PDB Chemical Component HHK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HHK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.453 1.465
N H 1.021 0.995
N H2 1.020 0.995
CA CB 1.529 1.534
CA C 1.529 1.519
CA HA 1.091 1.095
CB CG 1.530 1.533
CB HB2 1.090 1.098
CB HB3 1.091 1.098
CG CD 1.531 1.531
CG HG2 1.090 1.095
CG HG3 1.090 1.097
CD CE 1.529 1.532
CD HD2 1.089 1.097
CD HD3 1.090 1.095
CE CZ 1.539 1.532
CE HE2 1.089 1.097
CE HE3 1.091 1.098
CZ CT 1.539 1.530
CZ HZ2 1.068 1.096
CZ HZ3 1.071 1.098
CT NH 1.479 1.459
CT HT2 1.069 1.096
CT HT1 1.070 1.094
NH HH1 1.020 0.997
NH HH2 1.020 0.997
C O 1.230 1.225
C OXT   1.358
OXT HXT   0.981

Bond Angles for HHK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N H 110.4 117.8
CA N H2 111.9 117.9
N CA CB 110.4 109.5
N CA C 109.3 106.6
N CA HA 107.4 107.8
H N H2 111.8 122.8
CB CA C 113.8 111.3
CB CA HA 107.2 111.1
CA CB CG 111.1 112.8
CA CB HB2 109.8 110.2
CA CB HB3 109.6 109.3
C CA HA 108.5 110.3
CA C O 120.5 125.1
CA C OXT   112.3
CG CB HB2 109.7 109.0
CG CB HB3 109.7 108.6
CB CG CD 110.9 111.1
CB CG HG2 109.7 109.4
CB CG HG3 109.6 109.6
HB2 CB HB3 106.9 106.8
CD CG HG2 109.7 109.5
CD CG HG3 109.8 109.6
CG CD CE 111.0 113.4
CG CD HD2 109.6 109.1
CG CD HD3 109.7 109.8
HG2 CG HG3 107.1 107.6
CE CD HD2 109.7 107.9
CE CD HD3 109.8 110.1
CD CE CZ 109.8 115.9
CD CE HE2 109.9 108.4
CD CE HE3 109.8 108.8
HD2 CD HD3 107.0 106.2
CZ CE HE2 110.2 108.8
CZ CE HE3 110.2 108.3
CE CZ CT 109.5 113.4
CE CZ HZ2 109.4 109.9
CE CZ HZ3 109.5 107.8
HE2 CE HE3 107.1 106.3
CT CZ HZ2 109.6 110.1
CT CZ HZ3 109.4 109.2
CZ CT NH 109.5 110.9
CZ CT HT2 109.4 110.3
CZ CT HT1 109.5 110.7
HZ2 CZ HZ3 109.4 106.2
NH CT HT2 109.5 108.9
NH CT HT1 109.5 108.3
CT NH HH1 109.5 118.1
CT NH HH2 112.2 118.1
HT2 CT HT1 109.4 107.5
HH1 NH HH2 112.2 122.4
O C OXT   122.7
C OXT HXT   115.5

Torsion Angles for HHK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H N CA H2 125.2 166.6
CB CA N C 234.1 239.5
CB CA N HA 116.5 121.0
N CA CB CG 247.3 295.6
N CA CB HB2 8.8 57.6
N CA CB HB3 126.0 174.7
C CA N HA 242.5 241.6
N CA C O 140.1 356.8
N CA C OXT   175.6
CA N H H2 234.7 194.1
H N CA CB 180.0 321.2
H N CA C 305.9 81.7
H N CA HA 63.4 200.1
CA N H2 H 124.5 165.9
H2 N CA CB 54.8 154.6
H2 N CA C 180.7 275.1
H2 N CA HA 298.2 33.6
CB CA N H 180.0 321.2
CB CA N H2 54.8 154.6
N CA CB C 123.4 117.6
N CA CB HA 243.3 241.0
C CA CB HA 119.9 123.3
