PDB Chemical Component H6P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for H6P
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O14 |
P13 |
1.526 |
1.480 |
| O15 |
P13 |
1.475 |
1.610 |
| O16 |
P13 |
1.606 |
1.610 |
| P13 |
O29 |
1.629 |
1.610 |
| O15 |
HO15 |
0.950 |
0.967 |
| O16 |
P17 |
1.603 |
1.610 |
| O19 |
P17 |
1.526 |
1.480 |
| P17 |
O20 |
1.509 |
1.610 |
| P17 |
O18 |
1.540 |
1.610 |
| O18 |
HO18 |
0.950 |
0.967 |
| O20 |
HO20 |
0.950 |
0.968 |
| C21 |
C30 |
1.504 |
1.507 |
| C21 |
H21 |
1.100 |
1.091 |
| C21 |
H21A |
1.100 |
1.090 |
| C21 |
H21B |
1.100 |
1.089 |
| C30 |
C27 |
1.373 |
1.310 |
| C28 |
C27 |
1.497 |
1.507 |
| C27 |
H27 |
1.081 |
1.080 |
| O29 |
C28 |
1.441 |
1.429 |
| C28 |
H28 |
1.100 |
1.090 |
| C28 |
H28A |
1.100 |
1.090 |
| C30 |
C31 |
1.544 |
1.507 |
| C31 |
O33 |
1.521 |
1.429 |
| C31 |
H31 |
1.100 |
1.090 |
| C31 |
H31A |
1.100 |
1.091 |
| O33 |
HO33 |
0.950 |
0.968 |
Bond Angles for H6P
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O14 |
P13 |
O29 |
103.7 |
109.5 |
| O15 |
P13 |
O29 |
106.4 |
109.5 |
| O16 |
P13 |
O29 |
105.1 |
109.5 |
| P13 |
O29 |
C28 |
124.8 |
123.0 |
| O16 |
P17 |
O20 |
103.5 |
109.4 |
| O16 |
P17 |
O18 |
113.0 |
109.5 |
| O19 |
P17 |
O20 |
108.9 |
109.5 |
| O18 |
P17 |
O20 |
114.1 |
109.5 |
| P17 |
O20 |
HO20 |
109.5 |
114.0 |
| P17 |
O18 |
HO18 |
109.5 |
114.0 |
| C30 |
C21 |
H21 |
109.5 |
109.4 |
| C30 |
C21 |
H21A |
109.5 |
109.4 |
| C30 |
C21 |
H21B |
109.5 |
109.5 |
| C21 |
C30 |
C27 |
126.9 |
120.0 |
| C21 |
C30 |
C31 |
112.3 |
120.0 |
| H21 |
C21 |
H21A |
109.5 |
109.4 |
| H21 |
C21 |
H21B |
109.5 |
109.5 |
| H21A |
C21 |
H21B |
109.5 |
109.5 |
| C30 |
C27 |
H27 |
115.7 |
120.0 |
| C28 |
C27 |
H27 |
115.7 |
120.0 |
| O29 |
C28 |
H28 |
109.0 |
109.5 |
| O29 |
C28 |
H28A |
109.1 |
109.4 |
| H28 |
C28 |
H28A |
109.9 |
109.5 |
| C30 |
C31 |
O33 |
102.2 |
109.5 |
| C30 |
C31 |
H31 |
112.0 |
109.5 |
| C30 |
C31 |
H31A |
112.0 |
109.5 |
| O33 |
C31 |
H31 |
112.0 |
109.5 |
| O33 |
C31 |
H31A |
112.0 |
109.4 |
| C31 |
O33 |
HO33 |
109.5 |
114.0 |
| H31 |
C31 |
H31A |
106.8 |
109.5 |
Torsion Angles for H6P
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O15 |
P13 |
O14 |
O29 |
243.3 |
240.0 |
| O16 |
P13 |
O14 |
O29 |
114.2 |
120.0 |
| O14 |
P13 |
O29 |
C28 |
180.0 |
305.0 |
| O14 |
P13 |
O15 |
O29 |
115.2 |
120.0 |
| O16 |
P13 |
O15 |
O29 |
247.4 |
240.0 |
| O15 |
P13 |
O29 |
C28 |
303.9 |
65.0 |
| O14 |
P13 |
O16 |
O29 |
246.5 |
240.0 |
| O15 |
P13 |
O16 |
O29 |
113.4 |
120.0 |
| O16 |
P13 |
O29 |
C28 |
58.7 |
185.0 |
| P13 |
O29 |
C28 |
H28 |
170.5 |
59.9 |
| P13 |
O29 |
C28 |
H28A |
50.5 |
300.0 |
| HO15 |
O15 |
P13 |
O29 |
244.8 |
60.1 |
| P17 |
O16 |
P13 |
O29 |
77.4 |
165.0 |
| O19 |
P17 |
O16 |
O20 |
246.0 |
240.0 |
| O18 |
P17 |
O16 |
O20 |
123.9 |
120.0 |
| O16 |
P17 |
O20 |
HO20 |
249.1 |
60.0 |
| O16 |
P17 |
O18 |
HO18 |
117.8 |
180.0 |
| O16 |
