PDB Chemical Component HI6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HI6
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O3 |
C14 |
1.210 |
1.215 |
C14 |
N4 |
1.334 |
1.348 |
C14 |
C11 |
1.498 |
1.481 |
N4 |
HN41 |
1.000 |
0.970 |
N4 |
HN42 |
1.000 |
0.970 |
C11 |
C10 |
1.401 |
1.399 |
C11 |
C12 |
1.381 |
1.398 |
C10 |
C9 |
1.399 |
1.381 |
C10 |
H10 |
1.081 |
1.081 |
C9 |
N3 |
1.351 |
1.318 |
C9 |
H9 |
1.080 |
1.080 |
N3 |
C13 |
1.341 |
1.318 |
N3 |
C8 |
1.462 |
1.465 |
C13 |
C12 |
1.382 |
1.382 |
C13 |
H13 |
1.080 |
1.080 |
C12 |
H12 |
1.080 |
1.080 |
C8 |
O2 |
1.406 |
1.430 |
C8 |
H81 |
1.100 |
1.090 |
C8 |
H82 |
1.100 |
1.090 |
O2 |
C7 |
1.424 |
1.429 |
C7 |
N2 |
1.445 |
1.465 |
C7 |
H71 |
1.100 |
1.090 |
C7 |
H72 |
1.100 |
1.090 |
N2 |
C2 |
1.350 |
1.328 |
N2 |
C6 |
1.345 |
1.316 |
C2 |
C1 |
1.498 |
1.477 |
C2 |
C3 |
1.403 |
1.395 |
C1 |
N1 |
1.272 |
1.294 |
C1 |
H1 |
1.080 |
1.080 |
N1 |
O1 |
1.385 |
1.415 |
O1 |
HO1 |
0.951 |
0.967 |
C3 |
C4 |
1.397 |
1.384 |
C3 |
H3 |
1.080 |
1.080 |
C4 |
C5 |
1.397 |
1.387 |
C4 |
H4 |
1.080 |
1.080 |
C5 |
C6 |
1.394 |
1.384 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.080 |
Bond Angles for HI6
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O3 |
C14 |
N4 |
121.4 |
120.0 |
O3 |
C14 |
C11 |
116.4 |
120.0 |
N4 |
C14 |
C11 |
122.3 |
120.0 |
C14 |
N4 |
HN41 |
123.6 |
120.0 |
C14 |
N4 |
HN42 |
112.7 |
120.0 |
C14 |
C11 |
C10 |
124.4 |
121.0 |
C14 |
C11 |
C12 |
115.7 |
120.9 |
HN41 |
N4 |
HN42 |
123.6 |
120.0 |
C10 |
C11 |
C12 |
119.9 |
118.1 |
C11 |
C10 |
C9 |
118.7 |
119.0 |
C11 |
C10 |
H10 |
120.7 |
120.4 |
C11 |
C12 |
C13 |
119.3 |
119.0 |
C11 |
C12 |
H12 |
120.4 |
120.5 |
C9 |
C10 |
H10 |
120.7 |
120.5 |
C10 |
C9 |
N3 |
119.6 |
120.9 |
C10 |
C9 |
H9 |
120.2 |
119.5 |
N3 |
C9 |
H9 |
120.2 |
119.6 |
C9 |
N3 |
C13 |
122.0 |
122.0 |
C9 |
N3 |
C8 |
123.3 |
119.0 |
C13 |
N3 |
C8 |
114.7 |
119.0 |
N3 |
C13 |
C12 |
120.6 |
120.9 |
N3 |
C13 |
H13 |
119.7 |
119.6 |
N3 |
C8 |
O2 |
115.4 |
