PDB Chemical Component HBE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HBE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O11 |
C10 |
1.420 |
1.428 |
C10 |
C6 |
1.521 |
1.531 |
C6 |
C5 |
1.535 |
1.514 |
C6 |
C1 |
1.522 |
1.518 |
O12 |
C1 |
1.421 |
1.437 |
C5 |
C4 |
1.509 |
1.512 |
C5 |
O7 |
1.453 |
1.429 |
C1 |
C2 |
1.513 |
1.520 |
C4 |
O8 |
1.424 |
1.429 |
C4 |
C3 |
1.530 |
1.514 |
C2 |
C3 |
1.544 |
1.515 |
C3 |
O9 |
1.409 |
1.429 |
C3 |
H1 |
1.100 |
1.090 |
C4 |
H2 |
1.100 |
1.090 |
C5 |
H3 |
1.100 |
1.090 |
C1 |
H4 |
1.100 |
1.089 |
C2 |
H5 |
1.100 |
1.090 |
C6 |
H7 |
1.100 |
1.089 |
O7 |
H8 |
0.950 |
0.968 |
O8 |
H9 |
0.950 |
0.967 |
O9 |
H10 |
0.950 |
0.968 |
C10 |
H11 |
1.100 |
1.091 |
C10 |
H12 |
1.100 |
1.090 |
O11 |
H13 |
0.950 |
0.967 |
C2 |
O12 |
2.267 |
1.420 |
Bond Angles for HBE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O11 |
C10 |
H11 |
109.3 |
109.4 |
O11 |
C10 |
H12 |
109.3 |
109.6 |
C10 |
C6 |
H7 |
107.2 |
108.8 |
C6 |
C5 |
O7 |
111.4 |
108.8 |
C6 |
C5 |
H3 |
108.3 |
108.7 |
C6 |
C1 |
H4 |
108.4 |
115.3 |
O12 |
C1 |
H4 |
109.8 |
117.7 |
C5 |
C4 |
O8 |
108.0 |
108.8 |
C5 |
C4 |
H2 |
110.0 |
108.7 |
O7 |
C5 |
H3 |
109.3 |
108.8 |
C5 |
O7 |
H8 |
109.5 |
114.0 |
C2 |
C1 |
H4 |
108.5 |
117.5 |
C1 |
C2 |
H5 |
122.5 |
116.1 |
C1 |
C2 |
O12 |
38.0 |
58.4 |
O8 |
C4 |
H2 |
111.3 |
108.8 |
C4 |
O8 |
H9 |
109.5 |
114.1 |
C4 |
C3 |
O9 |
108.8 |
108.8 |
C4 |
C3 |
H1 |
107.3 |
108.8 |
C2 |
C3 |
O9 |
109.9 |
108.8 |
C2 |
C3 |
H1 |
107.1 |
108.9 |
O9 |
C3 |
H1 |
108.8 |
108.8 |
C3 |
O9 |
H10 |
109.5 |
114.0 |
O12 |
C2 |
H5 |
111.0 |
115.5 |
H11 |
C10 |
H12 |
109.5 |
109.5 |
Torsion Angles for HBE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O11 |
C10 |
C6 |
H7 |
302.3 |
53.7 |
H11 |
C10 |
O11 |
H12 |
240.1 |
120.0 |
C10 |
C6 |
C5 |
H3 |
83.2 |
72.0 |
C10 |
C6 |
C1 |
H4 |
339.4 |
349.0 |
C6 |
C5 |
C4 |
O8 |
188.2 |
183.7 |
C6 |
C5 |
C4 |
H2 |
309.9 |
302.0 |
O7 |
C5 |
C6 |
H3 |
239.7 |
241.7 |
C6 |
C5 |
O7 |
H8 |
180.0 |
176.6 |
C1 |
C6 |
C5 |
O7 |
88.5 |
74.4 |
C1 |
C6 |
C5 |
H3 |
208.8 |
192.7 |
O12 |
C1 |
C6 |
H4 |
238.4 |
216.9 |
C2 |
C1 |
C6 |
H4 |
122.5 |
151.1 |
C6 |
C1 |
C2 |
H5 |
204.9 |
208.0 |
C6 |
C1 |
C2 |
O12 |
122.1 |
102.8 |
C6 |
C1 |
O12 |
H4 |
120.9 |
