PDB Chemical Component HFV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HFV

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O20 C1 1.250 1.209
C1 O19 1.261 1.342
C1 C2 1.519 1.507
O19 H19 0.949 0.967
C2 N14 1.502 1.469
C2 C3 1.519 1.531
C2 H2 1.115 1.089
N14 H141 1.020 1.009
N14 H142 1.020 1.009
C3 C4 1.526 1.530
C3 H3C1 1.115 1.090
C3 H3C2 1.115 1.090
C4 C7 1.545 1.531
C4 H4C1 1.116 1.090
C4 H4C2 1.115 1.090
C7 C10 1.486 1.507
C7 H7C1 1.115 1.090
C7 H7C2 1.115 1.090
C10 O15 1.228 1.212
C10 N11 1.345 1.348
N11 C12 1.441 1.466
N11 H11 1.020 0.970
C12 C16 1.521 1.530
C12 C13 1.521 1.506
C12 H12 1.115 1.089
C16 S17 1.839 1.814
C16 H161 1.115 1.090
C16 H162 1.115 1.090
S17 H17 0.950 1.345
C13 O18 1.244 1.212
C13 N29 1.311 1.348
N29 C30 1.453 1.465
N29 H29 1.020 0.970
C30 C31 1.544 1.507
C30 C32 1.523 1.529
C30 H30 1.115 1.090
C31 O42 1.221 1.208
C31 O43 1.251 1.342
O43 H43 0.951 0.968
C32 C37 1.531 1.531
C32 C33 1.538 1.530
C32 H32 1.115 1.090
C37 F24 1.354 1.399
C37 F25 1.287 1.400
C37 F26 1.293 1.398
C33 F21 1.368 1.399
C33 F23 1.287 1.400
C33 F22 1.350 1.399

Bond Angles for HFV

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O20 C1 O19 124.5 120.0
O20 C1 C2 117.8 120.0
O19 C1 C2 117.7 120.0
C1 O19 H19 124.5 120.0
C1 C2 N14 108.3 109.5
C1 C2 C3 109.1 109.5
C1 C2 H2 109.8 109.5
N14 C2 C3 110.1 109.4
N14 C2 H2 109.8 109.5
C2 N14 H141 128.0 106.6
C2 N14 H142 128.0 106.7
C3 C2 H2 109.8 109.5
C2 C3 C4 114.0 109.5
C2 C3 H3C1 110.6 109.5
C2 C3 H3C2 110.5 109.5
H141 N14 H142 80.1 106.7
C4 C3 H3C1 110.6 109.5
C4 C3 H3C2 110.6 109.5
C3 C4 C7 107.4 109.5
C3 C4 H4C1 113.0 109.5
C3 C4 H4C2 112.9 109.5
H3C1 C3 H3C2 99.7 109.5
C7 C4 H4C1 113.0 109.4
C7 C4 H4C2 113.0 109.5
C4 C7 C10 107.8 109.4
C4 C7 H7C1 112.8 109.4
C4 C7 H7C2 112.8 109.4
H4C1 C4 H4C2 97.5 109.5
C10 C7 H7C1 112.8 109.5
C10 C7 H7C2 112.8 109.5
C7 C10 O15 123.1 120.0
C7 C10 N11 116.9 119.9
H7C1 C7 H7C2 97.7 109.5
O15 C10 N11 120.0 120.0
C10 N11 C12 120.7 120.0
C10 N11 H11 119.7 120.1
C12 N11 H11 119.6 120.0
N11 C12 C16 107.6 109.4
N11 C12 C13 112.1 109.4
N11 C12 H12 108.4 109.5
C16 C12 C13 111.7 109.5
C16 C12 H12 108.4 109.5
C12 C16 S17 112.9 109.5
C12 C16 H161 111.0 109.5
C12 C16 H162 111.0 109.4
C13 C12 H12 108.4 109.5
C12 C13 O18 121.7 120.0
C12 C13 N29 116.3 120.0
S17 C16 H161 110.9 109.5
S17 C16 H162 111.0 109.5
C16 S17 H17 112.9 100.0
H161 C16 H162 99.4 109.5
