PDB Chemical Component HFT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HFT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
F1 |
C7 |
1.329 |
1.399 |
C7 |
F2 |
1.330 |
1.399 |
C7 |
F3 |
1.330 |
1.399 |
C7 |
C3 |
1.541 |
1.507 |
C3 |
C2 |
1.397 |
1.381 |
C3 |
C4 |
1.398 |
1.383 |
C2 |
C1 |
1.392 |
1.388 |
C2 |
H2 |
1.103 |
1.081 |
C4 |
N1 |
1.333 |
1.480 |
C4 |
C5 |
1.392 |
1.383 |
N1 |
O2 |
1.420 |
1.218 |
N1 |
O1 |
1.420 |
1.217 |
C5 |
C6 |
1.390 |
1.381 |
C5 |
H5 |
1.103 |
1.079 |
C6 |
C1 |
1.390 |
1.388 |
C6 |
H6 |
1.102 |
1.081 |
C1 |
N9 |
1.334 |
1.400 |
N9 |
C10 |
1.331 |
1.348 |
N9 |
HN9 |
1.019 |
0.970 |
C10 |
O10 |
1.231 |
1.212 |
C10 |
C11 |
1.531 |
1.507 |
C11 |
C12 |
1.530 |
1.530 |
C11 |
C13 |
1.530 |
1.530 |
C11 |
O11 |
1.430 |
1.430 |
C12 |
H121 |
1.114 |
1.089 |
C12 |
H122 |
1.114 |
1.089 |
C12 |
H123 |
1.115 |
1.090 |
C13 |
H131 |
1.114 |
1.090 |
C13 |
H132 |
1.115 |
1.090 |
C13 |
H133 |
1.116 |
1.091 |
O11 |
H11 |
0.950 |
0.967 |
Bond Angles for HFT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
F1 |
C7 |
F2 |
106.6 |
109.5 |
F1 |
C7 |
F3 |
105.6 |
109.5 |
F1 |
C7 |
C3 |
111.8 |
109.5 |
F2 |
C7 |
F3 |
109.6 |
109.4 |
F2 |
C7 |
C3 |
110.6 |
109.5 |
F3 |
C7 |
C3 |
112.3 |
109.4 |
C7 |
C3 |
C2 |
118.9 |
119.9 |
C7 |
C3 |
C4 |
123.1 |
120.0 |
C2 |
C3 |
C4 |
117.9 |
120.1 |
C3 |
C2 |
C1 |
122.6 |
119.9 |
C3 |
C2 |
H2 |
118.9 |
120.0 |
C3 |
C4 |
N1 |
123.9 |
119.9 |
C3 |
C4 |
C5 |
119.9 |
120.1 |
C1 |
C2 |
H2 |
118.5 |
120.0 |
C2 |
C1 |
C6 |
118.6 |
119.9 |
C2 |
C1 |
N9 |
123.7 |
120.1 |
N1 |
C4 |
C5 |
115.9 |
119.9 |
C4 |
N1 |
O2 |
119.4 |
120.0 |
C4 |
N1 |
O1 |
123.2 |
120.0 |
C4 |
C5 |
C6 |
121.3 |
120.1 |
C4 |
C5 |
H5 |
119.4 |
119.9 |
O2 |
N1 |
O1 |
117.4 |
120.0 |
C6 |
C5 |
H5 |
119.3 |
120.0 |
C5 |
C6 |
C1 |
119.7 |
120.0 |
C5 |
C6 |
H6 |
120.2 |
120.0 |
C1 |
C6 |
H6 |
120.1 |
120.0 |
C6 |
C1 |
N9 |
117.6 |
120.1 |
C1 |
N9 |
C10 |
126.7 |
120.0 |
C1 |
N9 |
HN9 |
116.7 |
120.0 |
C10 |
N9 |
HN9 |
116.5 |
120.0 |
N9 |
C10 |
O10 |
124.9 |
120.0 |
N9 |
C10 |
C11 |
114.3 |
120.0 |
O10 |
C10 |
C11 |
120.8 |
120.0 |
C10 |
C11 |
C12 |
109.0 |
109.5 |
C10 |
C11 |
C13 |
109.0 |
109.5 |
C10 |
C11 |
O11 |
108.8 |
109.4 |
C12 |
C11 |
C13 |
110.1 |
109.5 |
C12 |
C11 |
O11 |
109.8 |
109.5 |
C11 |
C12 |
H121 |
109.0 |
109.5 |
