PDB Chemical Component H18

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for H18

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CA CB 1.554 1.529
CA CF 1.606 1.530
CA S4 1.840 1.814
CA HA 1.115 1.090
CB CC 1.534 1.530
CB HB1 1.115 1.090
CB HB2 1.115 1.090
CC CD 1.540 1.530
CC HC1 1.115 1.090
CC HC2 1.115 1.090
CD CE 1.571 1.530
CD HD1 1.115 1.090
CD HD2 1.115 1.090
CE CF 1.587 1.531
CE HE1 1.115 1.090
CE HE2 1.115 1.090
CF HF1 1.115 1.090
CF HF2 1.115 1.091
N1 C6 1.450 1.345
N1 C2 1.420 1.379
N1 HN1 1.020 0.970
C6 O2 1.296 1.219
C6 C5 1.533 1.411
C5 C4 1.437 1.357
C5 C11 1.543 1.507
C4 S4 1.775 1.762
C4 C3 1.427 1.464
S4 OS 1.506 1.421
C2 C3 1.479 1.408
C2 C10 1.418 1.391
C3 C7 1.456 1.398
C7 C8 1.424 1.378
C7 H7 1.103 1.080
C8 C9 1.425 1.389
C8 CL 1.683 1.736
C9 C10 1.424 1.379
C9 H9 1.103 1.080
C10 H10 1.103 1.080
C11 C12 1.533 1.530
C11 H111 1.115 1.089
C11 H112 1.115 1.090
C12 C13 1.547 1.530
C12 H121 1.115 1.090
C12 H122 1.115 1.090
C13 H131 1.115 1.090
C13 H132 1.115 1.090
C13 H133 1.115 1.090

Bond Angles for H18

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CB CA CF 113.8 109.5
CB CA S4 111.0 109.5
CB CA HA 105.6 109.5
CA CB CC 108.8 109.5
CA CB HB1 112.5 109.5
CA CB HB2 112.5 109.5
CF CA S4 110.1 109.5
CF CA HA 106.6 109.5
CA CF CE 117.3 109.5
CA CF HF1 109.4 109.5
CA CF HF2 109.4 109.4
S4 CA HA 109.6 109.4
CA S4 C4 106.8 103.0
CA S4 OS 110.4 109.5
CC CB HB1 112.5 109.5
CC CB HB2 112.5 109.5
CB CC CD 107.6 109.4
CB CC HC1 112.9 109.5
CB CC HC2 112.9 109.4
HB1 CB HB2 98.0 109.4
CD CC HC1 112.9 109.5
CD CC HC2 112.9 109.5
CC CD CE 114.4 109.5
CC CD HD1 110.4 109.5
CC CD HD2 110.4 109.4
HC1 CC HC2 97.6 109.5
CE CD HD1 110.4 109.5
CE CD HD2 110.4 109.4
CD CE CF 116.9 109.5
CD CE HE1 109.5 109.5
CD CE HE2 109.5 109.5
HD1 CD HD2 99.9 109.5
CF CE HE1 109.5 109.5
CF CE HE2 109.5 109.4
CE CF HF1 109.4 109.5
CE CF HF2 109.4 109.4
HE1 CE HE2 100.6 109.5
HF1 CF HF2 100.8 109.5
C6 N1 C2 122.8 120.9
C6 N1 HN1 119.7 119.5
N1 C6 O2 119.9 119.1
N1 C6 C5 116.7 121.7
C2 N1 HN1 117.5 119.6
N1 C2 C3 120.1 119.6
N1 C2 C10 119.4 120.9
O2 C6 C5 123.4 119.2
C6 C5 C4 119.2 120.2
C6 C5 C11 120.0 119.9
C4 C5 C11 120.8 119.9
C5 C4 S4 118.5 120.7
C5 C4 C3 122.1 118.6
C5 C11 C12 107.9 109.5
C5 C11 H111 112.8 109.5
C5 C11 H112 112.8 109.4
S4 C4 C3 119.4 120.7
C4 S4 OS 110.3 103.0
C4 C3 C2 119.2 119.0
C4 C3 C7 122.5 121.1
C3 C2 C10 120.5 119.5
C2 C3 C7 118.3 119.9
C2 C10 C9 119.6 119.9
C2 C10 H10 120.0 120.1
C3 C7 C8 119.7 119.6
C3 C7 H7 121.2 120.2
C8 C7 H7 119.1 120.2
C7 C8 C9 120.7 120.4
C7 C8 CL 120.9 119.8
C9 C8 CL 118.4 119.8
C8 C9 C10 121.3 120.7
C8 C9 H9 119.4 119.7
C10 C9 H9 119.3 119.7
C9 C10 H10 120.4 120.0
C12 C11 H111 112.8 109.5
C12 C11 H112 112.8 109.5
C11 C12 C13 114.4 109.5
C11 C12 H121 110.4 109.5
C11 C12 H122 110.4 109.4
H111 C11 H112 97.7 109.5
C13 C12 H121 110.4 109.5
C13 C12 H122 110.4 109.5
C12 C13 H131 110.4 109.5
C12 C13 H132 114.4 109.5
C12 C13 H133 110.4 109.5
H121 C12 H122 99.9 109.5
H131 C13 H132 110.4 109.5
H131 C13 H133 99.9 109.4
H132 C13 H133 110.4 109.5

