PDB Chemical Component HGM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HGM

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	O	1.228	1.209
C	CA	1.523	1.506
C	OXT	1.431	1.342
N	CA	1.480	1.469
N	CH3	1.474	1.469
N	H	1.000	1.009
C1	C2	1.392	1.383
C1	C5	1.394	1.382
C1	CA	1.480	1.507
C2	C3	1.400	1.381
C2	H1	1.080	1.080
C3	C4	1.381	1.387
C3	H3	1.080	1.080
C4	O4	1.362	1.359
C4	C6	1.384	1.387
O4	HO4	0.950	0.967
C5	C6	1.391	1.382
C5	H5	1.080	1.080
C6	H6	1.080	1.080
CA	HA	1.099	1.090
CH3	HH3	1.099	1.090
CH3	HH3A	1.100	1.089
CH3	HH3B	1.100	1.090
OXT	HXT	0.950	0.967

Bond Angles for HGM

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O	C	CA	120.1	120.0
O	C	OXT	120.0	120.0
CA	C	OXT	119.9	120.0
C	CA	N	109.2	109.5
C	CA	C1	112.8	109.5
C	CA	HA	109.1	109.5
C	OXT	HXT	109.5	117.0
CA	N	CH3	110.3	111.0
CA	N	H	109.3	111.0
N	CA	C1	106.5	109.4
N	CA	HA	109.7	109.5
CH3	N	H	109.3	111.1
N	CH3	HH3	109.5	109.4
N	CH3	HH3A	109.5	109.5
N	CH3	HH3B	109.5	109.4
C2	C1	C5	119.6	120.1
C2	C1	CA	122.1	119.9
C1	C2	C3	118.9	120.1
C1	C2	H1	120.6	119.9
C5	C1	CA	118.3	120.0
C1	C5	C6	121.0	120.0
C1	C5	H5	119.5	120.0
C1	CA	HA	109.6	109.5
C3	C2	H1	120.5	120.0
C2	C3	C4	121.1	119.9
C2	C3	H3	119.5	120.0
C4	C3	H3	119.4	120.1
C3	C4	O4	119.6	120.0
C3	C4	C6	120.1	119.9
O4	C4	C6	120.3	120.0
C4	O4	HO4	109.5	114.0
C4	C6	C5	119.3	119.9
C4	C6	H6	120.4	120.0
C6	C5	H5	119.5	119.9
C5	C6	H6	120.4	120.0
HH3	CH3	HH3A	109.4	109.5
HH3	CH3	HH3B	109.5	109.4
HH3A	CH3	HH3B	109.5	109.5