O18 C13 N29 122.0 120.0
C13 N29 C30 123.5 120.0
C13 N29 H29 118.2 120.0
C30 N29 H29 118.3 120.0
N29 C30 C31 108.5 109.5
N29 C30 C32 117.6 109.5
N29 C30 H30 106.9 109.4
C31 C30 C32 109.6 109.5
C31 C30 H30 106.8 109.5
C30 C31 O42 117.9 120.0
C30 C31 O43 116.4 120.0
C32 C30 H30 106.9 109.5
C30 C32 C37 112.2 109.5
C30 C32 C33 108.6 109.5
C30 C32 H32 109.1 109.5
O42 C31 O43 125.7 120.0
C31 O43 H43 116.4 120.0
C37 C32 C33 108.7 109.5
C37 C32 H32 109.1 109.5
C32 C37 F24 105.9 109.4
C32 C37 F25 108.5 109.5
C32 C37 F26 114.6 109.4
C33 C32 H32 109.1 109.5
C32 C33 F21 109.5 109.5
C32 C33 F23 117.9 109.5
C32 C33 F22 112.0 109.5
F24 C37 F25 109.0 109.5
F24 C37 F26 105.8 109.5
F25 C37 F26 112.7 109.5
F21 C33 F23 103.2 109.5
F21 C33 F22 105.8 109.5
F23 C33 F22 107.4 109.5

Torsion Angles for HFV

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O19 C1 O20 C2 182.4 180.0
O20 C1 O19 H19 180.0 0.1
O20 C1 C2 N14 174.8 340.0
O20 C1 C2 C3 294.5 100.0
O20 C1 C2 H2 54.9 220.0
O20 C1 O19 C2 177.6 180.0
O19 C1 C2 N14 352.6 160.0
O19 C1 C2 C3 112.3 280.0
O19 C1 C2 H2 232.7 40.0
O20 C1 C2 O19 182.2 180.0
C2 C1 O19 H19 2.4 180.0
N14 C2 C1 C3 240.2 240.0
N14 C2 C1 H2 119.9 120.0
C1 C2 N14 H141 128.2 306.3
C1 C2 N14 H142 18.7 59.9
C3 C2 C1 H2 239.6 240.0
C1 C2 C3 C4 180.7 175.0
C1 C2 C3 H3C1 55.4 295.0
C1 C2 C3 H3C2 306.0 55.0
H19 O19 C1 C2 2.4 180.0
C1 C2 N14 C3 119.2 120.0
C1 C2 N14 H2 240.1 240.0
C3 C2 N14 H2 121.0 120.0
N14 C2 C3 C4 299.4 295.0
N14 C2 C3 H3C1 174.1 55.0
N14 C2 C3 H3C2 64.6 175.0
H141 N14 C2 H142 109.5 246.3
C1 C2 C3 N14 241.3 240.0
C1 C2 C3 H2 120.4 120.0
N14 C2 C3 H2 239.0 240.0
C3 C2 N14 H141 9.1 186.3
C3 C2 N14 H142 259.6 299.9
C4 C3 C2 H3C1 125.3 240.0
C4 C3 C2 H3C2 234.7 120.0
C2 C3 C4 C7 174.9 180.0
C2 C3 C4 H4C1 49.6 300.0
C2 C3 C4 H4C2 300.1 60.0
H3C1 C3 C2 H3C2 109.4 240.0
C1 C2 H2 N14 119.0 120.1
C1 C2 H2 C3 240.1 240.0
N14 C2 H2 C3 121.1 120.0
H2 C2 N14 H141 248.1 66.3
H2 C2 N14 H142 138.6 180.0
H2 C2 C3 C4 60.3 55.0
H2 C2 C3 H3C1 295.0 175.0
H2 C2 C3 H3C2 185.6 295.0
H141 N14 C2 C3 9.1 186.3
H141 N14 C2 H2 248.1 66.3
C2 N14 H141 H142 228.9 113.7
H142 N14 C2 C3 259.6 299.9
H142 N14 C2 H2 138.6 180.0
C2 N14 H142 H141 131.1 246.4
C4 C3 C2 H2 60.3 55.0
C2 C3 C4 H3C1 234.7 120.0
C2 C3 C4 H3C2 125.3 240.0
H3C1 C3 C4 H3C2 250.6 120.0
C7 C4 C3 H4C1 125.3 240.0
C7 C4 C3 H4C2 234.7 120.0
C3 C4 C7 C10 181.2 180.0
