PDB Chemical Component HE6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for HE6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
FE NA 1.947  
FE NB 1.934  
FE NC 1.982  
FE ND 1.983  
NA C1A 1.381  
NA C4A 1.391  
NB C1B 1.387  
NB C4B 1.373  
NC C1C 1.377  
NC C4C 1.383  
ND C4D 1.381  
ND C1D 1.385  
C1A CHA 1.363  
C1A C2A 1.357  
CHA C4B 1.360  
CHA HHA 1.080  
C4D CHC 1.379  
C4D C3D 1.344  
C1B CHB 1.384  
C1B C2B 1.349  
CHB C4C 1.392  
CHB HHB 1.080  
C4A CHD 1.372  
C4A C3A 1.360  
C1C CHC 1.368  
C1C C2C 1.353  
CHC HHC 1.080  
C4B C3B 1.337  
C1D CHD 1.374  
C1D C2D 1.343  
CHD HHD 1.079  
C4C C3C 1.343  
C2A CMA 1.513  
C2A C3A 1.364  
CMA HMA1 1.100  
CMA HMA2 1.100  
CMA HMA3 1.100  
C3A CAA 1.537  
CAA O1A 1.247  
CAA O2A 1.249  
O2A H2A 0.950  
C2B CMB 1.517  
C2B C3B 1.348  
CMB HMB1 1.100  
CMB HMB2 1.100  
CMB HMB3 1.100  
C3B CNB 1.523  
CNB HNB1 1.100  
CNB HNB2 1.100  
CNB HNB3 1.100  
C2C CMC 1.539  
C2C C3C 1.341  
CMC HMC1 1.100  
CMC HMC2 1.100  
CMC HMC3 1.100  
C3C CNC 1.509  
CNC HNC1 1.100  
CNC HNC2 1.100  
CNC HNC3 1.100  
C2D C3D 1.348  
C2D CAD 1.533  
CMD C3D 1.527  
CMD HMD1 1.100  
CMD HMD2 1.100  
CMD HMD3 1.100  
CAD O1D 1.239  
CAD O2D 1.242  
O2D H2D 0.950  

Bond Angles for HE6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
NA FE NB 88.4  
NA FE NC 176.6  
NA FE ND 91.3  
FE NA C1A 129.4  
FE NA C4A 126.0  
NB FE NC 92.1  
NB FE ND 176.4  
FE NB C1B 126.7  
FE NB C4B 128.3  
NC FE ND 88.0  
FE NC C1C 128.8  
FE NC C4C 125.8  
FE ND C4D 128.8  
FE ND C1D 127.7  
C1A NA C4A 104.7  
NA C1A CHA 124.4  
NA C1A C2A 109.8  
NA C4A CHD 125.9  
NA C4A C3A 109.9  
C1B NB C4B 104.8  
NB C1B CHB 125.4  
NB C1B C2B 108.6  
NB C4B CHA 126.2  
NB C4B C3B 110.1  
C1C NC C4C 104.2  
NC C1C CHC 125.2  
NC C1C C2C 110.3  
NC C4C CHB 124.9  
NC C4C C3C 109.1  
C4D ND C1D 103.5  
ND C4D CHC 125.0  
ND C4D C3D 110.1  
ND C1D CHD 122.9  
ND C1D C2D 110.7  
CHA C1A C2A 125.7  
C1A CHA C4B 122.6  
C1A CHA HHA 118.7  
C1A C2A CMA 125.5  
C1A C2A C3A 108.2  
C4B CHA HHA 118.7  
CHA C4B C3B 123.5  
CHC C4D C3D 124.6  
C4D CHC C1C 123.3  
C4D CHC HHC 118.3  
C4D C3D C2D 108.4  
C4D C3D CMD 123.4  
CHB C1B C2B 125.9  
C1B CHB C4C 124.5  
