PDB Chemical Component H1B

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for H1B

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 C05 1.512 1.531
C05 N08 1.466 1.464
N08 C09 1.372 1.360
N08 C32 1.396 1.342
C09 C11 1.354 1.357
C11 C12 1.499 1.483
C11 C26 1.443 1.467
C12 C13 1.393 1.394
C12 C20 1.393 1.393
C13 C15 1.388 1.380
C15 C17 1.379 1.383
C17 C19 1.389 1.383
C19 C20 1.393 1.380
C19 C22 1.497 1.508
C22 F23 1.340 1.399
C22 F24 1.341 1.399
C22 F25 1.306 1.399
C26 S27 1.740 1.757
C26 C31 1.423 1.396
S27 C28 1.725 1.755
C28 C29 1.361 1.338
C28 C34 1.447 1.471
C29 C31 1.408 1.399
C31 C32 1.454 1.474
C32 O33 1.234 1.218
C34 N35 1.344 1.380
C34 N37 1.271 1.307
N37 C39 1.447 1.464
C39 C41 1.510 1.526
C39 C53 1.518 1.526
C41 C44 1.514 1.531
C44 S47 1.765 1.816
S47 O48 1.435 1.420
S47 O49 1.434 1.422
S47 C50 1.766 1.817
C50 C53 1.531 1.530
C01 H011 1.100 1.090
C01 H012 1.100 1.089
C01 H013 1.101 1.090
C05 H051 1.100 1.090
C05 H052 1.100 1.090
C09 H09 1.080 1.080
C13 H13 1.080 1.080
C20 H20 1.080 1.080
C15 H15 1.080 1.081
C17 H17 1.080 1.080
C29 H29 1.080 1.080
N35 H351 1.000 0.971
N35 H352 1.000 0.971
C39 H39 1.100 1.090
C41 H411 1.100 1.090
C41 H412 1.100 1.090
C53 H531 1.100 1.090
C53 H532 1.100 1.090
C44 H441 1.100 1.090
C44 H442 1.100 1.091
C50 H501 1.101 1.091
C50 H502 1.100 1.090

Bond Angles for H1B

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 C05 N08 107.8 109.4
C05 C01 H011 109.5 109.5
C05 C01 H012 109.5 109.5
C05 C01 H013 109.5 109.5
C01 C05 H051 109.9 109.5
C01 C05 H052 109.9 109.4
C05 N08 C09 119.8 118.8
C05 N08 C32 117.7 118.9
N08 C05 H051 109.9 109.5
N08 C05 H052 109.9 109.5
C09 N08 C32 122.5 122.3
N08 C09 C11 124.2 121.4
N08 C09 H09 117.9 119.3
N08 C32 C31 116.8 120.2
N08 C32 O33 121.9 119.9
C09 C11 C12 119.4 120.1
C09 C11 C26 115.8 119.7
C11 C09 H09 117.9 119.3
C12 C11 C26 124.8 120.1
C11 C12 C13 120.4 120.1
C11 C12 C20 120.7 120.2
C11 C26 S27 126.4 131.5
C11 C26 C31 122.3 118.8
C13 C12 C20 118.9 119.7
C12 C13 C15 120.5 119.9
C12 C13 H13 119.8 120.1
C12 C20 C19 120.6 119.9
C12 C20 H20 119.7 120.0
C13 C15 C17 120.1 120.1
C15 C13 H13 119.8 120.1
C13 C15 H15 120.0 119.9
C15 C17 C19 120.4 120.2
C17 C15 H15 120.0 119.9
C15 C17 H17 119.8 119.9
C17 C19 C20 119.5 120.1
C17 C19 C22 120.6 119.9
C19 C17 H17 119.8 119.9
C20 C19 C22 120.0 119.9
C19 C20 H20 119.7 120.1
C19 C22 F23 112.6 109.5
C19 C22 F24 112.7 109.5
C19 C22 F25 111.3 109.4
F23 C22 F24 108.4 109.5