C3 C4 C7 H7C1 55.9 300.0
C3 C4 C7 H7C2 306.4 60.0
H4C1 C4 C3 H4C2 109.5 240.0
H3C1 C3 C2 H2 295.0 175.0
C2 C3 H3C1 C4 127.2 240.0
C2 C3 H3C1 H3C2 243.6 120.0
C4 C3 H3C1 H3C2 116.4 240.0
H3C1 C3 C4 C7 300.1 60.0
H3C1 C3 C4 H4C1 174.9 180.0
H3C1 C3 C4 H4C2 65.4 300.0
H3C2 C3 C2 H2 185.6 295.0
C2 C3 H3C2 C4 232.8 120.0
C2 C3 H3C2 H3C1 116.4 240.0
C4 C3 H3C2 H3C1 243.6 120.0
H3C2 C3 C4 C7 49.6 300.0
H3C2 C3 C4 H4C1 284.3 60.0
H3C2 C3 C4 H4C2 174.8 180.0
C7 C4 C3 H3C1 300.1 60.0
C7 C4 C3 H3C2 49.6 300.0
C3 C4 C7 H4C1 234.7 120.0
C3 C4 C7 H4C2 125.2 240.0
H4C1 C4 C7 H4C2 250.5 120.0
C10 C7 C4 H7C1 125.2 240.0
C10 C7 C4 H7C2 234.8 120.0
C4 C7 C10 O15 66.6 360.0
C4 C7 C10 N11 245.0 180.0
H7C1 C7 C4 H7C2 109.5 240.1
H4C1 C4 C3 H3C1 174.9 180.0
H4C1 C4 C3 H3C2 284.3 60.0
C3 C4 H4C1 C7 122.2 240.0
C3 C4 H4C1 H4C2 241.1 120.0
C7 C4 H4C1 H4C2 118.9 240.0
H4C1 C4 C7 C10 306.5 60.0
H4C1 C4 C7 H7C1 181.2 180.0
H4C1 C4 C7 H7C2 71.7 299.9
H4C2 C4 C3 H3C1 65.4 300.0
H4C2 C4 C3 H3C2 174.8 180.0
C3 C4 H4C2 C7 237.8 120.0
C3 C4 H4C2 H4C1 118.9 240.0
C7 C4 H4C2 H4C1 241.1 120.0
H4C2 C4 C7 C10 56.0 300.0
H4C2 C4 C7 H7C1 290.7 60.0
H4C2 C4 C7 H7C2 181.2 180.0
C10 C7 C4 H4C1 306.5 60.0
C10 C7 C4 H4C2 56.0 300.0
C4 C7 C10 H7C1 234.8 120.0
C4 C7 C10 H7C2 125.3 240.0
H7C1 C7 C10 H7C2 250.5 120.0
O15 C10 C7 N11 181.6 180.0
C7 C10 N11 C12 177.5 180.0
C7 C10 N11 H11 357.5 360.0
H7C1 C7 C4 H4C1 181.2 180.0
H7C1 C7 C4 H4C2 290.7 60.0
C4 C7 H7C1 C10 122.5 240.0
C4 C7 H7C1 H7C2 241.2 119.9
C10 C7 H7C1 H7C2 118.7 239.9
H7C1 C7 C10 O15 191.8 240.0
H7C1 C7 C10 N11 10.2 60.0
H7C2 C7 C4 H4C1 71.7 299.9
H7C2 C7 C4 H4C2 181.2 180.0
C4 C7 H7C2 C10 237.5 120.0
C4 C7 H7C2 H7C1 118.8 240.1
C10 C7 H7C2 H7C1 241.2 120.1
H7C2 C7 C10 O15 301.3 120.0
H7C2 C7 C10 N11 119.7 300.0
O15 C10 C7 H7C1 191.8 240.0
O15 C10 C7 H7C2 301.3 120.0
C7 C10 O15 N11 178.3 180.0
O15 C10 N11 C12 355.9 0.0
O15 C10 N11 H11 175.9 180.0
N11 C10 C7 H7C1 10.2 60.0
N11 C10 C7 H7C2 119.7 300.0
C7 C10 N11 O15 181.6 180.0
C12 N11 C10 H11 180.0 180.0
C10 N11 C12 C16 155.9 85.0
C10 N11 C12 C13 279.2 205.0
C10 N11 C12 H12 38.8 325.0
C10 N11 C12 H11 180.0 180.0
C16 C12 N11 C13 236.8 240.0
C16 C12 N11 H12 117.1 120.0
N11 C12 C16 S17 56.1 300.0
N11 C12 C16 H161 290.8 60.0
N11 C12 C16 H162 181.4 180.0
C13 C12 N11 H12 240.3 240.0
N11 C12 C13 O18 0.6 0.0
N11 C12 C13 N29 178.8 180.0
C10 N11 H11 C12 180.0 180.0
H11 N11 C12 C16 335.9 265.0