C11 |
C12 |
H122 |
112.4 |
109.5 |
C11 |
C12 |
H123 |
112.3 |
109.4 |
C13 |
C11 |
O11 |
110.0 |
109.5 |
C11 |
C13 |
H131 |
109.0 |
109.5 |
C11 |
C13 |
H132 |
112.4 |
109.5 |
C11 |
C13 |
H133 |
112.4 |
109.5 |
C11 |
O11 |
H11 |
108.8 |
106.8 |
H121 |
C12 |
H122 |
112.4 |
109.5 |
H121 |
C12 |
H123 |
112.4 |
109.5 |
H122 |
C12 |
H123 |
98.0 |
109.5 |
H131 |
C13 |
H132 |
112.4 |
109.5 |
H131 |
C13 |
H133 |
112.4 |
109.5 |
H132 |
C13 |
H133 |
98.0 |
109.4 |
Torsion Angles for HFT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
F2 |
C7 |
F1 |
F3 |
116.5 |
120.0 |
F2 |
C7 |
F1 |
C3 |
239.0 |
240.0 |
F3 |
C7 |
F1 |
C3 |
122.5 |
120.0 |
F1 |
C7 |
C3 |
C2 |
345.4 |
0.2 |
F1 |
C7 |
C3 |
C4 |
162.8 |
180.0 |
F1 |
C7 |
F2 |
F3 |
246.2 |
240.0 |
F1 |
C7 |
F2 |
C3 |
121.8 |
120.1 |
F3 |
C7 |
F2 |
C3 |
235.6 |
240.1 |
F2 |
C7 |
C3 |
C2 |
104.0 |
120.3 |
F2 |
C7 |
C3 |
C4 |
281.5 |
300.0 |
F1 |
C7 |
F3 |
F2 |
114.5 |
120.0 |
F1 |
C7 |
F3 |
C3 |
237.9 |
240.0 |
F2 |
C7 |
F3 |
C3 |
123.4 |
120.0 |
F3 |
C7 |
C3 |
C2 |
226.8 |
240.2 |
F3 |
C7 |
C3 |
C4 |
44.3 |
60.0 |
F1 |
C7 |
C3 |
F2 |
241.3 |
239.9 |
F1 |
C7 |
C3 |
F3 |
118.5 |
120.0 |
F2 |
C7 |
C3 |
F3 |
237.2 |
240.1 |
C2 |
C3 |
C7 |
C4 |
182.5 |
180.3 |
C7 |
C3 |
C2 |
C1 |
177.0 |
180.3 |
C7 |
C3 |
C2 |
H2 |
357.1 |
359.7 |
C7 |
C3 |
C4 |
N1 |
10.6 |
0.0 |
C7 |
C3 |
C4 |
C5 |
183.6 |
180.0 |
C7 |
C3 |
C2 |
C4 |
177.6 |
179.7 |
C2 |
C3 |
C4 |
N1 |
188.1 |
179.8 |
C2 |
C3 |
C4 |
C5 |
1.1 |
359.7 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.6 |
C3 |
C2 |
C1 |
C6 |
359.8 |
359.4 |
C3 |
C2 |
C1 |
N9 |
178.3 |
179.7 |
C7 |
C3 |
C4 |
C2 |
182.5 |
180.3 |
C4 |
C3 |
C2 |
C1 |
359.5 |
0.6 |
C4 |
C3 |
C2 |
H2 |
179.5 |
180.0 |
N1 |
C4 |
C3 |
C5 |
187.0 |
180.1 |
C3 |
C4 |
N1 |
O2 |
184.3 |
180.0 |
C3 |
C4 |
N1 |
O1 |
1.8 |
359.9 |
C3 |
C4 |
C5 |
C6 |
359.2 |
360.0 |
C3 |
C4 |
C5 |
H5 |
179.1 |
180.1 |
C1 |
C2 |
C3 |
C4 |
359.5 |
0.6 |
C3 |
C2 |
C1 |
H2 |
180.0 |
179.4 |
C5 |
C6 |
C1 |
C2 |
0.5 |
0.3 |
C2 |
C1 |
C6 |
H6 |
180.5 |
180.3 |
C6 |
C1 |
C2 |
N9 |
181.5 |
179.6 |
C2 |
C1 |
N9 |
C10 |
359.7 |
217.0 |
C2 |
C1 |
N9 |
HN9 |
179.7 |
36.9 |
H2 |
C2 |
C3 |
C4 |
179.5 |
180.0 |
C3 |
C2 |
H2 |
C1 |
180.0 |
180.6 |
H2 |
C2 |
C1 |
C6 |
179.8 |
180.0 |
H2 |
C2 |
C1 |
N9 |
358.2 |
0.3 |
C3 |
C4 |
N1 |
C5 |
173.3 |