F23 C22 F25 107.6 109.5
F24 C22 F25 103.7 109.5
S27 C26 C31 111.3 109.7
C26 S27 C28 91.5 91.5
C26 C31 C29 110.3 112.7
C26 C31 C32 118.3 117.5
S27 C28 C29 111.7 110.5
S27 C28 C34 125.0 124.8
C29 C28 C34 123.2 124.7
C28 C29 C31 115.1 115.6
C28 C29 H29 122.5 122.2
C28 C34 N35 119.1 120.0
C28 C34 N37 115.5 120.0
C29 C31 C32 131.3 129.8
C31 C29 H29 122.4 122.2
C31 C32 O33 121.3 119.9
N35 C34 N37 124.8 120.0
C34 N35 H351 120.0 120.0
C34 N35 H352 120.0 120.0
C34 N37 C39 128.7 120.0
N37 C39 C41 108.8 109.3
N37 C39 C53 110.5 109.3
N37 C39 H39 109.2 109.3
C41 C39 C53 111.7 110.6
C39 C41 C44 111.6 110.0
C41 C39 H39 108.4 109.2
C39 C41 H411 108.9 109.4
C39 C41 H412 109.0 109.4
C39 C53 C50 117.6 110.0
C53 C39 H39 108.2 109.2
C39 C53 H531 107.4 109.4
C39 C53 H532 107.4 109.3
C41 C44 S47 110.5 109.0
C44 C41 H411 108.9 109.4
C44 C41 H412 108.9 109.4
C41 C44 H441 109.2 109.6
C41 C44 H442 109.2 109.5
C44 S47 O48 109.1 108.7
C44 S47 O49 109.2 108.6
C44 S47 C50 101.1 101.3
S47 C44 H441 109.2 109.6
S47 C44 H442 109.2 109.6
O48 S47 O49 117.9 119.3
O48 S47 C50 109.1 108.7
O49 S47 C50 109.1 108.8
S47 C50 C53 111.4 109.0
S47 C50 H501 109.0 109.5
S47 C50 H502 109.0 109.6
C50 C53 H531 107.4 109.4
C50 C53 H532 107.4 109.4
C53 C50 H501 109.0 109.5
C53 C50 H502 109.0 109.6
H011 C01 H012 109.4 109.5
H011 C01 H013 109.5 109.5
H012 C01 H013 109.5 109.4
H051 C05 H052 109.5 109.4
H351 N35 H352 120.0 120.0
H411 C41 H412 109.5 109.3
H531 C53 H532 109.5 109.3
H441 C44 H442 109.5 109.6
H501 C50 H502 109.5 109.6

Torsion Angles for H1B

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C01 C05 N08 C09 262.2 90.0
C01 C05 N08 C32 80.9 269.7
N08 C05 C01 H051 240.3 240.0
N08 C05 C01 H052 119.8 120.0
H011 C01 C05 H012 240.0 239.9
H011 C01 C05 H013 120.0 120.0
H012 C01 C05 H013 240.0 240.0
H051 C05 C01 H052 239.5 240.1
N08 C05 C01 H011 180.0 299.9
N08 C05 C01 H012 300.0 60.0
N08 C05 C01 H013 60.0 180.0
C01 C05 N08 H051 119.7 120.0
C01 C05 N08 H052 240.2 240.0
C09 N08 C05 C32 181.3 180.3
C05 N08 C09 C11 179.2 179.9
C05 N08 C09 H09 359.2 360.0
C05 N08 C32 C31 181.2 179.8
C05 N08 C32 O33 0.8 0.0
H051 C05 N08 H052 120.5 120.0
C05 N08 C09 C32 178.6 179.7
C09 N08 C05 H051 142.5 330.0
C09 N08 C05 H052 22.0 210.0
C09 N08 C32 C31 359.9 359.4
C09 N08 C32 O33 179.4 179.7
N08 C09 C11 C12 179.5 180.0
N08 C09 C11 C26 358.6 0.0
C11 C09 N08 H09 180.0 179.9
C05 N08 C32 C09 181.4 180.3
C32 N08 C05 H051 321.2 149.7
