PDB Chemical Component HK6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HK6
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CL |
C1 |
1.739 |
1.736 |
| C13 |
C1 |
1.379 |
1.382 |
| C13 |
C12 |
1.390 |
1.391 |
| C1 |
C2 |
1.380 |
1.383 |
| O |
C11 |
1.231 |
1.216 |
| N2 |
C12 |
1.413 |
1.394 |
| N2 |
C11 |
1.346 |
1.323 |
| C12 |
C4 |
1.401 |
1.394 |
| C2 |
C3 |
1.384 |
1.389 |
| C11 |
C10 |
1.501 |
1.467 |
| C9 |
C10 |
1.398 |
1.398 |
| C9 |
C8 |
1.384 |
1.378 |
| C10 |
C5 |
1.414 |
1.402 |
| C4 |
C3 |
1.397 |
1.388 |
| C4 |
N1 |
1.407 |
1.402 |
| C8 |
C7 |
1.374 |
1.385 |
| C5 |
N1 |
1.413 |
1.389 |
| C5 |
C6 |
1.396 |
1.388 |
| C7 |
C6 |
1.386 |
1.381 |
| C9 |
H7 |
1.080 |
1.080 |
| C8 |
H6 |
1.080 |
1.080 |
| C7 |
H5 |
1.080 |
1.080 |
| C6 |
H4 |
1.080 |
1.080 |
| N1 |
H3 |
1.000 |
0.970 |
| N2 |
H8 |
1.000 |
0.970 |
| C13 |
H9 |
1.080 |
1.079 |
| C3 |
H2 |
1.080 |
1.080 |
| C2 |
H1 |
1.080 |
1.080 |
Bond Angles for HK6
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CL |
C1 |
C2 |
119.5 |
119.9 |
| C13 |
C1 |
C2 |
121.7 |
120.2 |
| C1 |
C13 |
H9 |
120.4 |
119.9 |
| C13 |
C12 |
C4 |
119.9 |
119.5 |
| C1 |
C2 |
C3 |
119.3 |
120.0 |
| C1 |
C2 |
H1 |
120.4 |
120.1 |
| O |
C11 |
C10 |
119.5 |
117.1 |
| N2 |
C12 |
C4 |
123.7 |
121.5 |
| C12 |
N2 |
H8 |
113.2 |
116.4 |
| C12 |
C4 |
C3 |
119.5 |
120.0 |
| C2 |
C3 |
H2 |
119.9 |
120.1 |
| C11 |
C10 |
C5 |
125.0 |
120.8 |
| C9 |
C10 |
C5 |
118.6 |
119.3 |
| C9 |
C8 |
C7 |
120.5 |
120.3 |
| C8 |
C9 |
H7 |
119.7 |
119.9 |
| C9 |
C8 |
H6 |
119.7 |
119.8 |
| C10 |
C5 |
N1 |
123.7 |
120.1 |
| C10 |
C5 |
C6 |
119.6 |
119.9 |
| C4 |
C3 |
H2 |
119.9 |
119.9 |
| C4 |
N1 |
H3 |
119.9 |
120.4 |
| C8 |
C7 |
C6 |
120.3 |
120.3 |
| C7 |
C8 |
H6 |
119.8 |
119.8 |
| C8 |
C7 |
H5 |
119.9 |
119.8 |
| C5 |
N1 |
H3 |
119.8 |
120.4 |
| C5 |
C6 |
H4 |
119.9 |
119.9 |
| C6 |
C7 |
H5 |
119.9 |
119.8 |
| C7 |
C6 |
H4 |
119.9 |
120.0 |
Torsion Angles for HK6
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C13 |
C1 |
CL |
C2 |
176.5 |
180.0 |
| CL |
C1 |
C13 |
H9 |
5.4 |
359.9 |
| CL |
C1 |
C2 |
C3 |
174.2 |
180.8 |
| CL |
C1 |
C2 |
H1 |
354.2 |
0.9 |
| CL |
C1 |
C13 |
C2 |
183.5 |
180.0 |
| C1 |
C13 |
C12 |
C4 |
0.5 |
358.6 |
| C13 |
C1 |
C2 |
C3 |
357.8 |
0.8 |
| C13 |
C1 |
C2 |
H1 |
177.8 |
