PDB Chemical Component HH2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HH2

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.324	1.318
N1	C9	1.438	1.326
C2	C3	1.510	1.390
C2	C11	1.503	1.506
C3	N4	1.478	1.318
C3	H31	1.080	1.081
N4	C10	1.376	1.334
N5	C6	1.390	1.310
N5	C10	1.383	1.346
C6	N6	1.380	1.371
C6	N7	1.337	1.362
N6	HN61	1.000	0.969
N6	HN62	1.000	0.970
N7	C8	1.333	1.354
N7	HN7	1.000	0.970
C8	O8	1.352	1.218
C8	C9	1.396	1.472
C9	C10	1.386	1.413
C11	O4	1.424	1.428
C11	H111	1.100	1.090
C11	H112	1.100	1.090
O4	P1	1.622	1.610
P1	O1P	1.486	1.480
P1	O2P	1.487	1.609
P1	O3P	1.622	1.609
O2P	HOP2	0.950	0.967
O3P	P2	1.628	1.610
P2	O4P	1.491	1.480
P2	O5P	1.498	1.610
P2	O6P	1.497	1.609
O5P	HOP5	0.950	0.967
O6P	HOP6	0.951	0.967

Bond Angles for HH2

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C9	122.5	119.7
N1	C2	C3	121.9	120.5
N1	C2	C11	117.4	119.8
N1	C9	C8	123.3	121.8
N1	C9	C10	116.7	120.2
C3	C2	C11	120.8	119.8
C2	C3	N4	114.8	120.8
C2	C3	H31	122.6	119.6
C2	C11	O4	110.1	109.5
C2	C11	H111	109.1	109.5
C2	C11	H112	109.3	109.5
N4	C3	H31	122.6	119.6
C3	N4	C10	118.5	119.6
N4	C10	N5	117.3	121.5
N4	C10	C9	125.6	119.3
C6	N5	C10	119.9	121.7
N5	C6	N6	113.3	118.4
N5	C6	N7	122.6	123.1
N5	C10	C9	117.1	119.2
N6	C6	N7	124.1	118.5
C6	N6	HN61	126.0	120.0
C6	N6	HN62	108.1	119.9
C6	N7	C8	118.1	120.4
C6	N7	HN7	121.0	119.8
HN61	N6	HN62	125.9	120.1
C8	N7	HN7	120.9	119.8
N7	C8	O8	118.1	121.2
N7	C8	C9	122.3	117.5
O8	C8	C9	119.6	121.2
C8	C9	C10	119.9	118.0
O4	C11	H111	109.1	109.4
O4	C11	H112	109.2	109.5
C11	O4	P1	123.2	106.9
H111	C11	H112	110.0	109.4
O4	P1	O1P	109.3	109.5
O4	P1	O2P	109.1	109.5
O4	P1	O3P	104.7	109.5
O1P	P1	O2P	115.3	109.5
O1P	P1	O3P	109.0	109.5
O2P	P1	O3P	108.9	109.5
P1	O2P	HOP2	109.5	106.8
P1	O3P	P2	130.6	106.8
O3P	P2	O4P	106.3	109.5
O3P	P2	O5P	105.5	109.5
O3P	P2	O6P	107.6	109.5
O4P	P2	O5P	111.9	109.4
O4P	P2	O6P	112.6	109.5
O5P	P2	O6P	112.3	109.5
P2	O5P	HOP5	109.5	106.8
P2	O6P	HOP6	109.5	106.8

