PDB Chemical Component HED

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HED

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.414	1.429
C1	C2	1.549	1.529
C1	H11	1.115	1.089
C1	H12	1.114	1.090
O1	HO1	0.950	0.967
C2	S3	1.818	1.814
C2	H21	1.114	1.090
C2	H22	1.115	1.089
S3	S4	2.091	2.050
S4	C5	1.839	1.813
C5	C6	1.561	1.529
C5	H51	1.115	1.090
C5	H52	1.116	1.090
C6	O6	1.440	1.430
C6	H61	1.115	1.090
C6	H62	1.116	1.088
O6	HO6	0.949	0.967

Bond Angles for HED

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	103.7	109.5
O1	C1	H11	114.4	109.5
O1	C1	H12	114.4	109.5
C1	O1	HO1	103.7	106.8
C2	C1	H11	114.4	109.5
C2	C1	H12	114.4	109.4
C1	C2	S3	119.4	109.5
C1	C2	H21	108.6	109.5
C1	C2	H22	108.6	109.4
H11	C1	H12	96.1	109.4
S3	C2	H21	108.6	109.4
S3	C2	H22	108.6	109.5
C2	S3	S4	102.6	100.0
H21	C2	H22	101.4	109.5
S3	S4	C5	112.8	100.0
S4	C5	C6	115.7	109.5
S4	C5	H51	109.9	109.4
S4	C5	H52	109.9	109.4
C6	C5	H51	110.0	109.5
C6	C5	H52	109.9	109.6
C5	C6	O6	116.0	109.4
C5	C6	H61	109.8	109.4
C5	C6	H62	109.8	109.6
H51	C5	H52	100.3	109.5
O6	C6	H61	109.9	109.4
O6	C6	H62	109.9	109.5
C6	O6	HO6	116.0	106.7
H61	C6	H62	100.3	109.5

Torsion Angles for HED

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	H11	234.8	239.9
C2	C1	O1	H12	125.3	119.9
O1	C1	C2	S3	150.2	180.0
O1	C1	C2	H21	275.5	299.9
O1	C1	C2	H22	25.0	60.0
H11	C1	O1	H12	250.5	240.0
O1	C1	C2	H11	125.2	120.0
O1	C1	C2	H12	234.7	240.0
C2	C1	O1	HO1	180.0	179.9
H11	C1	C2	H12	109.5	120.0
S3	C2	C1	H21	234.7	240.1
S3	C2	C1	H22	125.3	120.0
C1	C2	S3	S4	106.4	60.0
H21	C2	C1	H22	250.5	239.9
O1	C1	H11	C2	240.6	240.0
O1	C1	H11	H12	120.3	120.0
H11	C1	O1	HO1	305.2	300.0
C2	C1	H11	H12	239.7	240.0
H11	C1	C2	S3	25.0	60.0
H11	C1	C2	H21	150.3	179.9
H11	C1	C2	H22	259.7	300.0
O1	C1	H12	C2	119.4	120.0
O1	C1	H12	H11	239.7	240.0
H12	C1	O1	HO1	54.7	60.0
C2	C1	H12	H11	120.3	120.0
H12	C1	C2	S3	275.5	300.0
H12	C1	C2	H21	40.7	59.9
H12	C1	C2	H22	150.2	180.0
HO1	O1	C1	C2	180.0	179.9
HO1	O1	C1	H11	305.2	300.0
HO1	O1	C1	H12	54.7	60.0
S3	C2	C1	H11	25.0	60.0
S3	C2	C1	H12	275.5	300.0
C1	C2	S3	H21	125.3	120.0
C1	C2	S3	H22	234.8	240.0
H21	C2	S3	H22	109.5	120.1
C2	S3	S4	C5	73.5	90.0
H21	C2	C1	H11	150.3	179.9
H21	C2	C1	H12	40.7	59.9
C1	C2	H21	S3	228.7	240.0
C1	C2	H21	H22	114.3	120.0
S3	C2	H21	H22	245.7	240.0
H21	C2	S3	S4	341.2	300.1
H22	C2	C1	H11	259.7	300.0
H22	C2	C1	H12	150.2	180.0
C1	C2	H22	S3	131.3	120.0
C1	C2	H22	H21	245.7	240.0
S3	C2	H22	H21	114.3	120.0
H22	C2	S3	S4	231.7	180.0
S4	S3	C2	H21	341.2	300.1
S4	S3	C2	H22	231.7	180.0
S3	S4	C5	C6	154.6	60.0
S3	S4	C5	H51	279.9	180.0
S3	S4	C5	H52	29.3	300.0
C6	C5	S4	H51	234.7	240.0
C6	C5	S4	H52	125.2	120.1
S4	C5	C6	O6	106.2	180.0
S4	C5	C6	H61	231.6	299.9
S4	C5	C6	H62	340.9	60.0
H51	C5	S4	H52	250.5	240.0
S4	C5	C6	H51	125.3	120.0
S4	C5	C6	H52	234.8	240.0
H51	C5	C6	H52	109.5	120.1
O6	C6	C5	H61	234.7	240.1
O6	C6	C5	H62	125.3	120.1
C5	C6	O6	HO6	180.0	179.9
H61	C6	C5	H62	250.6	239.9
S4	C5	H51	C6	231.5	240.0
S4	C5	H51	H52	115.7	119.9
C6	C5	H51	H52	244.2	239.9
H51	C5	C6	O6	341.0	60.1
H51	C5	C6	H61	106.3	180.0
H51	C5	C6	H62	215.7	300.0
S4	C5	H52	C6	128.5	120.0
S4	C5	H52	H51	244.3	240.1
C6	C5	H52	H51	115.8	120.0
H52	C5	C6	O6	231.5	300.0
H52	C5	C6	H61	356.8	59.9
H52	C5	C6	H62	106.2	180.0
O6	C6	C5	H51	341.0	60.1
O6	C6	C5	H52	231.5	300.0
C5	C6	O6	H61	125.3	119.9
C5	C6	O6	H62	234.8	239.9
H61	C6	O6	H62	109.5	120.0
H61	C6	C5	H51	106.3	180.0
H61	C6	C5	H52	356.8	59.9
C5	C6	H61	O6	231.3	240.1
C5	C6	H61	H62	115.5	120.1
O6	C6	H61	H62	244.3	240.0
H61	C6	O6	HO6	54.7	60.0
H62	C6	C5	H51	215.7	300.0
H62	C6	C5	H52	106.2	180.0
C5	C6	H62	O6	128.7	120.0
C5	C6	H62	H61	244.4	240.0
O6	C6	H62	H61	115.7	120.0
H62	C6	O6	HO6	305.2	300.0
HO6	O6	C6	H61	54.7	60.0
HO6	O6	C6	H62	305.2	300.0