CB CA C O 264.1 116.2
CB CA C OXT   295.0
CG CB CA HB2 238.5 237.9
CG CB CA HB3 121.4 120.8
CA CB CG CD 89.3 182.8
CA CB CG HG2 210.6 61.7
CA CB CG HG3 327.9 304.0
HB2 CB CA HB3 242.9 242.9
C CA N H 305.9 81.7
C CA N H2 180.7 275.1
N CA C CB 236.0 240.6
N CA C HA 116.8 116.8
CB CA C HA 240.8 236.2
C CA CB CG 124.0 177.9
C CA CB HB2 245.4 300.0
C CA CB HB3 2.6 57.1
O C CA OXT   181.2
CA C OXT HXT   181.3
HA CA N H 63.4 200.1
HA CA N H2 298.2 33.6
N CA HA CB 118.7 120.0
N CA HA C 241.9 243.9
CB CA HA C 123.3 123.9
HA CA CB CG 4.0 54.6
HA CA CB HB2 125.5 176.7
HA CA CB HB3 242.6 293.8
HA CA C O 23.3 240.0
HA CA C OXT   58.8
CG CB CA C 124.0 177.9
CG CB CA HA 4.0 54.6
CA CB CG HB2 121.5 122.7
CA CB CG HB3 238.7 238.8
HB2 CB CG HB3 117.1 116.0
CD CG CB HG2 238.7 121.0
CD CG CB HG3 121.4 238.7
CB CG CD CE 81.1 179.0
CB CG CD HD2 202.5 58.6
CB CG CD HD3 319.7 302.6
HG2 CG CB HG3 242.7 117.7
HB2 CB CA C 245.4 300.0
HB2 CB CA HA 125.5 176.7
CA CB HB2 CG 237.7 235.7
CA CB HB2 HB3 118.8 118.6
CG CB HB2 HB3 241.1 242.9
HB2 CB CG CD 327.7 60.0
HB2 CB CG HG2 89.0 299.0
HB2 CB CG HG3 206.3 181.3
HB3 CB CA C 2.6 57.1
HB3 CB CA HA 242.6 293.8
CA CB HB3 CG 122.2 123.4
CA CB HB3 HB2 241.1 240.8
CG CB HB3 HB2 118.9 117.4
HB3 CB CG CD 210.6 304.0
HB3 CB CG HG2 331.9 183.0
HB3 CB CG HG3 89.2 65.3
CD CG CB HB2 327.7 60.0
CD CG CB HB3 210.6 304.0
CB CG CD HG2 121.3 239.0
CB CG CD HG3 238.7 121.3
HG2 CG CD HG3 117.4 242.3
CE CD CG HD2 238.6 120.3
CE CD CG HD3 121.5 236.4
CG CD CE CZ 268.6 177.4
CG CD CE HE2 29.9 300.0
CG CD CE HE3 147.3 55.1
HD2 CD CG HD3 242.9 116.0
HG2 CG CB HB2 89.0 299.0
HG2 CG CB HB3 331.9 183.0
CB CG HG2 CD 237.9 122.0
CB CG HG2 HG3 118.9 241.0
CD CG HG2 HG3 241.0 119.0
HG2 CG CD CE 319.8 300.0
HG2 CG CD HD2 81.2 179.6
HG2 CG CD HD3 198.3 63.6
HG3 CG CB HB2 206.3 181.3
HG3 CG CB HB3 89.2 65.3
CB CG HG3 CD 122.1 237.8
CB CG HG3 HG2 241.1 118.9
CD CG HG3 HG2 119.0 241.1
HG3 CG CD CE 202.4 57.7
HG3 CG CD HD2 323.8 297.4
HG3 CG CD HD3 81.0 181.4
CE CD CG HG2 319.8 300.0
CE CD CG HG3 202.4 57.7
CG CD CE HD2 121.3 239.0
CG CD CE HD3 238.6 123.5
HD2 CD CE HD3 117.3 244.5
CZ CE CD HE2 238.7 237.4
CZ CE CD HE3 121.2 122.3
CD CE CZ CT 113.7 183.7
CD CE CZ HZ2 233.8 60.0
CD CE CZ HZ3 353.7 304.7
HE2 CE CD HE3 242.5 244.9
HD2 CD CG HG2 81.2 179.6
HD2 CD CG HG3 323.8 297.4
CG CD HD2 CE 237.9 123.7
CG CD HD2 HD3 118.8 241.7
CE CD HD2 HD3 240.9 118.0