179.9 |
N1 |
C4 |
C5 |
C6 |
172.7 |
179.9 |
N1 |
C4 |
C5 |
H5 |
352.7 |
0.0 |
O2 |
N1 |
C4 |
O1 |
182.5 |
180.1 |
C3 |
C4 |
C5 |
N1 |
186.4 |
180.1 |
C5 |
C4 |
N1 |
O2 |
11.0 |
0.0 |
C5 |
C4 |
N1 |
O1 |
188.5 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
C1 |
0.1 |
0.0 |
C4 |
C5 |
C6 |
H6 |
180.0 |
180.0 |
O2 |
N1 |
C4 |
C5 |
11.0 |
0.0 |
C4 |
N1 |
O2 |
O1 |
177.7 |
179.9 |
O1 |
N1 |
C4 |
C5 |
188.5 |
180.0 |
C4 |
N1 |
O1 |
O2 |
182.4 |
180.1 |
C2 |
C1 |
C6 |
C5 |
0.5 |
0.3 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.1 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
N9 |
181.9 |
180.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.9 |
H5 |
C5 |
C6 |
C1 |
180.1 |
179.9 |
H5 |
C5 |
C6 |
H6 |
0.0 |
359.9 |
C6 |
C1 |
C2 |
H2 |
179.8 |
180.0 |
C2 |
C1 |
C6 |
N9 |
178.6 |
180.4 |
C1 |
C6 |
C5 |
H5 |
180.1 |
179.9 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C6 |
C1 |
N9 |
C10 |
178.2 |
37.3 |
C6 |
C1 |
N9 |
HN9 |
358.2 |
217.3 |
H6 |
C6 |
C5 |
H5 |
0.0 |
359.9 |
C5 |
C6 |
H6 |
C1 |
180.0 |
180.0 |
H6 |
C6 |
C1 |
N9 |
1.9 |
359.9 |
N9 |
C1 |
C2 |
H2 |
358.2 |
0.3 |
C2 |
C1 |
N9 |
C6 |
181.5 |
179.6 |
N9 |
C1 |
C6 |
H6 |
1.9 |
359.9 |
C10 |
N9 |
C1 |
HN9 |
180.0 |
180.1 |
C1 |
N9 |
C10 |
O10 |
359.6 |
5.5 |
C1 |
N9 |
C10 |
C11 |
180.1 |
185.6 |
C1 |
N9 |
C10 |
HN9 |
180.0 |
179.9 |
O10 |
C10 |
N9 |
C11 |
179.5 |
179.9 |
N9 |
C10 |
C11 |
C12 |
113.5 |
60.0 |
N9 |
C10 |
C11 |
C13 |
233.7 |
299.9 |
N9 |
C10 |
C11 |
O11 |
353.8 |
180.0 |
C1 |
N9 |
HN9 |
C10 |
180.0 |
180.1 |
HN9 |
N9 |
C10 |
O10 |
179.6 |
185.6 |
HN9 |
N9 |
C10 |
C11 |
0.1 |
5.6 |
O10 |
C10 |
N9 |
HN9 |
179.6 |
185.6 |
N9 |
C10 |
O10 |
C11 |
180.6 |
180.1 |
O10 |
C10 |
C11 |
C12 |
294.0 |
240.0 |
O10 |
C10 |
C11 |
C13 |
54.2 |
120.0 |
O10 |
C10 |
C11 |
O11 |
174.3 |
0.0 |
C11 |
C10 |
N9 |
HN9 |
0.1 |
5.6 |
N9 |
C10 |
C11 |
O10 |
179.5 |
179.9 |
C12 |
C11 |
C10 |
C13 |
239.8 |
120.0 |
C12 |
C11 |
C10 |
O11 |
119.7 |
240.0 |
C10 |
C11 |
C12 |
H121 |
180.0 |
300.0 |
C10 |
C11 |
C12 |
H122 |
305.3 |
60.0 |
C10 |
C11 |
C12 |
H123 |
54.7 |
180.0 |
C13 |
C11 |
C10 |
O11 |
240.0 |
120.0 |
C10 |
C11 |
C13 |
H131 |
180.0 |
180.0 |
C10 |
C11 |
C13 |
H132 |
305.3 |
300.1 |
C10 |
C11 |
C13 |
H133 |
54.7 |
60.0 |
C10 |
C11 |
O11 |
H11 |
180.1 |
180.0 |
C10 |
C11 |
