PDB Chemical Component HL2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HL2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C O 1.226 1.208
C CA 1.509 1.507
C OXT 1.430 1.342
N CA 1.461 1.468
N H2 1.000 1.009
N H 1.000 1.008
CA CB 1.537 1.530
CA HA 1.100 1.090
CB CG 1.535 1.530
CB OH 1.418 1.428
CB HB 1.100 1.089
CG CD1 1.529 1.530
CG CD2 1.514 1.530
CG HG 1.100 1.090
OH HOH 0.950 0.967
CD1 HD1 1.100 1.090
CD1 HD1A 1.099 1.089
CD1 HD1B 1.100 1.091
CD2 HD2 1.100 1.090
CD2 HD2A 1.100 1.090
CD2 HD2B 1.099 1.090
OXT HXT 0.950 0.967

Bond Angles for HL2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O C CA 117.7 120.0
O C OXT 121.2 120.0
CA C OXT 121.1 120.0
C CA N 112.1 109.5
C CA CB 108.7 109.5
C CA HA 106.2 109.5
C OXT HXT 109.5 117.0
CA N H2 109.5 111.0
CA N H 109.5 111.1
N CA CB 102.6 109.5
N CA HA 112.0 109.4
H2 N H 109.5 111.0
CB CA HA 115.2 109.5
CA CB CG 119.7 109.4
CA CB OH 107.6 109.5
CA CB HB 102.5 109.5
CG CB OH 105.6 109.5
CG CB HB 104.7 109.4
CB CG CD1 117.3 109.5
CB CG CD2 107.8 109.5
CB CG HG 106.1 109.5
OH CB HB 117.4 109.5
CB OH HOH 109.5 114.0
CD1 CG CD2 111.9 109.5
CD1 CG HG 101.4 109.4
CG CD1 HD1 109.5 109.4
CG CD1 HD1A 109.4 109.5
CG CD1 HD1B 109.5 109.5
CD2 CG HG 112.2 109.5
CG CD2 HD2 109.5 109.4
CG CD2 HD2A 109.5 109.5
CG CD2 HD2B 109.5 109.5
HD1 CD1 HD1A 109.5 109.5
HD1 CD1 HD1B 109.5 109.4
HD1A CD1 HD1B 109.5 109.5
HD2 CD2 HD2A 109.5 109.5
HD2 CD2 HD2B 109.4 109.5
HD2A CD2 HD2B 109.5 109.5

Torsion Angles for HL2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CA C O OXT 180.0 180.3
O C CA N 268.6 340.0
O C CA CB 21.3 100.0
O C CA HA 145.9 220.0
O C OXT HXT 0.0 360.0
O C CA OXT 180.0 179.7
CA C OXT HXT 180.0 179.7
C CA N H2 180.0 66.1
C CA N H 300.0 190.1
N CA C CB 247.3 240.0
N CA C HA 122.7 120.0
CB CA C HA 235.4 240.0
C CA CB CG 71.5 181.5
C CA CB OH 191.9 301.5
C CA CB HB 316.3 61.6
O C OXT CA 180.0 180.3
OXT C CA N 88.5 160.2
OXT C CA CB 201.3 280.2
OXT C CA HA 325.9 40.3
N CA C OXT 88.5 160.2
C CA N CB 116.5 120.0
C CA N HA 240.7 240.0
H2 N CA H 240.0 236.0
CB CA N HA 124.2 120.0
N CA CB CG 190.4 301.5
N CA CB OH 310.8 61.5
N CA CB HB 75.2 181.6
CA N H2 H 120.0 124.0
H2 N CA CB 63.5 306.1
H2 N CA HA 299.3 186.1
CA N H H2 240.0 236.0
H N CA CB 183.5 70.1
H N CA HA 59.3 310.1
CB CA C OXT 201.3 280.2
C CA CB N 241.1 240.0
C CA CB HA 119.1 120.0
CB CA N H2 63.5 306.1
CB CA N H 183.5 70.1
N CA CB HA 238.0 240.0
CG CB CA OH 239.6 240.0
CG CB CA HB 115.2 120.0
CA CB CG CD1 354.4 174.5
CA CB CG CD2 227.2 294.5
CA CB CG HG 106.8 54.5
OH CB CA HB 235.6 239.9
CA CB OH HOH 180.0 300.0