109.5 |
N3 |
C8 |
H81 |
106.2 |
109.5 |
N3 |
C8 |
H82 |
107.5 |
109.4 |
C12 |
C13 |
H13 |
119.7 |
119.5 |
C13 |
C12 |
H12 |
120.3 |
120.5 |
O2 |
C8 |
H81 |
106.2 |
109.5 |
O2 |
C8 |
H82 |
107.6 |
109.4 |
C8 |
O2 |
C7 |
107.2 |
106.8 |
H81 |
C8 |
H82 |
114.2 |
109.5 |
O2 |
C7 |
N2 |
106.4 |
109.4 |
O2 |
C7 |
H71 |
111.2 |
109.4 |
O2 |
C7 |
H72 |
110.5 |
109.5 |
N2 |
C7 |
H71 |
111.2 |
109.5 |
N2 |
C7 |
H72 |
110.5 |
109.5 |
C7 |
N2 |
C2 |
119.4 |
119.2 |
C7 |
N2 |
C6 |
118.1 |
119.2 |
H71 |
C7 |
H72 |
107.1 |
109.5 |
C2 |
N2 |
C6 |
122.5 |
121.6 |
N2 |
C2 |
C1 |
121.9 |
119.7 |
N2 |
C2 |
C3 |
119.2 |
120.5 |
N2 |
C6 |
C5 |
120.3 |
120.9 |
N2 |
C6 |
H6 |
119.8 |
119.6 |
C1 |
C2 |
C3 |
118.8 |
119.8 |
C2 |
C1 |
N1 |
126.6 |
120.0 |
C2 |
C1 |
H1 |
116.7 |
120.0 |
C2 |
C3 |
C4 |
119.5 |
119.0 |
C2 |
C3 |
H3 |
120.2 |
120.5 |
N1 |
C1 |
H1 |
116.7 |
120.0 |
C1 |
N1 |
O1 |
118.5 |
120.0 |
N1 |
O1 |
HO1 |
109.5 |
106.8 |
C4 |
C3 |
H3 |
120.3 |
120.5 |
C3 |
C4 |
C5 |
119.5 |
118.5 |
C3 |
C4 |
H4 |
120.2 |
120.7 |
C5 |
C4 |
H4 |
120.3 |
120.7 |
C4 |
C5 |
C6 |
118.9 |
119.4 |
C4 |
C5 |
H5 |
120.5 |
120.3 |
C6 |
C5 |
H5 |
120.5 |
120.3 |
C5 |
C6 |
H6 |
119.9 |
119.5 |
Torsion Angles for HI6
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N4 |
C14 |
O3 |
C11 |
180.2 |
180.1 |
O3 |
C14 |
N4 |
HN41 |
360.0 |
360.0 |
O3 |
C14 |
N4 |
HN42 |
180.0 |
179.7 |
O3 |
C14 |
C11 |
C10 |
166.0 |
0.1 |
O3 |
C14 |
C11 |
C12 |
346.3 |
179.8 |
O3 |
C14 |
N4 |
C11 |
179.7 |
179.9 |
N4 |
C14 |
C11 |
C10 |
345.8 |
180.0 |
N4 |
C14 |
C11 |
C12 |
166.1 |
359.7 |
HN41 |
N4 |
C14 |
HN42 |
180.0 |
180.3 |
O3 |
C14 |
C11 |
N4 |
180.2 |
180.1 |
C11 |
C14 |
N4 |
HN41 |
180.2 |
180.0 |
C11 |
C14 |
N4 |
HN42 |
0.3 |
359.7 |
C10 |
C11 |
C14 |
C12 |
179.7 |
180.3 |
C14 |
C11 |
C10 |
C9 |
180.5 |
180.0 |
C14 |
C11 |
C10 |
H10 |
0.5 |
360.0 |
C14 |
C11 |
C12 |
C13 |
179.1 |
179.8 |
C14 |
C11 |
C12 |
H12 |
359.1 |
0.3 |
HN41 |
N4 |
C14 |
C11 |
180.2 |
180.0 |
C14 |
N4 |
HN41 |
HN42 |
