PDB Chemical Component HCA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HCA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.660 |
1.508 |
C1 |
O1 |
1.165 |
1.207 |
C1 |
O2 |
1.306 |
1.342 |
C2 |
C3 |
1.474 |
1.529 |
C2 |
H21 |
1.114 |
1.090 |
C2 |
H22 |
1.116 |
1.090 |
C3 |
C4 |
1.533 |
1.530 |
C3 |
C7 |
1.560 |
1.506 |
C3 |
O7 |
1.524 |
1.428 |
C4 |
C5 |
1.555 |
1.529 |
C4 |
H41 |
1.115 |
1.090 |
C4 |
H42 |
1.115 |
1.090 |
C5 |
C6 |
1.527 |
1.506 |
C5 |
H51 |
1.114 |
1.090 |
C5 |
H52 |
1.115 |
1.089 |
C6 |
O3 |
1.283 |
1.208 |
C6 |
O4 |
1.238 |
1.341 |
C7 |
O5 |
1.297 |
1.208 |
C7 |
O6 |
1.177 |
1.342 |
O2 |
HO2 |
0.950 |
0.967 |
O4 |
HO4 |
0.951 |
0.967 |
O6 |
HO6 |
0.950 |
0.967 |
O7 |
HO7 |
0.950 |
0.966 |
Bond Angles for HCA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
111.3 |
120.0 |
C2 |
C1 |
O2 |
107.3 |
120.0 |
C1 |
C2 |
C3 |
111.1 |
109.4 |
C1 |
C2 |
H21 |
111.6 |
109.4 |
C1 |
C2 |
H22 |
111.6 |
109.4 |
O1 |
C1 |
O2 |
141.5 |
120.0 |
C1 |
O2 |
HO2 |
107.3 |
120.0 |
C3 |
C2 |
H21 |
111.6 |
109.5 |
C3 |
C2 |
H22 |
111.6 |
109.5 |
C2 |
C3 |
C4 |
125.8 |
109.5 |
C2 |
C3 |
C7 |
112.8 |
109.5 |
C2 |
C3 |
O7 |
107.8 |
109.5 |
H21 |
C2 |
H22 |
98.8 |
109.5 |
C4 |
C3 |
C7 |
104.2 |
109.5 |
C4 |
C3 |
O7 |
98.3 |
109.4 |
C3 |
C4 |
C5 |
112.9 |
109.5 |
C3 |
C4 |
H41 |
110.9 |
109.4 |
C3 |
C4 |
H42 |
111.0 |
109.4 |
C7 |
C3 |
O7 |
105.4 |
109.5 |
C3 |
C7 |
O5 |
119.8 |
120.0 |
C3 |
C7 |
O6 |
119.2 |
120.0 |
C3 |
O7 |
HO7 |
107.8 |
106.9 |
C5 |
C4 |
H41 |
110.9 |
109.5 |
C5 |
C4 |
H42 |
110.9 |
109.5 |
C4 |
C5 |
C6 |
120.8 |
109.6 |
C4 |
C5 |
H51 |
108.2 |
109.4 |
C4 |
C5 |
H52 |
108.2 |
109.4 |
H41 |
C4 |
H42 |
99.3 |
109.4 |
C6 |
C5 |
H51 |
108.1 |
109.4 |
C6 |
C5 |
H52 |
108.1 |
109.5 |
C5 |
C6 |
O3 |
114.1 |
119.9 |
C5 |
C6 |
O4 |
119.0 |
120.1 |
H51 |
C5 |
H52 |
101.8 |
109.5 |
O3 |
C6 |
O4 |
126.8 |
120.0 |
C6 |
O4 |
HO4 |
119.0 |
120.0 |
O5 |
C7 |
O6 |
120.9 |
119.9 |
C7 |
O6 |
HO6 |
119.2 |
120.1 |
Torsion Angles for HCA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O2 |
179.5 |
179.9 |
C2 |
C1 |
O2 |
HO2 |
179.9 |
180.0 |
C3 |
C2 |
C1 |
H21 |
234.7 |
120.0 |
C3 |
C2 |
C1 |
H22 |
125.3 |
240.1 |
C1 |
C2 |
C3 |
C4 |
296.3 |
180.0 |
C1 |
C2 |
C3 |
C7 |
167.1 |
60.0 |
C1 |
C2 |
C3 |
O7 |
51.1 |
299.9 |
H21 |
C2 |
C1 |
H22 |
250.6 |
120.0 |
C2 |
C1 |
O1 |
O2 |
180.8 |
180.1 |
O1 |
C1 |
C2 |
C3 |
138.9 |
360.0 |
O1 |