Torsion Angles for HGM

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CA	C	O	OXT	180.0	180.3
O	C	CA	N	23.6	0.0
O	C	CA	C1	265.5	240.0
O	C	CA	HA	143.4	120.0
O	C	OXT	HXT	360.0	0.1
O	C	CA	OXT	180.0	179.7
CA	C	OXT	HXT	180.0	179.8
C	CA	N	CH3	154.8	85.0
C	CA	N	H	275.0	209.0
N	CA	C	C1	118.2	120.0
N	CA	C	HA	240.2	240.0
C2	C1	CA	C	23.0	260.0
C5	C1	CA	C	202.3	79.7
C1	CA	C	HA	122.0	120.0
O	C	OXT	CA	180.0	180.3
OXT	C	CA	N	203.6	180.3
OXT	C	CA	C1	85.4	60.3
OXT	C	CA	HA	323.4	300.3
N	CA	C	OXT	203.6	180.3
C	CA	N	C1	238.0	240.0
C	CA	N	HA	119.5	120.0
CH3	N	CA	H	239.9	236.0
CA	N	CH3	HH3	180.0	180.0
CA	N	CH3	HH3A	300.0	300.0
CA	N	CH3	HH3B	60.0	60.1
C2	C1	CA	N	263.2	140.0
C5	C1	CA	N	82.6	319.7
C1	CA	N	HA	241.5	240.0
CA	N	CH3	H	120.1	124.0
CH3	N	CA	C1	276.9	205.0
CH3	N	CA	HA	35.4	325.0
HH3	CH3	N	HH3A	240.0	240.0
HH3	CH3	N	HH3B	120.0	119.9
HH3A	CH3	N	HH3B	240.0	240.0
CA	N	H	CH3	239.3	236.0
H	N	CA	C1	37.0	329.0
H	N	CA	HA	155.5	89.0
H	N	CH3	HH3	59.9	56.0
H	N	CH3	HH3A	179.9	176.0
H	N	CH3	HH3B	299.9	296.1
C	CA	C1	C2	23.0	260.0
N	CA	C1	C2	263.2	140.0
C5	C1	C2	CA	180.7	180.3
C2	C1	C5	C6	0.0	360.0
C2	C1	C5	H5	180.0	180.0
C2	C1	CA	HA	144.7	20.0
C3	C2	C1	H1	180.0	180.0
C1	C2	C3	C4	359.1	0.0
C1	C2	C3	H3	179.1	180.0
C	CA	C1	C5	202.3	79.7
N	CA	C1	C5	82.6	319.7
C2	C1	C5	CA	179.4	179.7
C5	C1	C2	C3	0.5	360.0
C5	C1	C2	H1	180.5	180.0
C5	C1	CA	HA	324.1	199.7
C4	C6	C5	C1	359.7	0.0
C6	C5	C1	H5	180.0	179.9
C1	C5	C6	H6	179.7	180.0
C1	CA	C	OXT	85.4	60.3
C	CA	C1	N	119.7	120.0
C	CA	C1	HA	238.3	240.0
C1	CA	N	CH3	276.9	205.0
C1	CA	N	H	37.0	329.0
N	CA	C1	HA	118.5	120.0
C2	C1	CA	C5	180.7	180.3
CA	C1	C2	C3	179.9	179.7
CA	C1	C2	H1	359.9	359.7
CA	C1	C5	C6	180.7	180.3
CA	C1	C5	H5	0.7	0.3
C3	C2	C1	C5	0.5	360.0
C3	C2	C1	CA	179.9	179.7
C1	C2	C3	H1	180.0	180.0
C4	C3	C2	H3	180.0	180.1
C2	C3	C4	O4	180.4	180.0
C2	C3	C4	C6	0.6	359.9
H1	C2	C1	C5	180.5	180.0
H1	C2	C1	CA	359.9	359.7
C1	C2	H1	C3	180.0	180.0
H1	C2	C3	C4	179.1	180.0
H1	C2	C3	H3	359.1	360.0
C4	C3	C2	H1	179.1	180.0
C2	C3	C4	H3	180.0	179.9
O4	C4	C3	C6	179.8	180.1
C3	C4	O4	HO4	180.0	90.0
C3	C4	C6	C5	360.0	0.0
C3	C4	C6	H6	180.0	180.0
H3	C3	C2	H1	359.1	360.0
C2	C3	H3	C4	180.0	180.1
H3	C3	C4	O4	0.4	0.1
H3	C3	C4	C6	180.6	180.0
O4	C4	C3	H3	0.4	0.1
C3	C4	O4	C6	180.2	179.9
O4	C4	C6	C5	180.2	180.0
O4	C4	C6	H6	0.1	360.0
C1	C5	C6	C4	359.7	0.0
C6	C4	C3	H3	180.6	180.0
C3	C4	C6	O4	179.8	180.1
C6	C4	O4	HO4	359.8	270.0
C4	C6	C5	H5	179.7	180.0
C5	C6	C4	H6	180.0	180.0
HO4	O4	C4	C6	359.8	270.0
C6	C5	C1	CA	180.7	180.3
C1	C5	C6	H5	180.0	180.1
C4	C6	C5	H6	180.0	180.0
H5	C5	C1	CA	0.7	0.3
C1	C5	H5	C6	180.0	179.9
H5	C5	C6	H6	359.7	360.0
C4	C6	H6	C5	180.0	180.0
H6	C6	C5	H5	359.7	360.0
HA	CA	C	OXT	323.4	300.3
C	CA	HA	N	240.5	240.0
C	CA	HA	C1	123.9	120.0
HA	CA	N	CH3	35.4	325.0
HA	CA	N	H	155.5	89.0
N	CA	HA	C1	243.5	240.1
HH3	CH3	N	H	59.9	56.0
N	CH3	HH3	HH3A	120.0	120.1
N	CH3	HH3	HH3B	240.0	240.1
HH3A	CH3	HH3	HH3B	120.0	120.0
HH3A	CH3	N	H	179.9	176.0
N	CH3	HH3A	HH3	240.0	240.0
N	CH3	HH3A	HH3B	120.0	120.0
HH3	CH3	HH3A	HH3B	240.0	240.0
HH3B	CH3	N	H	299.9	296.1
N	CH3	HH3B	HH3	120.0	119.9
N	CH3	HH3B	HH3A	240.0	239.9
HH3	CH3	HH3B	HH3A	120.0	120.0