C32 N08 C05 H052 200.7 29.7
C32 N08 C09 C11 0.6 0.3
C32 N08 C09 H09 180.6 180.3
C26 C31 C32 N08 0.5 0.6
C29 C31 C32 N08 178.1 180.2
C31 C32 N08 O33 180.5 179.7
C11 C09 N08 C32 0.6 0.3
N08 C09 C11 H09 180.0 180.1
C12 C11 C09 C26 180.8 180.0
C09 C11 C12 C13 318.9 115.1
C09 C11 C12 C20 138.3 294.7
C09 C11 C26 S27 180.1 180.0
C09 C11 C26 C31 1.7 0.0
C09 C11 C12 C26 179.1 180.0
C12 C11 C09 H09 359.5 359.9
C12 C11 C26 S27 359.2 360.0
C12 C11 C26 C31 180.8 180.0
C13 C12 C11 C20 180.6 180.3
C11 C12 C13 C15 180.1 180.0
C11 C12 C13 H13 0.1 360.0
C11 C12 C20 C19 180.7 179.7
C11 C12 C20 H20 0.7 0.0
C09 C11 C26 C12 180.9 180.0
C26 C11 C09 H09 178.6 180.0
C26 C11 C12 C13 139.8 295.0
C26 C11 C12 C20 319.2 114.7
S27 C26 C11 C31 178.4 180.0
C11 C26 S27 C28 179.6 180.0
C11 C26 C31 C29 180.6 180.0
C11 C26 C31 C32 358.7 359.7
C13 C12 C11 C26 139.8 295.0
C11 C12 C13 C20 179.4 179.7
C13 C12 C20 C19 0.2 359.3
C13 C12 C20 H20 180.2 179.7
C12 C13 C15 C17 359.2 0.0
C15 C13 C12 H13 180.0 180.0
C12 C13 C15 H15 179.2 180.0
C20 C12 C11 C26 319.2 114.7
C11 C12 C20 C13 180.6 180.3
C20 C12 C13 C15 0.7 0.3
C20 C12 C13 H13 180.7 180.3
C17 C19 C20 C12 359.1 0.7
C12 C20 C19 C22 179.0 180.3
C19 C20 C12 H20 180.0 179.6
C15 C13 C12 C20 0.7 0.3
C12 C13 C15 H13 180.0 180.0
C13 C15 C17 C19 360.0 360.0
C17 C15 C13 H15 180.0 180.1
C13 C15 C17 H17 180.0 180.0
C17 C15 C13 H13 179.2 180.1
C13 C15 C17 H15 180.0 179.9
C15 C17 C19 C20 0.9 359.7
C15 C17 C19 C22 180.9 180.0
C19 C17 C15 H17 180.0 179.9
C12 C20 C19 C17 359.1 0.7
C19 C17 C15 H15 180.0 180.0
C15 C17 C19 H17 180.0 180.1
C20 C19 C17 C22 180.0 179.7
C17 C19 C20 H20 179.0 180.3
C17 C19 C22 F23 352.4 360.0
C17 C19 C22 F24 229.4 120.0
C17 C19 C22 F25 113.3 240.0
C12 C20 C19 H20 180.0 180.4
C17 C19 C20 C22 180.0 180.3
C20 C19 C17 H17 180.9 179.6
C20 C19 C22 F23 172.4 180.3
C20 C19 C22 F24 49.4 300.4
C20 C19 C22 F25 293.3 60.4
C17 C19 C22 C20 180.0 179.7
C22 C19 C17 H17 0.9 360.0
C22 C19 C20 H20 359.0 360.0
F23 C22 C19 F24 123.1 240.0
F23 C22 C19 F25 239.1 120.0
F24 C22 C19 F25 116.0 240.0
C19 C22 F23 F24 234.6 120.0
C19 C22 F23 F25 123.0 240.1
F24 C22 F23 F25 248.4 120.0
C19 C22 F24 F23 125.4 240.0
C19 C22 F24 F25 239.5 120.0
F23 C22 F24 F25 114.1 240.0
C19 C22 F25 F23 236.2 120.0
C19 C22 F25 F24 121.5 240.0
F23 C22 F25 F24 245.3 120.0
C11 C26 S27 C31 181.4 180.0
S27 C26 C31 C29 2.0 0.1
S27 C26 C31 C32 180.1 179.7
C26 S27 C28 C29 1.2 360.0
C26 S27 C28 C34 183.9 180.0
N08 C32 C31 C26 0.5 0.6