C1 |
C2 |
H21 |
264.2 |
240.0 |
O1 |
C1 |
C2 |
H22 |
13.7 |
119.9 |
O1 |
C1 |
O2 |
HO2 |
0.7 |
0.0 |
C2 |
C1 |
O2 |
O1 |
179.2 |
179.9 |
O2 |
C1 |
C2 |
C3 |
319.5 |
180.1 |
O2 |
C1 |
C2 |
H21 |
84.7 |
60.0 |
O2 |
C1 |
C2 |
H22 |
194.2 |
300.0 |
C3 |
C2 |
C1 |
O1 |
138.9 |
360.0 |
C3 |
C2 |
C1 |
O2 |
319.5 |
180.1 |
C1 |
C2 |
C3 |
H21 |
125.3 |
240.0 |
C1 |
C2 |
C3 |
H22 |
234.8 |
119.9 |
H21 |
C2 |
C3 |
H22 |
109.5 |
239.9 |
C4 |
C3 |
C2 |
C7 |
129.2 |
120.0 |
C4 |
C3 |
C2 |
O7 |
245.3 |
240.1 |
C2 |
C3 |
C4 |
C5 |
187.8 |
180.0 |
C2 |
C3 |
C4 |
H41 |
313.1 |
59.9 |
C2 |
C3 |
C4 |
H42 |
62.5 |
300.0 |
C7 |
C3 |
C2 |
O7 |
116.0 |
120.1 |
C2 |
C3 |
C7 |
O5 |
239.8 |
240.0 |
C2 |
C3 |
C7 |
O6 |
62.5 |
60.0 |
C2 |
C3 |
O7 |
HO7 |
180.0 |
300.1 |
H21 |
C2 |
C1 |
O1 |
264.2 |
240.0 |
H21 |
C2 |
C1 |
O2 |
84.7 |
60.0 |
C1 |
C2 |
H21 |
C3 |
235.0 |
120.0 |
C1 |
C2 |
H21 |
H22 |
117.5 |
240.0 |
C3 |
C2 |
H21 |
H22 |
242.5 |
120.1 |
H21 |
C2 |
C3 |
C4 |
171.1 |
300.0 |
H21 |
C2 |
C3 |
C7 |
41.8 |
180.0 |
H21 |
C2 |
C3 |
O7 |
285.8 |
59.9 |
H22 |
C2 |
C1 |
O1 |
13.7 |
119.9 |
H22 |
C2 |
C1 |
O2 |
194.2 |
300.0 |
C1 |
C2 |
H22 |
C3 |
125.0 |
240.1 |
C1 |
C2 |
H22 |
H21 |
242.5 |
120.0 |
C3 |
C2 |
H22 |
H21 |
117.5 |
239.9 |
H22 |
C2 |
C3 |
C4 |
61.6 |
60.1 |
H22 |
C2 |
C3 |
C7 |
292.4 |
300.1 |
H22 |
C2 |
C3 |
O7 |
176.3 |
180.0 |
C4 |
C3 |
C2 |
H21 |
171.1 |
300.0 |
C4 |
C3 |
C2 |
H22 |
61.6 |
60.1 |
C2 |
C3 |
C4 |
C7 |
227.4 |
240.0 |
C2 |
C3 |
C4 |
O7 |
119.1 |
119.9 |
C7 |
C3 |
C4 |
O7 |
251.7 |
240.0 |
C4 |
C3 |
C7 |
O5 |
100.1 |
120.0 |
C4 |
C3 |
C7 |
O6 |
282.8 |
300.0 |
C4 |
C3 |
O7 |
HO7 |
311.9 |
60.0 |
C5 |
C4 |
C3 |
H41 |
234.7 |
120.1 |
C5 |
C4 |
C3 |
H42 |
125.3 |
240.0 |
C3 |
C4 |
C5 |
C6 |
198.3 |
180.0 |
C3 |
C4 |
C5 |
H51 |
323.6 |
60.0 |
C3 |
C4 |
C5 |
H52 |
73.0 |
300.0 |
H41 |
C4 |
C3 |
H42 |
250.6 |
119.9 |
C7 |
C3 |
C2 |
H21 |
41.8 |
180.0 |
C7 |
C3 |
C2 |
H22 |
292.4 |
300.1 |
C2 |
C3 |
C7 |
C4 |
139.6 |
120.0 |
C2 |
C3 |
C7 |
O7 |
242.6 |
240.0 |
C4 |
C3 |
C7 |
O7 |
102.9 |
119.9 |
C7 |
C3 |
C4 |
C5 |
320.4 |
300.0 |
C7 |
C3 |
C4 |
H41 |
85.7 |
179.9 |
C7 |
C3 |
C4 |
H42 |
195.1 |
60.0 |
C7 |
C3 |
O7 |
HO7 |
59.2 |
180.0 |
O5 |
C7 |
C3 |
O6 |
177.3 |
180.0 |
C3 |
C7 |
O6 |
HO6 |
180.0 |
180.0 |
O7 |
C3 |
C2 |
H21 |
285.8 |
59.9 |
O7 |
C3 |
C2 |
H22 |
176.3 |
180.0 |
C2 |
C3 |
O7 |
C4 |
228.1 |
240.1 |
C2 |
C3 |
O7 |
C7 |
120.8 |