C1B CHB HHB 117.8  
C1B C2B CMB 127.0  
C1B C2B C3B 108.6  
C4C CHB HHB 117.8  
CHB C4C C3C 125.8  
CHD C4A C3A 124.2  
C4A CHD C1D 126.1  
C4A CHD HHD 117.0  
C4A C3A C2A 107.3  
C4A C3A CAA 126.3  
CHC C1C C2C 124.4  
C1C CHC HHC 118.4  
C1C C2C CMC 126.7  
C1C C2C C3C 106.8  
C4B C3B C2B 107.8  
C4B C3B CNB 126.6  
CHD C1D C2D 126.3  
C1D CHD HHD 116.9  
C1D C2D C3D 107.2  
C1D C2D CAD 127.3  
C4C C3C C2C 109.3  
C4C C3C CNC 125.5  
CMA C2A C3A 125.7  
C2A CMA HMA1 109.5  
C2A CMA HMA2 109.5  
C2A CMA HMA3 109.5  
C2A C3A CAA 126.2  
HMA1 CMA HMA2 109.5  
HMA1 CMA HMA3 109.5  
HMA2 CMA HMA3 109.5  
C3A CAA O1A 113.6  
C3A CAA O2A 119.4  
O1A CAA O2A 121.7  
CAA O2A H2A 109.5  
CMB C2B C3B 124.1  
C2B CMB HMB1 109.5  
C2B CMB HMB2 109.5  
C2B CMB HMB3 109.4  
C2B C3B CNB 125.3  
HMB1 CMB HMB2 109.5  
HMB1 CMB HMB3 109.5  
HMB2 CMB HMB3 109.5  
C3B CNB HNB1 109.5  
C3B CNB HNB2 109.5  
C3B CNB HNB3 109.5  
HNB1 CNB HNB2 109.5  
HNB1 CNB HNB3 109.5  
HNB2 CNB HNB3 109.4  
CMC C2C C3C 126.5  
C2C CMC HMC1 109.5  
C2C CMC HMC2 109.5  
C2C CMC HMC3 109.5  
C2C C3C CNC 125.1  
HMC1 CMC HMC2 109.4  
HMC1 CMC HMC3 109.5  
HMC2 CMC HMC3 109.5  
C3C CNC HNC1 109.5  
C3C CNC HNC2 109.5  
C3C CNC HNC3 109.4  
HNC1 CNC HNC2 109.4  
HNC1 CNC HNC3 109.5  
HNC2 CNC HNC3 109.5  
C3D C2D CAD 125.3  
C2D C3D CMD 128.0  
C2D CAD O1D 117.1  
C2D CAD O2D 118.5  
C3D CMD HMD1 109.5  
C3D CMD HMD2 109.5  
C3D CMD HMD3 109.5  
HMD1 CMD HMD2 109.5  
HMD1 CMD HMD3 109.5  
HMD2 CMD HMD3 109.4  
O1D CAD O2D 119.9  
CAD O2D H2D 109.5  

Torsion Angles for HE6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
NB FE NA NC 99.4  
NB FE NA ND 176.4  
NA FE NB C1B 182.8  
NA FE NB C4B 9.4  
NC FE NA ND 77.0  
NA FE NC C1C 287.5  
NA FE NC C4C 93.2  
NA FE ND C4D 180.5  
NA FE ND C1D 358.7  
C1A NA FE C4A 179.8  
FE NA C1A CHA 1.0  
FE NA C1A C2A 178.4  
FE NA C4A CHD 3.4  
FE NA C4A C3A 181.7  
NA FE NB NC 183.4  
NA FE NB ND 274.4  
NB FE NA C1A 354.4  
NB FE NA C4A 174.7  
NC FE NB ND 91.0  
NB FE NC C1C 188.3  
NB FE NC C4C 354.0  
NB FE ND C4D 95.0  
NB FE ND C1D 273.1  
C1B NB FE C4B 173.4  
FE NB C1B CHB 7.6  
FE NB C1B C2B 184.1  
FE NB C4B CHA 350.5  
FE NB C4B C3B 174.9  