142.2 |
C2 |
C1 |
O12 |
H4 |
245.5 |
253.6 |
O12 |
C1 |
C2 |
H5 |
82.8 |
105.2 |
C1 |
C2 |
O12 |
C1 |
-0.0 |
-0.0 |
O8 |
C4 |
C5 |
H2 |
238.3 |
241.7 |
C5 |
C4 |
O8 |
H9 |
180.0 |
176.6 |
C5 |
C4 |
C3 |
O9 |
186.4 |
192.2 |
C5 |
C4 |
C3 |
H1 |
68.8 |
73.7 |
C6 |
C5 |
O7 |
H3 |
119.6 |
118.2 |
O7 |
C5 |
C4 |
O8 |
65.7 |
62.8 |
O7 |
C5 |
C4 |
H2 |
187.4 |
181.1 |
C6 |
C1 |
C2 |
H4 |
237.6 |
209.5 |
O12 |
C1 |
C2 |
H4 |
115.4 |
106.7 |
C1 |
C2 |
C3 |
O9 |
119.0 |
140.5 |
C1 |
C2 |
C3 |
H1 |
237.0 |
259.0 |
O12 |
C2 |
C1 |
H5 |
277.2 |
254.8 |
C5 |
C4 |
O8 |
H2 |
120.9 |
118.3 |
O8 |
C4 |
C3 |
O9 |
69.0 |
71.3 |
O8 |
C4 |
C3 |
H1 |
311.4 |
312.8 |
C2 |
C3 |
C4 |
O9 |
123.5 |
120.8 |
C2 |
C3 |
C4 |
H1 |
241.1 |
239.2 |
O9 |
C3 |
C4 |
H1 |
117.6 |
118.5 |
C4 |
C3 |
O9 |
H10 |
180.0 |
301.5 |
C4 |
C3 |
C2 |
O9 |
237.0 |
239.2 |
C4 |
C3 |
C2 |
H1 |
119.0 |
120.7 |
O9 |
C3 |
C2 |
H1 |
241.9 |
241.5 |
C2 |
C3 |
O9 |
H10 |
53.6 |
178.5 |
C4 |
C3 |
O9 |
H1 |
243.4 |
241.5 |
C2 |
C3 |
O9 |
H1 |
117.0 |
118.5 |
C4 |
C3 |
H1 |
O9 |
117.6 |
118.5 |
C2 |
C3 |
H1 |
O9 |
241.3 |
241.5 |
H1 |
C3 |
O9 |
H10 |
296.6 |
60.0 |
C5 |
C4 |
H2 |
O8 |
240.3 |
241.6 |
H2 |
C4 |
O8 |
H9 |
59.1 |
58.2 |
H2 |
C4 |
C3 |
O9 |
305.7 |
313.0 |
H2 |
C4 |
C3 |
H1 |
188.1 |
194.5 |
C6 |
C5 |
H3 |
O7 |
238.5 |
241.7 |
H3 |
C5 |
C4 |
O8 |
306.3 |
304.4 |
H3 |
C5 |
C4 |
H2 |
68.0 |
62.8 |
H3 |
C5 |
O7 |
H8 |
60.4 |
58.4 |
H4 |
C1 |
C2 |
H5 |
327.4 |
358.4 |
H4 |
C1 |
C2 |
O12 |
244.6 |
253.3 |
H5 |
C2 |
C1 |
H4 |
327.4 |
358.4 |
C1 |
C2 |
H5 |
O12 |
319.2 |
294.4 |
H5 |
C2 |
C3 |
O9 |
315.4 |
286.4 |
H5 |
C2 |
C3 |
H1 |
73.5 |
44.9 |
H7 |
C6 |
C5 |
O7 |
207.2 |
195.1 |
H7 |
C6 |
C5 |
H3 |
327.4 |
313.4 |
H7 |
C6 |
C1 |
H4 |
96.2 |
107.6 |
H8 |
O7 |
C5 |
H3 |
60.4 |
58.4 |
H9 |
O8 |
C4 |
H2 |
59.1 |
58.2 |
H10 |
O9 |
C3 |
H1 |
296.6 |
60.0 |
O11 |
C10 |
H11 |
H12 |
119.7 |
239.9 |
H11 |
C10 |
C6 |
H7 |
182.2 |
173.6 |
O11 |
C10 |
H12 |
H11 |
240.2 |
120.0 |
H12 |
C10 |
C6 |
H7 |
62.4 |
293.6 |
H13 |
O11 |
C10 |
H11 |
300.1 |
60.1 |
H13 |
O11 |
C10 |
H12 |
59.9 |
300.0 |
C2 |
O12 |
C1 |
H4 |
114.5 |
106.4 |
O12 |
C2 |
C1 |
H4 |
244.6 |
253.3 |
C1 |
C2 |
O12 |
H5 |
116.3 |
106.1 |
O12 |
C2 |
C3 |
O9 |
80.5 |
71.8 |
O12 |
C2 |
C3 |
H1 |
198.5 |
190.3 |