180.0 |
179.7 |
HN42 |
N4 |
C14 |
C11 |
0.3 |
359.7 |
C14 |
N4 |
HN42 |
HN41 |
180.0 |
180.3 |
C14 |
C11 |
C10 |
C12 |
180.3 |
179.7 |
C10 |
C11 |
C12 |
C13 |
359.4 |
359.5 |
C10 |
C11 |
C12 |
H12 |
179.3 |
180.0 |
C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
C11 |
C10 |
C9 |
N3 |
0.6 |
0.0 |
C11 |
C10 |
C9 |
H9 |
180.6 |
179.9 |
C14 |
C11 |
C12 |
C10 |
179.7 |
180.3 |
C12 |
C11 |
C10 |
C9 |
0.2 |
0.2 |
C12 |
C11 |
C10 |
H10 |
180.2 |
180.3 |
N3 |
C13 |
C12 |
C11 |
0.2 |
0.5 |
C11 |
C12 |
C13 |
H13 |
180.1 |
180.3 |
C13 |
C12 |
C11 |
H12 |
180.0 |
179.5 |
C9 |
C10 |
C11 |
C12 |
0.2 |
0.2 |
C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
N3 |
C9 |
C10 |
H9 |
180.0 |
180.1 |
C10 |
C9 |
N3 |
C13 |
358.9 |
359.9 |
C10 |
C9 |
N3 |
C8 |
182.1 |
180.0 |
H10 |
C10 |
C11 |
C12 |
180.2 |
180.3 |
C11 |
C10 |
H10 |
C9 |
180.0 |
180.0 |
H10 |
C10 |
C9 |
N3 |
180.6 |
180.0 |
H10 |
C10 |
C9 |
H9 |
0.6 |
359.9 |
N3 |
C9 |
C10 |
H10 |
180.6 |
180.0 |
C10 |
C9 |
N3 |
H9 |
180.0 |
179.9 |
C13 |
N3 |
C9 |
C8 |
176.8 |
180.0 |
C9 |
N3 |
C13 |
C12 |
0.7 |
359.8 |
C9 |
N3 |
C13 |
H13 |
180.8 |
180.0 |
C9 |
N3 |
C8 |
O2 |
317.3 |
90.0 |
C9 |
N3 |
C8 |
H81 |
199.9 |
210.0 |
C9 |
N3 |
C8 |
H82 |
77.3 |
330.0 |
H9 |
C9 |
C10 |
H10 |
0.6 |
359.9 |
C10 |
C9 |
H9 |
N3 |
180.0 |
180.1 |
H9 |
C9 |
N3 |
C13 |
178.9 |
180.0 |
H9 |
C9 |
N3 |
C8 |
2.1 |
0.1 |
C11 |
C12 |
C13 |
N3 |
0.2 |
0.5 |
C13 |
N3 |
C9 |
H9 |
178.9 |
180.0 |
C9 |
N3 |
C13 |
C8 |
183.0 |
180.0 |
C13 |
N3 |
C8 |
O2 |
140.3 |
270.0 |
C13 |
N3 |
C8 |
H81 |
23.0 |
30.0 |
C13 |
N3 |
C8 |
H82 |
260.3 |
150.1 |
C12 |
C13 |
N3 |
H13 |
180.0 |
179.8 |
N3 |
C13 |
C12 |
H12 |
180.2 |
180.0 |
C8 |
N3 |
C9 |
H9 |
2.1 |
0.1 |
C9 |
N3 |
C8 |
C13 |
177.0 |
180.0 |
C8 |
N3 |
C13 |
C12 |
177.7 |
179.8 |
C8 |
N3 |
C13 |
H13 |
357.8 |
360.0 |
O2 |
C8 |
N3 |
H81 |
117.4 |
240.0 |
O2 |
C8 |
N3 |
H82 |
240.0 |
120.0 |
N3 |
C8 |
O2 |
C7 |
215.8 |
180.0 |
H81 |
C8 |
N3 |
H82 |
122.6 |
240.0 |
C11 |
C12 |
C13 |
H12 |