NA FE NC NB 99.3  
NA FE NC ND 282.9  
NC FE NA C1A 255.1  
NC FE NA C4A 75.3  
NB FE NC ND 183.6  
NC FE NB C1B 359.5  
NC FE NB C4B 186.1  
NC FE ND C4D 3.8  
NC FE ND C1D 182.0  
C1C NC FE C4C 194.3  
FE NC C1C CHC 349.1  
FE NC C1C C2C 165.0  
FE NC C4C CHB 6.5  
FE NC C4C C3C 191.5  
NA FE ND NB 85.5  
NA FE ND NC 176.7  
ND FE NA C1A 178.1  
ND FE NA C4A 358.3  
NB FE ND NC 91.2  
ND FE NB C1B 268.4  
ND FE NB C4B 95.0  
ND FE NC C1C 4.6  
ND FE NC C4C 170.4  
C4D ND FE C1D 181.8  
FE ND C4D CHC 352.9  
FE ND C4D C3D 178.0  
FE ND C1D CHD 3.1  
FE ND C1D C2D 179.3  
C1A NA FE NB 354.4  
C1A NA FE NC 255.1  
C1A NA FE ND 178.1  
FE NA C1A C4A 180.2  
C1A NA C4A CHD 183.6  
C1A NA C4A C3A 1.9  
CHA C1A NA C2A 182.6  
NA C1A CHA C4B 2.6  
NA C1A CHA HHA 182.6  
NA C1A C2A CMA 172.6  
NA C1A C2A C3A 1.0  
C4A NA FE NB 174.7  
C4A NA FE NC 75.3  
C4A NA FE ND 358.3  
FE NA C4A C1A 179.8  
C4A NA C1A CHA 180.8  
C4A NA C1A C2A 358.2  
CHD C4A NA C3A 181.6  
NA C4A CHD C1D 358.3  
NA C4A CHD HHD 178.3  
NA C4A C3A C2A 358.7  
NA C4A C3A CAA 182.7  
C1B NB FE NC 359.5  
C1B NB FE ND 268.4  
FE NB C1B C4B 185.3  
C1B NB C4B CHA 176.0  
C1B NB C4B C3B 0.4  
CHB C1B NB C2B 183.4  
NB C1B CHB C4C 351.1  
NB C1B CHB HHB 171.1  
NB C1B C2B CMB 189.0  
NB C1B C2B C3B 1.6  
C4B NB FE NC 186.1  
C4B NB FE ND 95.0  
FE NB C4B C1B 174.5  
C4B NB C1B CHB 182.2  
C4B NB C1B C2B 358.8  
C1A CHA C4B NB 1.8  
NB C4B CHA HHA 181.7  
CHA C4B NB C3B 175.6  
NB C4B C3B C2B 0.6  
NB C4B C3B CNB 174.8  
C1C NC FE ND 4.6  
FE NC C1C C4C 168.1  
C1C NC C4C CHB 175.1  
C1C NC C4C C3C 0.1  
C4D CHC C1C NC 7.9  
CHC C1C NC C2C 184.1  
NC C1C CHC HHC 187.9  
NC C1C C2C CMC 186.6  
NC C1C C2C C3C 4.8  
C4C NC FE ND 170.4  
FE NC C4C C1C 191.4  
C4C NC C1C CHC 181.0  
C4C NC C1C C2C 357.0  
C1B CHB C4C NC 1.4  
NC C4C CHB HHB 181.4  
CHB C4C NC C3C 175.0  
NC C4C C3C C2C 2.9  
NC C4C C3C CNC 186.4  
FE ND C4D C1D 178.5  
C4D ND C1D CHD 181.7  
C4D ND C1D C2D 357.9  
CHC C4D ND C3D 174.8  
ND C4D CHC C1C 1.3  
ND C4D CHC HHC 181.3  
ND C4D C3D C2D 2.9  
ND C4D C3D CMD 187.9  
FE ND C1D C4D 181.5  
C1D ND C4D CHC 174.4  
C1D ND C4D C3D 359.5  
C4A CHD C1D ND 358.3  
CHD C1D ND C2D 183.8  