180.8 |
| N2 |
C12 |
C13 |
C4 |
179.9 |
179.6 |
| C13 |
C12 |
N2 |
H8 |
329.1 |
320.0 |
| C13 |
C12 |
C4 |
C3 |
357.7 |
2.3 |
| C2 |
C1 |
C13 |
H9 |
181.8 |
179.9 |
| C1 |
C2 |
C3 |
H2 |
180.3 |
180.1 |
| O |
C11 |
C10 |
C5 |
208.4 |
219.1 |
| C13 |
C12 |
N2 |
C4 |
180.1 |
180.4 |
| N2 |
C12 |
C4 |
C3 |
177.8 |
182.7 |
| C4 |
C12 |
N2 |
H8 |
149.0 |
139.5 |
| C12 |
C4 |
C3 |
H2 |
181.9 |
178.4 |
| C12 |
C4 |
N1 |
H3 |
239.8 |
240.7 |
| C1 |
C2 |
C3 |
H1 |
180.0 |
180.1 |
| C4 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
| C9 |
C10 |
C11 |
C5 |
171.6 |
179.6 |
| C11 |
C10 |
C5 |
N1 |
354.3 |
355.2 |
| C11 |
C10 |
C5 |
C6 |
170.1 |
176.8 |
| C11 |
C10 |
C9 |
C5 |
187.8 |
180.4 |
| C9 |
C10 |
C5 |
N1 |
182.9 |
175.6 |
| C9 |
C10 |
C5 |
C6 |
358.7 |
357.2 |
| C8 |
C9 |
C10 |
C5 |
3.4 |
1.7 |
| C9 |
C8 |
C7 |
C6 |
0.4 |
359.0 |
| C7 |
C8 |
C9 |
H6 |
180.0 |
179.9 |
| C9 |
C8 |
C7 |
H5 |
180.4 |
178.9 |
| C10 |
C5 |
N1 |
H3 |
128.0 |
120.1 |
| C10 |
C5 |
C6 |
H4 |
178.8 |
182.0 |
| C1 |
C2 |
C3 |
C4 |
0.3 |
0.1 |
| C2 |
C3 |
C4 |
H2 |
180.0 |
180.0 |
| C3 |
C4 |
N1 |
H3 |
54.2 |
63.4 |
| C5 |
N1 |
C4 |
H3 |
180.0 |
179.9 |
| C7 |
C8 |
C9 |
H7 |
177.1 |
180.2 |
| C9 |
C8 |
C7 |
H6 |
180.0 |
180.1 |
| C6 |
C7 |
C8 |
H5 |
180.0 |
180.1 |
| C8 |
C7 |
C6 |
H4 |
181.7 |
179.8 |
| C10 |
C5 |
N1 |
C6 |
175.9 |
181.7 |
| C4 |
N1 |
C5 |
H3 |
180.0 |
180.1 |
| N1 |
C5 |
C6 |
H4 |
354.9 |
3.7 |
| C10 |
C5 |
C6 |
N1 |
183.9 |
178.3 |
| C5 |
C6 |
C7 |
H5 |
181.7 |
180.0 |
| C7 |
C6 |
C5 |
H4 |
180.0 |
179.9 |
| C10 |
C5 |
C6 |
C7 |
358.8 |
2.0 |
| C6 |
C7 |
C8 |
H6 |
180.4 |
178.9 |
| C8 |
C7 |
C6 |
H5 |
180.0 |
179.9 |
| C5 |
C6 |
C7 |
H4 |
180.0 |
180.1 |
| H7 |
C9 |
C10 |
C5 |
183.3 |
181.7 |
| H7 |
C9 |
C8 |
C7 |
177.1 |
180.2 |
| H7 |
C9 |
C8 |
H6 |
357.1 |
0.3 |
| C9 |
C8 |
H6 |
C7 |
180.0 |
179.9 |
| H6 |
C8 |
C9 |
H7 |
357.1 |
0.3 |
| H6 |
C8 |
C7 |
C6 |
180.4 |
178.9 |
| H6 |
C8 |
C7 |
H5 |
0.4 |
358.8 |
| C8 |
C7 |
H5 |
C6 |
180.0 |
180.1 |
| H5 |
C7 |
C8 |
H6 |
0.4 |
358.8 |
| H5 |
C7 |
C6 |
H4 |
1.7 |
359.9 |
| H4 |
C6 |
C7 |
H5 |
1.7 |
359.9 |
| H8 |
N2 |
C12 |
C4 |
149.0 |
139.5 |
| H9 |
C13 |
C1 |
C2 |
181.8 |
179.9 |
| H9 |
C13 |
C12 |
C4 |
180.5 |
178.6 |
| C1 |
C2 |
H1 |
C3 |
180.0 |
179.9 |
| H1 |
C2 |
C3 |
H2 |
0.3 |
0.0 |