180.0 |
180.5 |
C12 |
C13 |
N3 |
C8 |
177.7 |
179.8 |
N3 |
C13 |
C12 |
H13 |
180.0 |
180.2 |
H13 |
C13 |
N3 |
C8 |
357.8 |
360.0 |
N3 |
C13 |
H13 |
C12 |
180.0 |
179.8 |
H13 |
C13 |
C12 |
H12 |
0.2 |
359.8 |
C11 |
C12 |
H12 |
C13 |
180.0 |
179.5 |
H12 |
C12 |
C13 |
H13 |
0.2 |
359.8 |
N3 |
C8 |
O2 |
H81 |
242.6 |
120.0 |
N3 |
C8 |
O2 |
H82 |
120.0 |
240.0 |
H81 |
C8 |
O2 |
H82 |
237.4 |
120.0 |
C8 |
O2 |
C7 |
N2 |
113.7 |
180.0 |
C8 |
O2 |
C7 |
H71 |
352.5 |
300.0 |
C8 |
O2 |
C7 |
H72 |
233.7 |
60.0 |
N3 |
C8 |
H81 |
O2 |
123.3 |
240.0 |
N3 |
C8 |
H81 |
H82 |
241.7 |
120.0 |
O2 |
C8 |
H81 |
H82 |
118.4 |
240.0 |
H81 |
C8 |
O2 |
C7 |
333.2 |
60.0 |
N3 |
C8 |
H82 |
O2 |
235.2 |
120.0 |
N3 |
C8 |
H82 |
H81 |
117.6 |
240.0 |
O2 |
C8 |
H82 |
H81 |
242.4 |
120.0 |
H82 |
C8 |
O2 |
C7 |
95.8 |
300.0 |
C7 |
O2 |
C8 |
H81 |
333.2 |
60.0 |
C7 |
O2 |
C8 |
H82 |
95.8 |
300.0 |
N2 |
C7 |
O2 |
H71 |
121.2 |
240.0 |
N2 |
C7 |
O2 |
H72 |
240.0 |
120.0 |
O2 |
C7 |
N2 |
C2 |
270.9 |
179.7 |
O2 |
C7 |
N2 |
C6 |
89.7 |
0.0 |
H71 |
C7 |
O2 |
H72 |
118.8 |
240.0 |
O2 |
C7 |
N2 |
H71 |
238.8 |
120.0 |
O2 |
C7 |
N2 |
H72 |
120.0 |
240.0 |
H71 |
C7 |
N2 |
H72 |
241.2 |
120.1 |
C2 |
N2 |
C7 |
C6 |
181.2 |
179.7 |
C7 |
N2 |
C2 |
C1 |
359.8 |
0.3 |
C7 |
N2 |
C2 |
C3 |
178.0 |
179.8 |
C7 |
N2 |
C6 |
C5 |
181.2 |
180.0 |
C7 |
N2 |
C6 |
H6 |
1.2 |
359.9 |
O2 |
C7 |
H71 |
N2 |
118.4 |
240.0 |
O2 |
C7 |
H71 |
H72 |
239.2 |
120.0 |
N2 |
C7 |
H71 |
H72 |
120.8 |
240.0 |
H71 |
C7 |
N2 |
C2 |
32.1 |
59.8 |
H71 |
C7 |
N2 |
C6 |
210.9 |
240.0 |
O2 |
C7 |
H72 |
N2 |
242.5 |
120.0 |
O2 |
C7 |
H72 |
H71 |
121.2 |
240.0 |
N2 |
C7 |
H72 |
H71 |
238.8 |
120.1 |
H72 |
C7 |
N2 |
C2 |
150.9 |
299.7 |
H72 |
C7 |
N2 |
C6 |
329.7 |
120.0 |
C2 |
N2 |
C7 |
H71 |
32.1 |
59.8 |
C2 |
N2 |
C7 |
H72 |
150.9 |
299.7 |
C7 |
N2 |
C2 |
C6 |
178.8 |
180.3 |
C2 |
N2 |
C6 |
C5 |
360.0 |
0.3 |
C2 |
N2 |
C6 |
H6 |
180.0 |
180.2 |
C1 |
C2 |
N2 |
C3 |
181.8 |
180.5 |
N2 |
C2 |
C1 |
N1 |
296.0 |
179.5 |
N2 |
C2 |