ND C1D CHD HHD 178.3  
ND C1D C2D C3D 3.9  
ND C1D C2D CAD 179.0  
CHA C1A NA C4A 180.8  
NA C1A CHA C2A 177.0  
NB C4B CHA C1A 1.8  
CHA C1A C2A CMA 350.0  
CHA C1A C2A C3A 178.4  
C4B CHA C1A HHA 180.0  
C1A CHA C4B C3B 176.8  
C2A C1A NA C4A 358.2  
NA C1A C2A CHA 182.6  
C2A C1A CHA C4B 185.5  
C2A C1A CHA HHA 5.6  
C4A C3A C2A C1A 0.2  
CMA C2A C1A C3A 171.6  
C1A C2A CMA HMA1 180.0  
C1A C2A CMA HMA2 300.0  
C1A C2A CMA HMA3 60.0  
C1A C2A C3A CAA 176.1  
NB C4B CHA C3B 185.0  
C4B CHA C1A C2A 185.5  
C1A CHA C4B HHA 180.0  
CHA C4B C3B C2B 184.8  
CHA C4B C3B CNB 359.1  
HHA CHA C1A C2A 5.6  
C1A CHA HHA C4B 180.0  
HHA CHA C4B C3B 356.8  
NC C1C CHC C4D 7.9  
CHC C4D ND C1D 174.4  
ND C4D CHC C3D 185.9  
CHC C4D C3D C2D 188.0  
CHC C4D C3D CMD 13.0  
C4D CHC C1C C2C 192.5  
C1C CHC C4D HHC 180.0  
C3D C4D ND C1D 359.5  
ND C4D C3D CHC 174.9  
C3D C4D CHC C1C 175.4  
C3D C4D CHC HHC 355.4  
C1D C2D C3D C4D 355.9  
C4D C3D C2D CAD 180.6  
C2D C3D C4D CMD 175.0  
C4D C3D CMD HMD1 180.0  
C4D C3D CMD HMD2 300.0  
C4D C3D CMD HMD3 60.0  
CHB C1B NB C4B 182.2  
NB C1B CHB C2B 176.0  
NC C4C CHB C1B 1.4  
CHB C1B C2B CMB 5.5  
CHB C1B C2B C3B 178.2  
C4C CHB C1B HHB 180.0  
C1B CHB C4C C3C 175.5  
C2B C1B NB C4B 358.8  
NB C1B C2B CHB 183.5  
C2B C1B CHB C4C 175.1  
C2B C1B CHB HHB 355.2  
C4B C3B C2B C1B 358.6  
CMB C2B C1B C3B 187.4  
C1B C2B CMB HMB1 180.0  
C1B C2B CMB HMB2 300.0  
C1B C2B CMB HMB3 60.0  
C1B C2B C3B CNB 184.3  
NC C4C CHB C3C 185.9  
C4C CHB C1B C2B 175.1  
C1B CHB C4C HHB 180.0  
CHB C4C C3C C2C 188.0  
CHB C4C C3C CNC 11.5  
HHB CHB C1B C2B 355.2  
C1B CHB HHB C4C 180.0  
HHB CHB C4C C3C 355.5  
NA C4A CHD C3A 178.1  
ND C1D CHD C4A 358.3  
CHD C4A C3A C2A 177.0  
CHD C4A C3A CAA 1.1  
C4A CHD C1D C2D 182.7  
C1D CHD C4A HHD 180.0  
NA C4A C3A CHD 181.6  
C1A C2A C3A C4A 0.2  
C3A C4A CHD C1D 180.2  
C3A C4A CHD HHD 0.2  
CMA C2A C3A C4A 188.7  
C2A C3A C4A CAA 175.9  
C4A C3A CAA O1A 121.0  
C4A C3A CAA O2A 326.2  
CHC C1C NC C4C 181.0  
NC C1C CHC C2C 175.4  
C1C CHC C4D C3D 175.4  
C4D CHC C1C HHC 180.0  
CHC C1C C2C CMC 2.5  
CHC C1C C2C C3C 180.8  
C2C C1C NC C4C 357.0  
NC C1C C2C CHC 184.0  
C2C C1C CHC HHC 12.5  
C4C C3C C2C C1C 355.3  