HD2 CD CE CZ 147.3 298.4
HD2 CD CE HE2 268.6 60.9
HD2 CD CE HE3 26.1 176.1
HD3 CD CG HG2 198.3 63.6
HD3 CD CG HG3 81.0 181.4
CG CD HD3 CE 122.2 234.4
CG CD HD3 HD2 241.2 117.8
CE CD HD3 HD2 119.0 243.4
HD3 CD CE CZ 30.0 53.9
HD3 CD CE HE2 151.3 176.5
HD3 CD CE HE3 268.8 291.6
CZ CE CD HD2 147.3 298.4
CZ CE CD HD3 30.0 53.9
CD CE CZ HE2 121.1 122.3
CD CE CZ HE3 239.0 237.4
HE2 CE CZ HE3 117.9 115.1
CT CZ CE HZ2 239.9 123.7
CT CZ CE HZ3 120.0 239.0
CE CZ CT NH 225.8 180.8
CE CZ CT HT2 345.9 60.0
CE CZ CT HT1 105.8 301.1
HZ2 CZ CE HZ3 240.1 115.3
HE2 CE CD HD2 268.6 60.9
HE2 CE CD HD3 151.3 176.5
CD CE HE2 CZ 238.9 233.2
CD CE HE2 HE3 119.1 116.8
CZ CE HE2 HE3 240.2 243.6
HE2 CE CZ CT 352.6 61.3
HE2 CE CZ HZ2 112.7 297.7
HE2 CE CZ HZ3 232.6 182.4
HE3 CE CD HD2 26.1 176.1
HE3 CE CD HD3 268.8 291.6
CD CE HE3 CZ 121.0 126.8
CD CE HE3 HE2 240.8 243.5
CZ CE HE3 HE2 119.8 116.7
HE3 CE CZ CT 234.7 306.2
HE3 CE CZ HZ2 354.8 182.6
HE3 CE CZ HZ3 114.7 67.3
CT CZ CE HE2 352.6 61.3
CT CZ CE HE3 234.7 306.2
CE CZ CT HZ2 120.0 236.4
CE CZ CT HZ3 240.0 120.2
HZ2 CZ CT HZ3 120.0 243.8
NH CT CZ HT2 240.0 120.8
NH CT CZ HT1 120.1 239.7
CZ CT NH HH1 180.0 326.4
CZ CT NH HH2 54.7 159.8
HT2 CT CZ HT1 240.1 118.9
HZ2 CZ CE HE2 112.7 297.7
HZ2 CZ CE HE3 354.8 182.6
CE CZ HZ2 CT 239.9 125.6
CE CZ HZ2 HZ3 119.9 243.6
CT CZ HZ2 HZ3 240.0 118.1
HZ2 CZ CT NH 105.9 304.4
HZ2 CZ CT HT2 225.9 183.6
HZ2 CZ CT HT1 345.8 64.7
HZ3 CZ CE HE2 232.6 182.4
HZ3 CZ CE HE3 114.7 67.3
CE CZ HZ3 CT 120.0 236.4
CE CZ HZ3 HZ2 240.1 117.8
CT CZ HZ3 HZ2 120.1 241.4
HZ3 CZ CT NH 345.9 60.6
HZ3 CZ CT HT2 105.9 299.8
HZ3 CZ CT HT1 225.8 180.9
NH CT CZ HZ2 105.9 304.4
NH CT CZ HZ3 345.9 60.6
CZ CT NH HT2 119.9 238.4
CZ CT NH HT1 239.9 121.7
HT2 CT NH HT1 120.0 243.3
HH1 NH CT HH2 125.3 166.7
HT2 CT CZ HZ2 225.9 183.6
HT2 CT CZ HZ3 105.9 299.8
CZ CT HT2 NH 240.0 122.0
CZ CT HT2 HT1 120.0 239.2
NH CT HT2 HT1 239.9 117.2
HT2 CT NH HH1 60.1 88.0
HT2 CT NH HH2 294.8 281.3
HT1 CT CZ HZ2 345.8 64.7
HT1 CT CZ HZ3 225.8 180.9
CZ CT HT1 NH 120.1 238.1
CZ CT HT1 HT2 240.1 120.5
NH CT HT1 HT2 120.1 242.4
HT1 CT NH HH1 300.1 204.7
HT1 CT NH HH2 174.8 38.0
HH1 NH CT HT2 60.1 88.0
HH1 NH CT HT1 300.1 204.7
CT NH HH1 HH2 234.7 194.0
HH2 NH CT HT2 294.8 281.3
HH2 NH CT HT1 174.8 38.0
CT NH HH2 HH1 123.8 166.0
O C CA HA 23.3 240.0
CA C O OXT   178.6
O C OXT HXT   0.0
OXT C CA HA   58.8
CA C OXT O   181.2