H11 N11 C12 C13 99.2 25.0
H11 N11 C12 H12 218.8 145.0
C16 C12 N11 H11 335.9 265.0
N11 C12 C16 C13 123.5 119.9
N11 C12 C16 H12 242.9 240.0
C13 C12 C16 H12 119.4 120.1
C16 C12 C13 O18 121.5 120.0
C16 C12 C13 N29 299.7 299.9
S17 C16 C12 H161 125.3 240.0
S17 C16 C12 H162 234.7 120.0
C12 C16 S17 H17 180.0 180.0
H161 C16 C12 H162 109.5 240.0
C13 C12 N11 H11 99.2 25.0
N11 C12 C13 C16 239.1 240.1
N11 C12 C13 H12 119.7 120.0
C16 C12 C13 H12 240.6 239.9
C13 C12 C16 S17 292.6 180.0
C13 C12 C16 H161 167.4 300.1
C13 C12 C16 H162 57.9 60.0
O18 C13 C12 N29 181.8 180.0
C12 C13 N29 C30 176.6 180.0
C12 C13 N29 H29 356.6 0.0
H12 C12 N11 H11 218.8 145.0
N11 C12 H12 C16 116.6 120.0
N11 C12 H12 C13 238.0 240.0
C16 C12 H12 C13 121.5 120.0
H12 C12 C16 S17 173.2 60.0
H12 C12 C16 H161 48.0 180.0
H12 C12 C16 H162 298.5 300.0
H12 C12 C13 O18 240.9 240.0
H12 C12 C13 N29 59.1 60.0
S17 C16 C12 C13 292.6 180.0
S17 C16 C12 H12 173.2 60.0
C12 C16 S17 H161 234.7 120.0
C12 C16 S17 H162 125.3 240.0
H161 C16 S17 H162 250.5 120.0
H161 C16 C12 C13 167.4 300.1
H161 C16 C12 H12 48.0 180.0
C12 C16 H161 S17 126.4 240.0
C12 C16 H161 H162 243.2 119.9
S17 C16 H161 H162 116.8 240.0
H161 C16 S17 H17 305.3 60.0
H162 C16 C12 C13 57.9 60.0
H162 C16 C12 H12 298.5 300.0
C12 C16 H162 S17 233.7 120.0
C12 C16 H162 H161 116.8 240.0
S17 C16 H162 H161 243.2 120.0
H162 C16 S17 H17 54.7 300.0
H17 S17 C16 H161 305.3 60.0
H17 S17 C16 H162 54.7 300.0
O18 C13 C12 H12 240.9 240.0
C12 C13 O18 N29 178.1 180.0
O18 C13 N29 C30 354.8 360.0
O18 C13 N29 H29 174.8 180.0
N29 C13 C12 H12 59.1 60.0
C12 C13 N29 O18 181.8 180.0
C30 N29 C13 H29 180.0 180.0
C13 N29 C30 C31 240.4 240.6
C13 N29 C30 C32 115.4 120.6
C13 N29 C30 H30 355.3 0.6
C13 N29 C30 H29 180.0 180.0
C31 C30 N29 C32 125.1 120.0
C31 C30 N29 H30 245.1 240.0
N29 C30 C31 O42 186.7 348.3
N29 C30 C31 O43 8.0 168.4
C32 C30 N29 H30 120.0 120.0
N29 C30 C32 C37 46.0 301.4
N29 C30 C32 C33 285.8 61.4
N29 C30 C32 H32 166.9 181.5
C13 N29 H29 C30 180.0 180.0
H29 N29 C30 C31 60.5 60.5
H29 N29 C30 C32 295.4 300.5
H29 N29 C30 H30 175.4 180.5
C31 C30 N29 H29 60.5 60.5
N29 C30 C31 C32 230.4 240.0
N29 C30 C31 H30 114.9 120.0
C32 C30 C31 H30 244.5 240.0
C31 C30 C32 C37 281.4 181.4
C31 C30 C32 C33 161.3 301.4
C31 C30 C32 H32 42.4 61.4
O42 C31 C30 O43 178.7 179.9
C30 C31 O43 H43 180.0 180.0
C32 C30 N29 H29 295.4 300.5
N29 C30 C32 C31 124.5 120.0