C11 C26 C31 S27 178.6 180.0
C31 C26 S27 C28 358.1 360.0
C28 C29 C31 C26 358.9 359.9
C29 C31 C26 C32 181.9 180.3
C26 C31 C29 H29 178.9 180.0
C26 C31 C32 O33 180.9 180.3
C28 S27 C26 C31 358.1 360.0
C29 C28 S27 C34 177.3 180.0
S27 C28 C29 C31 359.7 0.0
S27 C28 C29 H29 179.7 180.0
S27 C28 C34 N35 327.5 180.0
S27 C28 C34 N37 138.9 360.0
C26 C31 C29 C28 358.9 359.9
S27 C28 C29 C34 182.7 180.0
C29 C28 C34 N35 150.6 0.0
C29 C28 C34 N37 321.9 180.0
C28 C29 C31 C32 181.1 180.3
C31 C29 C28 H29 180.0 180.1
S27 C28 C34 C29 177.0 180.0
C34 C28 C29 C31 177.0 180.0
C34 C28 C29 H29 357.0 359.9
N35 C34 C28 N37 188.7 180.1
C28 C34 N35 H351 170.5 355.4
C28 C34 N35 H352 350.4 175.4
C28 C34 N37 C39 183.0 186.3
N08 C32 C31 C29 178.1 180.2
C26 C31 C29 C32 177.8 179.6
C31 C29 C28 C34 177.0 180.0
C28 C29 C31 H29 180.0 179.9
C29 C31 C32 O33 358.5 359.9
N08 C32 C31 O33 179.5 180.3
C26 C31 C32 C29 182.4 180.4
C32 C31 C29 H29 1.1 0.4
N08 C32 O33 C31 180.5 179.7
C28 C34 N35 N37 170.5 179.9
N35 C34 N37 C39 353.8 6.2
H351 N35 C34 H352 180.0 180.0
C28 C34 N37 N35 189.2 180.1
N37 C34 N35 H351 360.0 175.5
N37 C34 N35 H352 180.0 355.5
C34 N37 C39 C41 130.4 126.6
C34 N37 C39 C53 253.4 247.7
C34 N37 C39 H39 12.3 7.2
C41 C39 N37 C53 237.1 238.9
N37 C39 C41 C44 182.6 190.3
C41 C39 N37 H39 118.1 119.4
N37 C39 C41 H411 302.9 310.4
N37 C39 C41 H412 62.3 70.1
N37 C39 C53 C50 184.6 169.7
C53 C39 N37 H39 241.1 240.6
N37 C39 C53 H531 305.8 289.9
N37 C39 C53 H532 63.4 49.6
N37 C39 C41 C53 122.2 120.3
N37 C39 C41 H39 241.4 240.5
C41 C39 C53 C50 305.9 290.0
C53 C39 C41 H39 119.1 120.2
C41 C39 C53 H531 67.0 50.2
C41 C39 C53 H532 184.7 169.9
C39 C41 C44 S47 293.7 296.3
C44 C41 C39 H411 239.7 239.8
C44 C41 C39 H412 120.3 120.2
C39 C41 C44 H441 53.8 56.2
C39 C41 C44 H442 173.5 176.4
H411 C41 C39 H412 240.6 240.4
N37 C39 C53 C41 238.7 239.7
N37 C39 C53 H39 119.5 119.5
C53 C39 C41 C44 60.4 70.0
C41 C39 C53 H39 240.8 239.8
C53 C39 C41 H411 180.7 190.1
C53 C39 C41 H412 300.1 309.8
S47 C50 C53 C39 51.7 63.7
C50 C53 C39 H531 238.8 239.8
C50 C53 C39 H532 121.2 120.2
C39 C53 C50 H501 291.5 303.8
C39 C53 C50 H502 172.0 183.5
H531 C53 C39 H532 242.4 240.3
C44 C41 C39 C53 60.4 70.0
C44 C41 C39 H39 301.2 309.8
C39 C41 C44 H411 120.3 120.2
C39 C41 C44 H412 239.7 239.8
C41 C44 S47 O48 303.0 299.9
C41 C44 S47 O49 172.8 168.7
C41 C44 S47 C50 57.8 54.3
S47 C44 C41 H441 239.9 240.1
S47 C44 C41 H442 120.2 119.9
H411 C41 C44 H412 119.4 119.6