HA CA C OXT 325.9 40.3
C CA HA N 122.8 120.0
C CA HA CB 239.5 240.0
HA CA N H2 299.3 186.1
HA CA N H 59.3 310.1
N CA HA CB 116.8 120.0
HA CA CB CG 312.4 61.5
HA CA CB OH 72.8 181.5
HA CA CB HB 197.3 301.5
CG CB CA HA 312.4 61.5
CA CB CG OH 121.4 120.0
CA CB CG HB 246.0 240.0
OH CB CG HB 124.6 120.0
CG CB OH HOH 309.0 60.0
CD1 CG CB CD2 127.2 240.0
CD1 CG CB HG 247.6 120.0
CB CG CD1 HD1 180.0 54.7
CB CG CD1 HD1A 300.0 174.8
CB CG CD1 HD1B 60.0 294.8
CD2 CG CB HG 120.4 240.0
CB CG CD2 HD2 180.0 60.0
CB CG CD2 HD2A 300.0 180.0
CB CG CD2 HD2B 60.0 300.0
OH CB CA HA 72.8 181.5
CA CB OH CG 231.0 240.0
CA CB OH HB 114.9 120.0
CG CB OH HB 243.8 240.0
OH CB CG CD1 233.0 54.5
OH CB CG CD2 105.8 174.5
OH CB CG HG 345.4 294.5
HB CB CA HA 197.3 301.5
CA CB HB CG 125.7 120.0
CA CB HB OH 242.3 240.0
CG CB HB OH 116.7 120.0
HB CB CG CD1 108.4 294.5
HB CB CG CD2 341.2 54.5
HB CB CG HG 220.8 174.5
HB CB OH HOH 65.2 180.0
CD1 CG CB OH 233.0 54.5
CD1 CG CB HB 108.4 294.5
CB CG CD1 CD2 234.8 120.1
CB CG CD1 HG 115.0 240.0
CD2 CG CD1 HG 240.2 120.0
CD1 CG CD2 HD2 49.7 180.0
CD1 CG CD2 HD2A 169.6 300.0
CD1 CG CD2 HD2B 289.7 60.0
HD1 CD1 CG HD1A 240.0 239.9
HD1 CD1 CG HD1B 120.0 119.9
HD1A CD1 CG HD1B 240.0 240.0
CD2 CG CB OH 105.8 174.5
CD2 CG CB HB 341.2 54.5
CB CG CD2 CD1 130.4 240.0
CB CG CD2 HG 243.6 120.0
CD1 CG CD2 HG 113.2 240.0
CD2 CG CD1 HD1 305.2 294.7
CD2 CG CD1 HD1A 65.3 54.7
CD2 CG CD1 HD1B 185.2 174.7
HD2 CD2 CG HD2A 240.0 240.0
HD2 CD2 CG HD2B 120.0 120.0
HD2A CD2 CG HD2B 240.0 240.0
HG CG CB OH 345.4 294.5
HG CG CB HB 220.8 174.5
CB CG HG CD1 236.9 120.0
CB CG HG CD2 117.4 240.0
CD1 CG HG CD2 240.5 120.0
HG CG CD1 HD1 65.0 174.7
HG CG CD1 HD1A 185.0 294.8
HG CG CD1 HD1B 305.0 54.8
HG CG CD2 HD2 296.4 300.0
HG CG CD2 HD2A 56.4 60.0
HG CG CD2 HD2B 176.4 180.0
HOH OH CB HB 65.2 180.0
HD1 CD1 CG CD2 305.2 294.7
HD1 CD1 CG HG 65.0 174.7
CG CD1 HD1 HD1A 120.0 120.1
CG CD1 HD1 HD1B 240.0 240.1
HD1A CD1 HD1 HD1B 120.0 120.0
HD1A CD1 CG CD2 65.3 54.7
HD1A CD1 CG HG 185.0 294.8
CG CD1 HD1A HD1 240.0 240.0
CG CD1 HD1A HD1B 120.0 120.0
HD1 CD1 HD1A HD1B 240.0 240.0
HD1B CD1 CG CD2 185.2 174.7
HD1B CD1 CG HG 305.0 54.8
CG CD1 HD1B HD1 120.0 119.9
CG CD1 HD1B HD1A 240.0 240.0
HD1 CD1 HD1B HD1A 120.0 120.0
HD2 CD2 CG HG 296.4 300.0
CG CD2 HD2 HD2A 120.0 120.0
CG CD2 HD2 HD2B 240.0 240.0
HD2A CD2 HD2 HD2B 120.0 120.0
HD2A CD2 CG HG 56.4 60.0
CG CD2 HD2A HD2 240.0 240.0
CG CD2 HD2A HD2B 120.0 120.0
HD2 CD2 HD2A HD2B 240.0 240.0
HD2B CD2 CG HG 176.4 180.0
CG CD2 HD2B HD2 120.0 120.0
CG CD2 HD2B HD2A 240.0 240.0
HD2 CD2 HD2B HD2A 120.0 120.0