Torsion Angles for HH2

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C9	C8	184.0	180.0
C2	N1	C9	C10	1.1	0.0
C3	C2	N1	C11	180.5	180.0
N1	C2	C3	N4	2.4	360.0
N1	C2	C3	H31	182.4	180.0
N1	C2	C11	O4	183.7	180.0
N1	C2	C11	H111	64.0	300.0
N1	C2	C11	H112	303.7	60.0
C9	N1	C2	C3	357.7	0.0
C9	N1	C2	C11	177.3	180.0
N4	C10	C9	N1	359.8	360.0
N5	C10	C9	N1	181.5	180.0
N7	C8	C9	N1	179.1	179.8
O8	C8	C9	N1	0.6	360.0
C8	C9	N1	C10	182.9	180.0
C3	C2	N1	C9	357.7	0.0
N1	C2	C3	C11	179.5	180.0
C3	C2	C11	O4	3.3	0.1
C3	C2	C11	H111	243.5	120.0
C3	C2	C11	H112	123.3	240.0
N4	C3	C2	H31	180.0	180.0
C2	C3	N4	C10	358.5	0.0
C11	C2	N1	C9	177.3	180.0
N1	C2	C11	C3	180.5	180.0
C11	C2	C3	N4	182.9	180.0
C11	C2	C3	H31	2.9	360.0
O4	C11	C2	H111	119.8	240.0
O4	C11	C2	H112	240.0	120.0
C2	C11	O4	P1	205.8	180.0
H111	C11	C2	H112	120.3	240.0
N4	C3	C2	C11	182.9	180.0
C2	C3	N4	H31	180.0	180.0
C3	N4	C10	N5	178.9	180.0
C3	N4	C10	C9	0.5	0.0
H31	C3	C2	C11	2.9	360.0
C2	C3	H31	N4	180.0	180.0
H31	C3	N4	C10	178.5	180.0
N1	C9	C10	N4	359.8	360.0
C10	N4	C3	H31	178.5	180.0
C6	N5	C10	N4	181.6	179.9
N5	C10	N4	C9	178.4	180.0
C8	C9	C10	N4	177.1	180.0
N4	C10	N5	C6	181.6	179.9
C6	N5	C10	C9	0.1	359.9
N6	C6	N5	N7	179.2	179.6
N5	C6	N6	HN61	0.0	360.0
N5	C6	N6	HN62	180.0	179.8
N5	C6	N7	C8	0.2	359.4
N5	C6	N7	HN7	180.2	179.9
N1	C9	C10	N5	181.5	180.0
N4	C10	N5	C9	181.5	180.0
C10	N5	C6	N6	179.7	180.0
C10	N5	C6	N7	0.5	0.4
C8	C9	C10	N5	358.7	359.9
N6	C6	N5	C10	179.7	180.0
N5	C6	N6	N7	180.8	180.4
N6	C6	N7	C8	181.1	179.8
N6	C6	N7	HN7	1.2	0.3
HN61	N6	C6	HN62	180.0	180.2
N7	C6	N5	C10	0.5	0.4
N5	C6	N7	N6	179.1	179.6
N7	C6	N6	HN61	179.2	179.6
N7	C6	N6	HN62	359.2	359.4
C8	N7	C6	HN7	180.0	179.5
C6	N7	C8	O8	177.1	180.3
C6	N7	C8	C9	358.5	0.5
HN61	N6	C6	N7	179.2	179.6
C6	N6	HN61	HN62	180.0	179.8
HN62	N6	C6	N7	359.2	359.4
C6	N6	HN62	HN61	180.0	180.2
N1	C9	C8	N7	179.1	179.8
C6	N7	C8	HN7	180.0	180.5
O8	C8	N7	C9	178.6	179.9
N7	C8	C9	C10	2.1	359.9
C6	N7	HN7	C8	180.0	179.5
HN7	N7	C8	O8	357.0	359.8
HN7	N7	C8	C9	178.4	180.0
N1	C9	C8	O8	0.6	360.0
O8	C8	N7	HN7	357.0	359.8
N7	C8	O8	C9	181.4	180.1
O8	C8	C9	C10	183.6	180.0
N1	C9	C8	C10	177.0	180.0
N4	C10	C9	C8	177.1	180.0
N5	C10	C9	C8	358.7	359.9
C9	C8	N7	HN7	178.4	180.0
N7	C8	C9	O8	178.6	179.9
N1	C9	C10	C8	182.8	180.0
N4	C10	C9	N5	178.4	180.0
C2	C11	O4	H111	240.3	120.0
C2	C11	O4	H112	120.0	240.0
H111	C11	O4	H112	239.7	119.9
C11	O4	P1	O1P	304.3	60.0
C11	O4	P1	O2P	177.4	300.0
C11	O4	P1	O3P	61.0	180.0
C2	C11	H111	O4	120.4	240.0
C2	C11	H111	H112	240.2	120.0
O4	C11	H111	H112	119.8	240.0
H111	C11	O4	P1	325.5	60.0
C2	C11	H112	O4	239.5	120.1
C2	C11	H112	H111	119.7	240.0
O4	C11	H112	H111	240.2	119.9
H112	C11	O4	P1	85.8	300.0
P1	O4	C11	H111	325.5	60.0
P1	O4	C11	H112	85.8	300.0
O1P	P1	O4	O2P	126.9	120.0
O1P	P1	O4	O3P	243.3	240.0
O2P	P1	O4	O3P	116.5	120.0
O4	P1	O2P	HOP2	4.5	300.0
O4	P1	O3P	P2	41.9	180.0
O4	P1	O1P	O2P	236.7	240.0
O4	P1	O1P	O3P	113.9	120.1
O2P	P1	O1P	O3P	237.1	240.0
O1P	P1	O2P	HOP2	241.1	180.0
O1P	P1	O3P	P2	158.7	300.0
O4	P1	O2P	O1P	123.4	120.0
O4	P1	O2P	O3P	246.3	240.0
O1P	P1	O2P	O3P	122.9	120.0
O2P	P1	O3P	P2	285.3	60.0
O4	P1	O3P	O1P	243.2	240.0
O4	P1	O3P	O2P	116.6	120.0
O1P	P1	O3P	O2P	233.4	240.0
O3P	P1	O2P	HOP2	118.2	60.0
P1	O3P	P2	O4P	271.2	60.1
P1	O3P	P2	O5P	152.2	180.0
P1	O3P	P2	O6P	32.1	300.0
HOP2	O2P	P1	O3P	118.2	60.0
O4P	P2	O3P	O5P	119.1	240.1
O4P	P2	O3P	O6P	239.1	120.1
O5P	P2	O3P	O6P	120.1	240.0
O3P	P2	O5P	HOP5	276.2	180.0
O3P	P2	O6P	HOP6	250.4	299.9
O3P	P2	O4P	O5P	245.2	119.9
O3P	P2	O4P	O6P	117.6	240.0
O5P	P2	O4P	O6P	232.4	120.0
O4P	P2	O5P	HOP5	160.9	300.0
O4P	P2	O6P	HOP6	7.2	179.9
O3P	P2	O5P	O4P	115.3	240.1
O3P	P2	O5P	O6P	243.1	120.0
O4P	P2	O5P	O6P	127.8	240.0
O5P	P2	O6P	HOP6	134.7	59.9
O3P	P2	O6P	O4P	243.2	120.0
O3P	P2	O6P	O5P	115.7	240.0
O4P	P2	O6P	O5P	232.5	120.0
O6P	P2	O5P	HOP5	33.1	60.0
HOP5	O5P	P2	O6P	33.1	60.0