	O2	124.1	270.0
C13	N3	C8	H8C1	358.9	35.2
C13	N3	C8	H8C2	249.4	152.1
C12	C13	N3	H13	180.0	179.9
N3	C13	C12	H12	179.8	180.0
C8	N3	C9	H9	0.9	360.0
C9	N3	C8	C13	178.9	180.0
C8	N3	C13	C12	179.1	180.0
C8	N3	C13	H13	359.1	0.1
O2	C8	N3	H8C1	125.3	234.8
O2	C8	N3	H8C2	234.7	117.9
N3	C8	O2	C7	213.1	184.6
H8C1	C8	N3	H8C2	109.4	243.1
C11	C12	C13	H12	180.0	180.0
C12	C13	N3	C8	179.1	180.0
N3	C13	C12	H13	180.0	180.1
H13	C13	N3	C8	359.1	0.1
N3	C13	H13	C12	180.0	179.9
H13	C13	C12	H12	359.8	360.0
C11	C12	H12	C13	180.0	180.0
H12	C12	C13	H13	359.8	360.0
N3	C8	O2	H8C1	234.7	124.6
N3	C8	O2	H8C2	125.3	243.5
H8C1	C8	O2	H8C2	250.6	118.9
C8	O2	C7	N2	120.8	175.3
C8	O2	C7	H7C1	355.5	300.0
C8	O2	C7	H7C2	246.1	58.8
N3	C8	H8C1	O2	126.7	234.7
N3	C8	H8C1	H8C2	243.4	115.6
O2	C8	H8C1	H8C2	116.6	240.9
H8C1	C8	O2	C7	338.4	60.0
N3	C8	H8C2	O2	233.3	120.3
N3	C8	H8C2	H8C1	116.7	241.5
O2	C8	H8C2	H8C1	243.4	121.2
H8C2	C8	O2	C7	87.9	301.1
C7	O2	C8	H8C1	338.4	60.0
C7	O2	C8	H8C2	87.9	301.1
N2	C7	O2	H7C1	125.3	235.3
N2	C7	O2	H7C2	234.8	116.6
O2	C7	N2	C2	280.8	90.0
O2	C7	N2	C6	97.9	270.0
H7C1	C7	O2	H7C2	109.5	241.3
O2	C7	N2	H7C1	234.7	125.3
O2	C7	N2	H7C2	125.3	242.0
H7C1	C7	N2	H7C2	250.5	116.7
C2	N2	C7	C6	182.9	180.0
C7	N2	C2	C1	358.2	0.0
C7	N2	C2	C3	178.0	180.0
C7	N2	C6	C5	181.8	180.0
C7	N2	C6	H6	1.7	360.0
O2	C7	H7C1	N2	120.4	234.5
O2	C7	H7C1	H7C2	240.2	119.0
N2	C7	H7C1	H7C2	119.8	244.5
H7C1	C7	N2	C2	46.1	324.7
H7C1	C7	N2	C6	223.2	144.8
O2	C7	H7C2	N2	239.6	120.4
O2	C7	H7C2	H7C1	119.8	238.9
N2	C7	H7C2	H7C1	240.2	118.5
H7C2	C7	N2	C2	155.6	208.0
H7C2	C7	N2	C6	332.7	28.0
C2	N2	C7	H7C1	46.1	324.7
C2	N2	C7	H7C2	155.6	208.0
C7	N2	C2	C6	177.0	180.0
C2	N2	C6	C5	358.7	0.0
C2	N2	C6	H6	178.7	180.0
C1	C2	N2	C3	180.3	180.1
N2	C2	C1	N1	267.9	149.9
N2	C2	C1	H1	87.9	330.0
N2	C2	C3	C4	0.2	0.1
N2	C2	C3	H3	180.2	180.0
C6	N2	C7	H7C1	223.2	144.8
C6	N2	C7	H7C2	332.7	28.0
C7	N2	C6	C2	183.0	180.0
C6	N2	C2	C1	181.3	180.0
C6	N2	C2	C3	1.0	359.9
C4	C5	C6	N2	0.4	0.0
N2	C6	C5	H5	180.4	179.9
C5	C6	N2	H6	180.0	180.0
C1	C2	N2	C6	181.3	180.0
N2	C2	C1	C3	179.7	179.9
C1	C2	C3	C4	180.0	180.0
C1	C2	C3	H3	359.9	359.9
N1	C1	C2	H1	180.0	179.9
C2	C1	N1	O1	181.4	180.0
C3	C2	N2	C6	1.0	359.9
N2	C2	C3	C1	180.3	180.1
C3	C2	C1	N1	88.2	330.0
C3	C2	C1	H1	268.1	150.0
C4	C3	C2	H3	180.0	180.1
C2	C3	C4	C5	358.9	360.0
C2	C3	C4	C22	180.3	179.9
N1	C1	C2	C3	88.2	330.0
C2	C1	N1	H1	180.0	180.1
C1	N1	O1	HA	180.0	179.7
H1	C1	C2	C3	268.1	150.0
C2	C1	H1	N1	180.0	179.9
H1	C1	N1	O1	1.4	360.0
O1	N1	C1	H1	1.4	360.0
C2	C3	C4	H3	180.0	179.9
C5	C4	C3	C22	178.7	180.0
C3	C4	C5	C6	0.8	360.0
C3	C4	C5	H5	180.8	180.0
C3	C4	C22	N5	59.2	359.9
C3	C4	C22	H22	239.2	180.0
C2	C3	H3	C4	180.0	180.1
H3	C3	C4	C5	179.0	180.1
H3	C3	C4	C22	0.3	0.0
N2	C6	C5	C4	0.4	0.0
C5	C4	C3	H3	179.0	180.1
C3	C4	C5	C22	181.4	180.0
C5	C4	C22	N5	240.6	179.9
C5	C4	C22	H22	60.6	359.9
C6	C5	C4	H5	180.0	179.9
C4	C5	C6	H6	180.4	180.0
C22	C4	C3	H3	0.3	0.0
C3	C4	C22	C5	178.6	180.0
C22	C4	C5	C6	179.4	180.0
C22	C4	C5	H5	359.4	0.1
N5	C22	C4	H22	180.0	180.0
C4	C22	N5	O4	180.2	180.0
N2	C6	C5	H6	180.0	180.0
C6	C5	C4	C22	179.4	180.0
C4	C5	C6	H5	180.0	180.1
H5	C5	C4	C22	359.4	0.1
C4	C5	H5	C6	180.0	179.9
H5	C5	C6	H6	0.4	360.0
N2	C6	H6	C5	180.0	180.0
H6	C6	C5	H5	0.4	360.0
C4	C22	N5	H22	180.0	180.0
C22	N5	O4	H4	180.0	179.7
C4	C22	H22	N5	180.0	180.0
H22	C22	N5	O4	0.1	360.0
O4	N5	C22	H22	0.1	360.0