CMC C2C C1C C3C 181.7  
C1C C2C CMC HMC1 89.0  
C1C C2C CMC HMC2 209.0  
C1C C2C CMC HMC3 329.0  
C1C C2C C3C CNC 171.8  
HHC CHC C4D C3D 355.4  
C4D CHC HHC C1C 180.0  
HHC CHC C1C C2C 12.5  
NB C4B C3B CHA 175.7  
C3B C4B CHA HHA 356.8  
C1B C2B C3B C4B 358.6  
CMB C2B C3B C4B 171.5  
C2B C3B C4B CNB 185.8  
C4B C3B CNB HNB1 180.0  
C4B C3B CNB HNB2 300.0  
C4B C3B CNB HNB3 60.0  
ND C1D CHD C2D 175.6  
C1D CHD C4A C3A 180.2  
C4A CHD C1D HHD 180.0  
CHD C1D C2D C3D 180.0  
CHD C1D C2D CAD 355.1  
ND C1D C2D CHD 184.0  
C4D C3D C2D C1D 355.9  
C2D C1D CHD HHD 2.7  
C3D C2D C1D CAD 184.9  
C1D C2D C3D CMD 170.6  
C1D C2D CAD O1D 356.9  
C1D C2D CAD O2D 153.3  
HHD CHD C4A C3A 0.2  
C4A CHD HHD C1D 180.0  
HHD CHD C1D C2D 2.7  
NC C4C C3C CHB 174.9  
C3C C4C CHB HHB 355.5  
C1C C2C C3C C4C 355.3  
CMC C2C C3C C4C 173.6  
C2C C3C C4C CNC 176.5  
C4C C3C CNC HNC1 87.9  
C4C C3C CNC HNC2 208.0  
C4C C3C CNC HNC3 327.9  
C1A C2A CMA C3A 189.9  
C4A C3A C2A CMA 188.7  
CMA C2A C3A CAA 4.6  
HMA1 CMA C2A HMA2 240.0  
HMA1 CMA C2A HMA3 120.0  
HMA2 CMA C2A HMA3 240.0  
C1A C2A C3A CMA 171.5  
C4A C3A C2A CAA 184.1  
C3A C2A CMA HMA1 350.1  
C3A C2A CMA HMA2 110.1  
C3A C2A CMA HMA3 230.1  
C2A C3A CAA O1A 305.8  
C2A C3A CAA O2A 151.0  
HMA1 CMA C2A C3A 350.1  
C2A CMA HMA1 HMA2 120.0  
C2A CMA HMA1 HMA3 240.0  
HMA2 CMA HMA1 HMA3 120.0  
HMA2 CMA C2A C3A 110.1  
C2A CMA HMA2 HMA1 240.0  
C2A CMA HMA2 HMA3 120.0  
HMA1 CMA HMA2 HMA3 240.0  
HMA3 CMA C2A C3A 230.1  
C2A CMA HMA3 HMA1 120.0  
C2A CMA HMA3 HMA2 240.0  
HMA1 CMA HMA3 HMA2 120.0  
C4A C3A CAA C2A 175.2  
O1A CAA C3A O2A 154.8  
C3A CAA O2A H2A 152.7  
C3A CAA O1A O2A 205.9  
O1A CAA O2A H2A 0.0  
C3A CAA O2A O1A 152.7  
C1B C2B CMB C3B 171.6  
C4B C3B C2B CMB 171.5  
CMB C2B C3B CNB 357.2  
HMB1 CMB C2B HMB2 239.9  
HMB1 CMB C2B HMB3 120.0  
HMB2 CMB C2B HMB3 240.0  
C1B C2B C3B CMB 187.1  
C4B C3B C2B CNB 174.3  
C3B C2B CMB HMB1 8.4  
C3B C2B CMB HMB2 128.5  
C3B C2B CMB HMB3 248.4  
C2B C3B CNB HNB1 353.3  
C2B C3B CNB HNB2 113.3  
C2B C3B CNB HNB3 233.3  
HMB1 CMB C2B C3B 8.4  
C2B CMB HMB1 HMB2 120.0  
C2B CMB HMB1 HMB3 240.0  
HMB2 CMB HMB1 HMB3 120.0  
HMB2 CMB C2B C3B 128.5  
C2B CMB HMB2 HMB1 240.0  