N29 C30 C32 H30 240.0 240.0
C31 C30 C32 H30 115.5 120.0
C32 C30 C31 O42 316.3 108.3
C32 C30 C31 O43 137.6 288.4
C37 C32 C30 C33 120.2 240.0
C37 C32 C30 H32 239.0 120.0
C30 C32 C37 F24 163.3 60.0
C30 C32 C37 F25 46.5 180.0
C30 C32 C37 F26 279.6 300.0
C33 C32 C30 H32 118.9 240.0
C30 C32 C33 F21 294.8 54.9
C30 C32 C33 F23 52.3 174.9
C30 C32 C33 F22 177.7 294.8
H30 C30 N29 H29 175.4 180.5
N29 C30 H30 C31 244.0 240.0
N29 C30 H30 C32 126.7 120.0
C31 C30 H30 C32 242.7 240.0
H30 C30 C31 O42 71.8 228.4
H30 C30 C31 O43 253.1 48.4
H30 C30 C32 C37 166.0 61.4
H30 C30 C32 C33 45.8 181.4
H30 C30 C32 H32 287.0 301.4
O42 C31 C30 C32 316.3 108.3
O42 C31 C30 H30 71.8 228.4
C30 C31 O42 O43 181.4 180.1
O42 C31 O43 H43 1.4 0.1
O43 C31 C30 C32 137.6 288.4
O43 C31 C30 H30 253.1 48.4
C30 C31 O43 O42 178.6 179.9
C37 C32 C30 H30 166.0 61.4
C30 C32 C37 C33 239.9 120.0
C30 C32 C37 H32 121.0 240.0
C33 C32 C37 H32 241.2 120.0
C37 C32 C33 F21 172.4 174.9
C37 C32 C33 F23 289.9 294.9
C37 C32 C33 F22 55.4 54.8
F24 C37 C32 F25 116.8 240.0
F24 C37 C32 F26 243.7 120.0
F25 C37 C32 F26 126.9 240.0
C33 C32 C30 H30 45.8 181.4
C30 C32 C33 C37 122.3 240.0
C30 C32 C33 H32 241.2 120.0
C37 C32 C33 H32 118.8 240.0
C33 C32 C37 F24 283.5 300.0
C33 C32 C37 F25 166.6 60.0
C33 C32 C37 F26 39.7 180.0
F21 C33 C32 F23 242.5 240.0
F21 C33 C32 F22 117.1 120.0
F23 C33 C32 F22 234.6 240.0
H32 C32 C30 H30 287.0 301.4
C30 C32 H32 C37 237.1 120.0
C30 C32 H32 C33 118.6 240.0
C37 C32 H32 C33 241.4 120.0
H32 C32 C37 F24 42.3 180.0
H32 C32 C37 F25 285.5 300.0
H32 C32 C37 F26 158.6 60.0
H32 C32 C33 F21 53.6 294.8
H32 C32 C33 F23 171.1 54.8
H32 C32 C33 F22 296.5 174.8
F24 C37 C32 C33 283.5 300.0
F24 C37 C32 H32 42.3 180.0
C32 C37 F24 F25 243.5 120.0
C32 C37 F24 F26 122.1 240.1
F25 C37 F24 F26 238.6 120.1
F25 C37 C32 C33 166.6 60.0
F25 C37 C32 H32 285.5 300.0
C32 C37 F25 F24 114.9 240.0
C32 C37 F25 F26 232.0 120.0
F24 C37 F25 F26 117.1 239.9
F26 C37 C32 C33 39.7 180.0
F26 C37 C32 H32 158.6 60.0
C32 C37 F26 F24 243.7 119.9
C32 C37 F26 F25 124.7 240.0
F24 C37 F26 F25 241.0 120.1
F21 C33 C32 H32 53.6 294.8
C32 C33 F21 F23 126.3 120.0
C32 C33 F21 F22 239.1 240.0
F23 C33 F21 F22 112.7 120.0
F23 C33 C32 H32 171.1 54.8
C32 C33 F23 F21 239.2 240.0
C32 C33 F23 F22 127.7 120.0
F21 C33 F23 F22 248.4 240.0
F22 C33 C32 H32 296.5 174.8
C32 C33 F22 F21 119.2 120.0
C32 C33 F22 F23 229.0 240.0
F21 C33 F22 F23 109.8 120.0