H441 C44 C41 H442 240.3 239.8
S47 C44 C41 H411 173.4 176.2
S47 C44 C41 H412 54.0 56.5
C41 C44 S47 H441 120.1 119.9
C41 C44 S47 H442 239.8 240.1
O48 S47 C44 O49 130.2 131.2
O48 S47 C44 C50 245.1 245.6
O49 S47 C44 C50 114.9 114.4
C44 S47 C50 C53 310.6 305.7
C44 S47 C50 H501 70.9 65.5
C44 S47 C50 H502 190.3 185.8
H441 C44 S47 H442 119.7 120.3
C44 S47 O48 O49 234.8 234.8
C44 S47 O48 C50 109.6 109.4
O48 S47 C44 H441 182.8 180.1
O48 S47 C44 H442 63.1 59.8
O49 S47 O48 C50 234.8 234.7
O48 S47 C50 C53 65.5 60.1
O48 S47 C50 H501 185.8 179.9
O48 S47 C50 H502 305.2 300.2
C44 S47 O49 O48 125.2 125.2
C44 S47 O49 C50 250.4 250.5
O49 S47 C44 H441 52.6 48.8
O49 S47 C44 H442 292.9 288.6
O48 S47 O49 C50 125.2 125.3
O49 S47 C50 C53 195.7 191.4
O49 S47 C50 H501 315.9 311.2
O49 S47 C50 H502 75.3 71.5
C39 C53 C50 S47 51.7 63.7
C44 S47 C50 O48 245.1 245.6
C44 S47 C50 O49 115.0 114.3
C50 S47 C44 H441 297.7 294.4
C50 S47 C44 H442 178.0 174.1
O48 S47 C50 O49 229.8 228.7
S47 C50 C53 H531 290.6 303.5
S47 C50 C53 H532 172.9 183.8
C53 C50 S47 H501 239.7 240.2
C53 C50 S47 H502 120.3 119.9
H501 C50 S47 H502 240.6 239.7
C50 C53 C39 H39 65.1 50.2
C39 C53 C50 H531 121.2 120.2
C39 C53 C50 H532 238.8 239.9
S47 C50 C53 H501 120.3 119.8
S47 C50 C53 H502 239.7 240.1
H531 C53 C50 H532 117.7 119.7
H501 C50 C53 H502 119.4 120.3
H011 C01 C05 N08 180.0 299.9
C05 C01 H011 H012 120.0 120.0
C05 C01 H011 H013 240.0 240.0
H011 C01 C05 H051 299.8 60.0
H011 C01 C05 H052 60.3 179.9
H012 C01 H011 H013 120.0 120.0
H012 C01 C05 N08 300.0 60.0
C05 C01 H012 H011 240.0 240.0
C05 C01 H012 H013 120.0 120.0
H012 C01 C05 H051 59.8 180.1
H012 C01 C05 H052 180.2 300.0
H011 C01 H012 H013 240.0 240.0
H013 C01 C05 N08 60.0 180.0
C05 C01 H013 H011 120.0 120.0
C05 C01 H013 H012 240.0 240.0
H013 C01 C05 H051 179.7 300.0
H013 C01 C05 H052 300.2 60.0
H011 C01 H013 H012 120.0 120.0
C01 C05 H051 N08 241.6 240.0
H051 C05 C01 H011 299.8 60.0
H051 C05 C01 H012 59.8 180.1
H051 C05 C01 H013 179.7 300.0
C01 C05 H051 H052 120.8 119.9
H051 C05 N08 C09 142.5 330.0
H051 C05 N08 C32 321.2 149.7
N08 C05 H051 H052 239.2 239.9
C01 C05 H052 N08 118.5 120.0
H052 C05 C01 H011 60.3 179.9
H052 C05 C01 H012 180.2 300.0
H052 C05 C01 H013 300.2 60.0
C01 C05 H052 H051 239.3 240.1
H052 C05 N08 C09 22.0 210.0
H052 C05 N08 C32 200.7 29.7
N08 C05 H052 H051 120.8 120.1
H09 C09 N08 C32 180.6 180.3
N08 C09 H09 C11 180.0 179.9
H09 C09 C11 C12 359.5 359.9
H09 C09 C11 C26 178.6 180.0