C2B CMB HMB2 HMB3 120.0  
HMB1 CMB HMB2 HMB3 240.0  
HMB3 CMB C2B C3B 248.4  
C2B CMB HMB3 HMB1 120.0  
C2B CMB HMB3 HMB2 240.0  
HMB1 CMB HMB3 HMB2 120.0  
C4B C3B CNB C2B 186.7  
HNB1 CNB C3B HNB2 240.0  
HNB1 CNB C3B HNB3 120.0  
HNB2 CNB C3B HNB3 240.0  
C3B CNB HNB1 HNB2 120.0  
C3B CNB HNB1 HNB3 240.0  
HNB2 CNB HNB1 HNB3 120.0  
C3B CNB HNB2 HNB1 240.0  
C3B CNB HNB2 HNB3 120.0  
HNB1 CNB HNB2 HNB3 240.0  
C3B CNB HNB3 HNB1 120.0  
C3B CNB HNB3 HNB2 240.0  
HNB1 CNB HNB3 HNB2 120.0  
C1C C2C CMC C3C 178.0  
C4C C3C C2C CMC 173.6  
CMC C2C C3C CNC 350.1  
HMC1 CMC C2C HMC2 240.0  
HMC1 CMC C2C HMC3 120.0  
HMC2 CMC C2C HMC3 240.0  
C1C C2C C3C CMC 181.7  
C4C C3C C2C CNC 183.5  
C3C C2C CMC HMC1 271.1  
C3C C2C CMC HMC2 31.0  
C3C C2C CMC HMC3 151.0  
C2C C3C CNC HNC1 272.0  
C2C C3C CNC HNC2 32.0  
C2C C3C CNC HNC3 152.0  
HMC1 CMC C2C C3C 271.1  
C2C CMC HMC1 HMC2 120.0  
C2C CMC HMC1 HMC3 240.0  
HMC2 CMC HMC1 HMC3 120.0  
HMC2 CMC C2C C3C 31.0  
C2C CMC HMC2 HMC1 240.0  
C2C CMC HMC2 HMC3 120.0  
HMC1 CMC HMC2 HMC3 240.0  
HMC3 CMC C2C C3C 151.0  
C2C CMC HMC3 HMC1 120.0  
C2C CMC HMC3 HMC2 240.0  
HMC1 CMC HMC3 HMC2 120.0  
C4C C3C CNC C2C 176.0  
HNC1 CNC C3C HNC2 240.0  
HNC1 CNC C3C HNC3 120.0  
HNC2 CNC C3C HNC3 240.0  
C3C CNC HNC1 HNC2 120.0  
C3C CNC HNC1 HNC3 240.0  
HNC2 CNC HNC1 HNC3 120.0  
C3C CNC HNC2 HNC1 239.9  
C3C CNC HNC2 HNC3 120.0  
HNC1 CNC HNC2 HNC3 240.0  
C3C CNC HNC3 HNC1 120.0  
C3C CNC HNC3 HNC2 240.0  
HNC1 CNC HNC3 HNC2 120.0  
C4D C3D C2D CMD 185.3  
C1D C2D C3D CAD 175.2  
C3D C2D CAD O1D 171.2  
C3D C2D CAD O2D 327.6  
C2D C3D CMD HMD1 6.0  
C2D C3D CMD HMD2 126.1  
C2D C3D CMD HMD3 246.0  
C1D C2D CAD C3D 185.7  
CAD C2D C3D CMD 355.3  
O1D CAD C2D O2D 203.6  
C2D CAD O2D H2D 204.3  
C4D C3D CMD C2D 174.0  
CMD C3D C2D CAD 355.3  
HMD1 CMD C3D HMD2 240.0  
HMD1 CMD C3D HMD3 120.0  
HMD2 CMD C3D HMD3 240.0  
C3D CMD HMD1 HMD2 120.0  
C3D CMD HMD1 HMD3 240.0  
HMD2 CMD HMD1 HMD3 120.0  
C3D CMD HMD2 HMD1 240.0  
C3D CMD HMD2 HMD3 120.0  
HMD1 CMD HMD2 HMD3 240.0  
C3D CMD HMD3 HMD1 120.1  
C3D CMD HMD3 HMD2 240.0  
HMD1 CMD HMD3 HMD2 120.0  
C2D CAD O1D O2D 156.0  
O1D CAD O2D H2D 0.0  
C2D CAD O2D O1D 204.3