120.1 |
C4 |
C3 |
O7 |
C7 |
252.7 |
240.0 |
O7 |
C3 |
C4 |
C5 |
68.7 |
60.0 |
O7 |
C3 |
C4 |
H41 |
194.0 |
299.9 |
O7 |
C3 |
C4 |
H42 |
303.4 |
180.0 |
O7 |
C3 |
C7 |
O5 |
357.2 |
0.0 |
O7 |
C3 |
C7 |
O6 |
179.9 |
180.1 |
C5 |
C4 |
C3 |
C7 |
320.4 |
300.0 |
C5 |
C4 |
C3 |
O7 |
68.7 |
60.0 |
C3 |
C4 |
C5 |
H41 |
125.3 |
240.0 |
C3 |
C4 |
C5 |
H42 |
234.7 |
120.0 |
H41 |
C4 |
C5 |
H42 |
109.4 |
240.0 |
C6 |
C5 |
C4 |
H51 |
234.7 |
120.0 |
C6 |
C5 |
C4 |
H52 |
125.2 |
239.9 |
C4 |
C5 |
C6 |
O3 |
35.3 |
0.0 |
C4 |
C5 |
C6 |
O4 |
213.8 |
180.0 |
H51 |
C5 |
C4 |
H52 |
250.5 |
119.9 |
H41 |
C4 |
C3 |
C7 |
85.7 |
179.9 |
H41 |
C4 |
C3 |
O7 |
194.0 |
299.9 |
C3 |
C4 |
H41 |
C5 |
233.6 |
120.1 |
C3 |
C4 |
H41 |
H42 |
116.8 |
240.1 |
C5 |
C4 |
H41 |
H42 |
243.2 |
120.0 |
H41 |
C4 |
C5 |
C6 |
73.0 |
300.0 |
H41 |
C4 |
C5 |
H51 |
198.3 |
180.0 |
H41 |
C4 |
C5 |
H52 |
307.8 |
60.1 |
H42 |
C4 |
C3 |
C7 |
195.1 |
60.0 |
H42 |
C4 |
C3 |
O7 |
303.4 |
180.0 |
C3 |
C4 |
H42 |
C5 |
126.4 |
239.9 |
C3 |
C4 |
H42 |
H41 |
243.2 |
119.9 |
C5 |
C4 |
H42 |
H41 |
116.8 |
240.0 |
H42 |
C4 |
C5 |
C6 |
323.6 |
60.0 |
H42 |
C4 |
C5 |
H51 |
88.9 |
300.0 |
H42 |
C4 |
C5 |
H52 |
198.4 |
180.0 |
C6 |
C5 |
C4 |
H41 |
73.0 |
300.0 |
C6 |
C5 |
C4 |
H42 |
323.6 |
60.0 |
C4 |
C5 |
C6 |
H51 |
125.3 |
240.0 |
C4 |
C5 |
C6 |
H52 |
234.8 |
120.0 |
H51 |
C5 |
C6 |
H52 |
109.5 |
240.0 |
O3 |
C6 |
C5 |
O4 |
181.6 |
180.0 |
C5 |
C6 |
O4 |
HO4 |
180.0 |
180.0 |
H51 |
C5 |
C4 |
H41 |
198.3 |
180.0 |
H51 |
C5 |
C4 |
H42 |
88.9 |
300.0 |
C4 |
C5 |
H51 |
C6 |
227.5 |
120.0 |
C4 |
C5 |
H51 |
H52 |
113.8 |
240.1 |
C6 |
C5 |
H51 |
H52 |
246.2 |
120.0 |
H51 |
C5 |
C6 |
O3 |
270.1 |
120.0 |
H51 |
C5 |
C6 |
O4 |
88.5 |
300.0 |
H52 |
C5 |
C4 |
H41 |
307.8 |
60.1 |
H52 |
C5 |
C4 |
H42 |
198.4 |
180.0 |
C4 |
C5 |
H52 |
C6 |
132.4 |
239.9 |
C4 |
C5 |
H52 |
H51 |
246.2 |
119.9 |
C6 |
C5 |
H52 |
H51 |
113.8 |
240.0 |
H52 |
C5 |
C6 |
O3 |
160.6 |
240.0 |
H52 |
C5 |
C6 |
O4 |
339.0 |
60.0 |
O3 |
C6 |
C5 |
H51 |
270.1 |
120.0 |
O3 |
C6 |
C5 |
H52 |
160.6 |
240.0 |
C5 |
C6 |
O3 |
O4 |
178.3 |
180.0 |
O3 |
C6 |
O4 |
HO4 |
358.2 |
359.9 |
O4 |
C6 |
C5 |
H51 |
88.5 |
300.0 |
O4 |
C6 |
C5 |
H52 |
339.0 |
60.0 |
C5 |
C6 |
O4 |
O3 |
181.8 |
180.0 |
O5 |
C7 |
C3 |
O7 |
357.2 |
0.0 |
C3 |
C7 |
O5 |
O6 |
182.8 |
180.0 |
O5 |
C7 |
O6 |
HO6 |
2.7 |
0.1 |
O6 |
C7 |
C3 |
O7 |
179.9 |
180.1 |
C3 |
C7 |
O6 |
O5 |
177.3 |
180.0 |