C1 |
H1 |
116.0 |
359.5 |
N2 |
C2 |
C3 |
C4 |
1.2 |
0.5 |
N2 |
C2 |
C3 |
H3 |
181.3 |
180.2 |
C6 |
N2 |
C7 |
H71 |
210.9 |
240.0 |
C6 |
N2 |
C7 |
H72 |
329.7 |
120.0 |
C7 |
N2 |
C6 |
C2 |
181.2 |
179.7 |
C6 |
N2 |
C2 |
C1 |
181.1 |
180.0 |
C6 |
N2 |
C2 |
C3 |
359.2 |
359.5 |
C4 |
C5 |
C6 |
N2 |
0.3 |
359.9 |
N2 |
C6 |
C5 |
H5 |
180.3 |
180.0 |
C5 |
C6 |
N2 |
H6 |
180.0 |
180.0 |
C1 |
C2 |
N2 |
C6 |
181.1 |
180.0 |
N2 |
C2 |
C1 |
C3 |
178.2 |
179.5 |
C1 |
C2 |
C3 |
C4 |
179.4 |
180.0 |
C1 |
C2 |
C3 |
H3 |
359.5 |
359.8 |
N1 |
C1 |
C2 |
H1 |
180.0 |
180.0 |
C2 |
C1 |
N1 |
O1 |
180.3 |
180.0 |
C3 |
C2 |
N2 |
C6 |
359.2 |
359.5 |
N2 |
C2 |
C3 |
C1 |
181.8 |
180.5 |
C3 |
C2 |
C1 |
N1 |
117.8 |
360.0 |
C3 |
C2 |
C1 |
H1 |
297.8 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.3 |
C2 |
C3 |
C4 |
C5 |
359.1 |
359.7 |
C2 |
C3 |
C4 |
H4 |
179.1 |
179.8 |
N1 |
C1 |
C2 |
C3 |
117.8 |
360.0 |
C2 |
C1 |
N1 |
H1 |
180.0 |
180.0 |
C1 |
N1 |
O1 |
HO1 |
147.3 |
180.0 |
H1 |
C1 |
C2 |
C3 |
297.8 |
180.0 |
C2 |
C1 |
H1 |
N1 |
180.0 |
180.0 |
H1 |
C1 |
N1 |
O1 |
0.3 |
360.0 |
O1 |
N1 |
C1 |
H1 |
0.3 |
360.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
179.7 |
C5 |
C4 |
C3 |
H4 |
180.0 |
179.9 |
C3 |
C4 |
C5 |
C6 |
0.2 |
0.1 |
C3 |
C4 |
C5 |
H5 |
180.2 |
180.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.3 |
H3 |
C3 |
C4 |
C5 |
179.0 |
180.0 |
H3 |
C3 |
C4 |
H4 |
359.0 |
0.1 |
N2 |
C6 |
C5 |
C4 |
0.3 |
359.9 |
C5 |
C4 |
C3 |
H3 |
179.0 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
H6 |
180.3 |
180.0 |
H4 |
C4 |
C3 |
H3 |
359.0 |
0.1 |
C3 |
C4 |
H4 |
C5 |
180.0 |
179.9 |
H4 |
C4 |
C5 |
C6 |
180.2 |
180.0 |
H4 |
C4 |
C5 |
H5 |
0.2 |
359.9 |
N2 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H4 |
180.2 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.9 |
H5 |
C5 |
C4 |
H4 |
0.2 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.1 |
H5 |
C5 |
C6 |
H6 |
0.3 |
0.0 |
N2 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
0.3 |
0.0 |