P17 |
O19 |
O20 |
110.1 |
120.0 |
| O18 |
P17 |
O19 |
O20 |
232.9 |
240.0 |
| O19 |
P17 |
O20 |
HO20 |
360.0 |
180.0 |
| O19 |
P17 |
O18 |
HO18 |
360.0 |
60.0 |
| O16 |
P17 |
O20 |
O18 |
123.2 |
120.0 |
| O20 |
P17 |
O18 |
HO18 |
235.7 |
300.0 |
| O16 |
P17 |
O18 |
O20 |
242.1 |
240.0 |
| O19 |
P17 |
O18 |
O20 |
124.3 |
120.0 |
| O18 |
P17 |
O20 |
HO20 |
125.9 |
300.0 |
| HO18 |
O18 |
P17 |
O20 |
235.7 |
300.0 |
| H21 |
C21 |
C30 |
H21A |
240.0 |
240.1 |
| H21 |
C21 |
C30 |
H21B |
120.0 |
120.0 |
| H21A |
C21 |
C30 |
H21B |
240.0 |
239.9 |
| C21 |
C30 |
C27 |
H27 |
179.0 |
185.4 |
| C21 |
C30 |
C31 |
O33 |
88.2 |
180.0 |
| C21 |
C30 |
C31 |
H31 |
208.3 |
300.0 |
| C21 |
C30 |
C31 |
H31A |
328.2 |
60.0 |
| C30 |
C21 |
H21 |
H21A |
120.0 |
119.9 |
| C30 |
C21 |
H21 |
H21B |
240.0 |
240.0 |
| H21 |
C21 |
C30 |
C27 |
180.0 |
54.9 |
| H21 |
C21 |
C30 |
C31 |
359.2 |
234.9 |
| H21A |
C21 |
H21 |
H21B |
120.0 |
120.0 |
| C30 |
C21 |
H21A |
H21 |
240.0 |
240.1 |
| C30 |
C21 |
H21A |
H21B |
120.0 |
120.1 |
| H21A |
C21 |
C30 |
C27 |
300.0 |
174.8 |
| H21A |
C21 |
C30 |
C31 |
119.2 |
354.8 |
| H21 |
C21 |
H21A |
H21B |
240.0 |
240.0 |
| C30 |
C21 |
H21B |
H21 |
120.0 |
120.0 |
| C30 |
C21 |
H21B |
H21A |
240.0 |
240.0 |
| H21B |
C21 |
C30 |
C27 |
60.0 |
294.9 |
| H21B |
C21 |
C30 |
C31 |
239.2 |
114.9 |
| H21 |
C21 |
H21B |
H21A |
120.0 |
120.0 |
| C27 |
C30 |
C21 |
H21 |
180.0 |
54.9 |
| C27 |
C30 |
C21 |
H21A |
300.0 |
174.8 |
| C27 |
C30 |
C21 |
H21B |
60.0 |
294.9 |
| C21 |
C30 |
C27 |
C31 |
179.1 |
180.0 |
| C28 |
C27 |
C30 |
H27 |
180.0 |
180.1 |
| P13 |
O29 |
C28 |
C27 |
290.5 |
180.0 |
| C21 |
C30 |
C27 |
C28 |
359.0 |
5.5 |
| C30 |
C27 |
C28 |
H27 |
180.0 |
179.9 |
| O29 |
C28 |
C27 |
H27 |
302.1 |
315.3 |
| H28 |
C28 |
O29 |
H28A |
120.0 |
120.0 |
| H28 |
C28 |
C27 |
H27 |
62.1 |
75.4 |
| O29 |
C28 |
H28 |
H28A |
240.5 |
240.1 |
| H28A |
C28 |
C27 |
H27 |
182.1 |
195.4 |
| O29 |
C28 |
H28A |
H28 |
119.5 |
120.0 |
| C31 |
C30 |
C21 |
H21 |
359.2 |
234.9 |
| C31 |
C30 |
C21 |
H21A |
119.2 |
354.8 |
| C31 |
C30 |
C21 |
H21B |
239.2 |
114.9 |
| C21 |
C30 |
C31 |
C27 |
180.8 |
180.0 |
| C31 |
C30 |
C27 |
H27 |
359.9 |
5.4 |
| O33 |
C31 |
C30 |
H31 |
240.0 |
240.0 |
| O33 |
C31 |
C30 |
H31A |
120.0 |
119.9 |
| C30 |
C31 |
O33 |
HO33 |
180.0 |
180.0 |
| H31 |
C31 |
C30 |
H31A |
240.0 |
240.0 |
| C30 |
C31 |
O33 |
H31 |
120.0 |
120.0 |
| C30 |
C31 |
O33 |
H31A |
240.0 |
240.0 |
| H31 |
C31 |
O33 |
H31A |
120.0 |
120.0 |
| C30 |
C31 |
H31 |
O33 |
245.9 |
240.0 |
| C30 |
C31 |
H31 |
H31A |
122.9 |
120.0 |
| O33 |
C31 |
H31 |
H31A |
237.1 |
240.0 |
| H31 |
C31 |
O33 |
HO33 |
60.0 |
59.9 |
| C30 |
C31 |
H31A |
O33 |
114.1 |
120.0 |
| C30 |
C31 |
H31A |
H31 |
237.0 |
240.0 |
| O33 |
C31 |
H31A |
H31 |
122.9 |
120.0 |
| H31A |
C31 |
O33 |
HO33 |
300.0 |
299.9 |
| HO33 |
O33 |
C31 |
H31 |
60.0 |
59.9 |
| HO33 |
O33 |
C31 |
H31A |
300.0 |
299.9 |