H13 C13 C12 C20 180.7 180.3
C12 C13 H13 C15 180.0 180.0
H13 C13 C15 C17 179.2 180.1
H13 C13 C15 H15 359.2 360.0
C12 C20 H20 C19 180.0 179.6
H20 C20 C19 C22 359.0 360.0
C13 C15 H15 C17 180.0 180.1
H15 C15 C13 H13 359.2 360.0
H15 C15 C17 C19 180.0 180.0
H15 C15 C17 H17 0.0 0.1
C15 C17 H17 C19 180.0 179.9
H17 C17 C15 H15 0.0 0.1
H17 C17 C19 C20 180.9 179.6
H17 C17 C19 C22 0.9 360.0
H29 C29 C28 C34 357.0 359.9
C28 C29 H29 C31 180.0 180.1
H29 C29 C31 C32 1.1 0.4
H351 N35 C34 N37 360.0 175.5
C34 N35 H351 H352 180.0 180.0
H352 N35 C34 N37 180.0 355.5
C34 N35 H352 H351 180.0 180.0
N37 C39 H39 C41 118.4 119.5
N37 C39 H39 C53 239.7 240.5
C41 C39 H39 C53 121.3 121.0
H39 C39 C41 C44 301.2 309.8
H39 C39 C41 H411 61.6 69.9
H39 C39 C41 H412 180.9 189.6
H39 C39 C53 C50 65.1 50.2
H39 C39 C53 H531 186.3 170.4
H39 C39 C53 H532 303.9 290.1
H411 C41 C39 C53 180.7 190.1
C39 C41 H411 C44 238.1 239.4
H411 C41 C39 H39 61.6 69.9
C39 C41 H411 H412 119.0 119.7
H411 C41 C44 S47 173.4 176.2
C44 C41 H411 H412 241.0 240.3
H411 C41 C44 H441 293.5 296.0
H411 C41 C44 H442 53.2 56.3
H412 C41 C39 C53 300.1 309.8
C39 C41 H412 C44 121.9 120.6
H412 C41 C39 H39 180.9 189.6
C39 C41 H412 H411 241.0 240.3
H412 C41 C44 S47 54.0 56.5
C44 C41 H412 H411 119.0 119.7
H412 C41 C44 H441 174.1 176.4
H412 C41 C44 H442 293.8 296.6
C39 C53 H531 C50 232.6 239.4
H531 C53 C39 H39 186.3 170.4
C39 C53 H531 H532 116.3 119.7
C50 C53 H531 H532 243.7 240.3
H531 C53 C50 H501 170.3 183.7
H531 C53 C50 H502 50.9 63.4
C39 C53 H532 C50 127.4 120.5
H532 C53 C39 H39 303.9 290.1
C39 C53 H532 H531 243.7 240.3
C50 C53 H532 H531 116.3 119.7
H532 C53 C50 H501 52.6 64.0
H532 C53 C50 H502 293.2 303.6
C41 C44 H441 S47 239.0 240.5
H441 C44 C41 H411 293.5 296.0
H441 C44 C41 H412 174.1 176.4
C41 C44 H441 H442 119.5 120.2
H441 C44 S47 O48 182.8 180.1
H441 C44 S47 O49 52.6 48.8
H441 C44 S47 C50 297.7 294.4
S47 C44 H441 H442 240.5 239.7
C41 C44 H442 S47 121.0 119.5
H442 C44 C41 H411 53.2 56.3
H442 C44 C41 H412 293.8 296.6
C41 C44 H442 H441 240.5 239.8
H442 C44 S47 O48 63.1 59.8
H442 C44 S47 O49 292.9 288.6
H442 C44 S47 C50 178.0 174.1
S47 C44 H442 H441 119.5 120.3
S47 C50 H501 C53 238.2 240.5
S47 C50 H501 H502 119.1 120.3
H501 C50 C53 H531 170.3 183.7
H501 C50 C53 H532 52.6 64.0
C53 C50 H501 H502 240.9 239.7
S47 C50 H502 C53 121.8 119.5
S47 C50 H502 H501 240.9 239.8
H502 C50 C53 H531 50.9 63.4
H502 C50 C53 H532 293.2 303.6
C53 C50 H502 H501 119.1 120.2