C12 |
C13 |
119.6 |
240.0 |
C10 |
C11 |
C12 |
O11 |
240.9 |
120.0 |
C13 |
C11 |
C12 |
O11 |
121.3 |
240.0 |
C12 |
C11 |
C13 |
H131 |
299.5 |
60.0 |
C12 |
C11 |
C13 |
H132 |
64.9 |
180.0 |
C12 |
C11 |
C13 |
H133 |
174.3 |
300.0 |
C12 |
C11 |
O11 |
H11 |
60.8 |
300.0 |
H121 |
C12 |
C11 |
H122 |
234.7 |
240.0 |
H121 |
C12 |
C11 |
H123 |
125.3 |
120.0 |
H122 |
C12 |
C11 |
H123 |
250.6 |
240.0 |
C10 |
C11 |
C13 |
C12 |
240.4 |
120.1 |
C10 |
C11 |
C13 |
O11 |
119.3 |
240.0 |
C12 |
C11 |
C13 |
O11 |
238.8 |
120.0 |
C13 |
C11 |
C12 |
H121 |
60.5 |
60.0 |
C13 |
C11 |
C12 |
H122 |
185.7 |
180.0 |
C13 |
C11 |
C12 |
H123 |
295.2 |
300.0 |
C13 |
C11 |
O11 |
H11 |
299.5 |
60.0 |
H131 |
C13 |
C11 |
H132 |
234.7 |
239.9 |
H131 |
C13 |
C11 |
H133 |
125.3 |
120.0 |
H132 |
C13 |
C11 |
H133 |
250.6 |
240.1 |
C10 |
C11 |
O11 |
C12 |
119.3 |
240.0 |
C10 |
C11 |
O11 |
C13 |
240.6 |
120.0 |
C12 |
C11 |
O11 |
C13 |
121.4 |
240.0 |
O11 |
C11 |
C12 |
H121 |
299.2 |
180.0 |
O11 |
C11 |
C12 |
H122 |
64.4 |
300.0 |
O11 |
C11 |
C12 |
H123 |
173.8 |
60.0 |
O11 |
C11 |
C13 |
H131 |
60.7 |
300.0 |
O11 |
C11 |
C13 |
H132 |
186.0 |
60.0 |
O11 |
C11 |
C13 |
H133 |
295.4 |
180.0 |
H121 |
C12 |
C11 |
C13 |
60.5 |
60.0 |
H121 |
C12 |
C11 |
O11 |
299.2 |
180.0 |
C11 |
C12 |
H121 |
H122 |
125.2 |
120.0 |
C11 |
C12 |
H121 |
H123 |
234.7 |
240.0 |
H122 |
C12 |
H121 |
H123 |
109.5 |
120.0 |
H122 |
C12 |
C11 |
C13 |
185.7 |
180.0 |
H122 |
C12 |
C11 |
O11 |
64.4 |
300.0 |
C11 |
C12 |
H122 |
H121 |
236.6 |
240.0 |
C11 |
C12 |
H122 |
H123 |
118.2 |
120.0 |
H121 |
C12 |
H122 |
H123 |
241.6 |
240.0 |
H123 |
C12 |
C11 |
C13 |
295.2 |
300.0 |
H123 |
C12 |
C11 |
O11 |
173.8 |
60.0 |
C11 |
C12 |
H123 |
H121 |
123.4 |
120.0 |
C11 |
C12 |
H123 |
H122 |
241.7 |
240.0 |
H121 |
C12 |
H123 |
H122 |
118.3 |
120.0 |
H131 |
C13 |
C11 |
O11 |
60.7 |
300.0 |
C11 |
C13 |
H131 |
H132 |
125.3 |
120.1 |
C11 |
C13 |
H131 |
H133 |
234.7 |
240.0 |
H132 |
C13 |
H131 |
H133 |
109.5 |
119.9 |
H132 |
C13 |
C11 |
O11 |
186.0 |
60.0 |
C11 |
C13 |
H132 |
H131 |
236.6 |
239.9 |
C11 |
C13 |
H132 |
H133 |
118.3 |
120.0 |
H131 |
C13 |
H132 |
H133 |
241.7 |
240.0 |
H133 |
C13 |
C11 |
O11 |
295.4 |
180.0 |
C11 |
C13 |
H133 |
H131 |
123.4 |
120.0 |
C11 |
C13 |
H133 |
H132 |
241.7 |
240.0 |
H131 |
C13 |
H133 |
H132 |
118.3 |
120.0 |