PDB Chemical Component HGB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HGB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.226 1.346
C1 O2 1.236 1.215
C1 C2 1.426 1.477
C3 C5 1.413 1.379
C3 C2 1.415 1.396
C3 HC3 1.080 1.080
C5 C7 1.412 1.384
C5 HC5 1.080 1.080
C7 HG 2.040 2.099
C7 C6 1.411 1.383
HG O3   1.950
C6 C4 1.414 1.380
C6 HC6 1.080 1.080
C4 C2 1.419 1.396
C4 HC4 1.080 1.080
O1 HO11 0.950 0.967
O3 HO31   0.967

Bond Angles for HGB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 O2 118.9 120.0
O1 C1 C2 120.5 120.0
C1 O1 HO11 109.5 120.1
O2 C1 C2 120.6 120.0
C1 C2 C3 120.2 120.2
C1 C2 C4 120.7 120.1
C5 C3 C2 120.3 119.9
C5 C3 HC3 74.9 120.1
C3 C5 C7 120.4 120.1
C3 C5 HC5 120.0 120.0
C2 C3 HC3 164.7 120.0
C3 C2 C4 119.1 119.7
C7 C5 HC5 119.7 119.9
C5 C7 HG 119.4 119.9
C5 C7 C6 119.6 120.3
HG C7 C6 121.0 119.8
C7 HG O3   179.9
C7 C6 C4 120.0 120.2
C7 C6 HC6 164.9 119.9
HG O3 HO31   106.7
C4 C6 HC6 75.0 119.9
C6 C4 C2 120.5 119.8
C6 C4 HC4 119.9 120.1
C2 C4 HC4 119.5 120.0

Torsion Angles for HGB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 C1 O1 C2 180.4 180.0
O1 C1 C2 C3 179.6 180.0
O1 C1 C2 C4 0.7 0.0
O1 C1 O2 C2 179.6 180.0
O2 C1 O1 HO11 360.0 0.0
O2 C1 C2 C3 359.1 -0.0
O2 C1 C2 C4 180.3 180.0
O1 C1 C2 O2 180.4 180.0
C2 C1 O1 HO11 179.6 180.0
C5 C3 C2 C1 180.2 180.0
C1 C2 C3 HC3 1.2 359.9
C3 C2 C1 C4 178.8 180.0
C6 C4 C2 C1 179.8 179.8
C1 C2 C4 HC4 359.2 0.0
C1 C2 C3 C5 180.2 180.0
C2 C3 C5 HC3 180.3 179.9
C5 C3 C2 C4 359.1 0.0
C7 C5 C3 HC5 180.5 180.1
C3 C5 C7 HG 179.7 180.0
C3 C5 C7 C6 359.3 0.2
C1 C2 C3 C4 181.2 180.0
C5 C3 C2 HC3 179.0 180.1
C2 C3 C5 C7 0.8 -0.0
C2 C3 C5 HC5 180.3 179.9
C6 C4 C2 C3 0.9 359.7
C3 C2 C4 HC4 180.3 180.0
C5 C3 HC3 C2 180.9 179.9
HC3 C3 C5 C7 180.6 180.1
HC3 C3 C5 HC5 0.1 0.0
HC3 C3 C2 C4 180.0 180.0
C7 C5 C3 C2 0.8 -0.0
C7 C5 C3 HC3 180.6 180.1
C3 C5 C7 HC5 179.5 179.9
HG C7 C5 C6 180.4 179.8
C5 C7 HG O3   360.0
C5 C7 C6 C4 0.7 359.6
C5 C7 C6 HC6 180.1 180.1
HC5 C5 C3 C2 180.3 179.9
HC5 C5 C3 HC3 0.1 0.0
C3 C5 HC5 C7 180.5 180.1
HC5 C5 C7 HG 0.2 0.1
HC5 C5 C7 C6 179.8 180.3
HG C7 C5 HC5 0.2 0.1
C5 C7 HG C6 179.6 180.2
HG C7 C6 C4 180.3 179.8
HG C7 C6 HC6 359.7 0.3
C7 HG O3 HO31   179.9
C6 C7 C5 HC5 179.8 180.3
C5 C7 C6 HG 180.4 179.8
C6 C7 HG O3   179.8
C4 C6 C7 HC6 180.6 179.5
C7 C6 C4 C2 359.2 0.5
C7 C6 C4 HC4 179.8 180.2
O3 HG C7 C6   179.8
C1 C2 C4 C6 179.8 179.8
C3 C2 C4 C6 0.9 359.7
C7 C6 C4 HC6 179.8 180.5
C2 C4 C6 HC4 179.4 180.3
C7 C6 HC6 C4 180.6 179.5
HC6 C6 C4 C2 179.3 180.0
HC6 C6 C4 HC4 359.9 359.7
C1 C2 C4 C3 178.8 180.0
C4 C2 C3 HC3 180.0 180.0
C2 C4 C6 HC6 179.3 180.0
C6 C4 C2 HC4 180.6 179.7
HC4 C4 C6 HC6 359.9 359.7
C6 C4 HC4 C2 179.4 180.3
HO11 O1 C1 O2 360.0 0.0
HO11 O1 C1 C2 179.6 180.0