Torsion Angles for H18

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CF CA CB S4 124.7 120.0
CF CA CB HA 243.5 240.0
CB CA CF CE 21.5 60.0
CB CA CF HF1 256.2 180.0
CB CA CF HF2 146.7 300.0
S4 CA CB HA 118.7 120.0
CB CA S4 C4 264.6 185.1
CB CA S4 OS 144.6 76.1
CC CB CA HB1 125.3 239.9
CC CB CA HB2 234.7 120.0
CA CB CC CD 72.2 60.0
CA CB CC HC1 307.0 180.0
CA CB CC HC2 197.5 300.0
HB1 CB CA HB2 109.5 240.1
CB CA CF S4 234.8 240.0
CB CA CF HA 116.0 120.0
CF CA CB CC 306.7 300.0
CF CA CB HB1 181.4 60.1
CF CA CB HB2 72.0 180.0
S4 CA CF HA 241.2 240.0
CF CA S4 C4 137.8 65.1
CF CA S4 OS 17.8 316.0
CD CE CF CA 352.0 300.0
CA CF CE HE1 117.2 180.1
CA CF CE HE2 226.7 60.0
CE CF CA HF1 125.2 239.9
CE CF CA HF2 234.8 120.0
HF1 CF CA HF2 109.5 240.0
CB CA S4 CF 126.8 120.1
CB CA S4 HA 243.7 240.0
S4 CA CB CC 182.0 180.0
S4 CA CB HB1 56.7 300.0
S4 CA CB HB2 307.2 60.0
CF CA S4 HA 116.9 120.0
S4 CA CF CE 146.7 180.0
S4 CA CF HF1 21.4 300.0
S4 CA CF HF2 271.9 60.0
C5 C4 S4 CA 98.4 104.1
CA S4 C4 C3 278.2 284.1
C4 S4 CA OS 120.0 109.0
CB CA HA CF 238.7 240.0
CB CA HA S4 119.6 120.0
HA CA CB CC 63.2 60.0
HA CA CB HB1 298.0 180.1
HA CA CB HB2 188.5 300.0
CF CA HA S4 240.9 240.0
HA CA CF CE 265.5 299.9
HA CA CF HF1 140.3 60.0
HA CA CF HF2 30.7 180.0
HA CA S4 C4 20.9 305.1
HA CA S4 OS 260.9 196.1
CC CB CA CF 306.7 300.0
CC CB CA S4 182.0 180.0
CC CB CA HA 63.2 60.0
CA CB CC HB1 234.7 120.0
CA CB CC HB2 125.3 240.0
HB1 CB CC HB2 250.6 120.0
CD CC CB HC1 125.2 240.0
CD CC CB HC2 234.7 120.0
CB CC CD CE 301.4 300.0
CB CC CD HD1 176.2 60.0
CB CC CD HD2 66.7 180.0
HC1 CC CB HC2 109.5 240.0
HB1 CB CA CF 181.4 60.1
HB1 CB CA S4 56.7 300.0
HB1 CB CA HA 298.0 180.1
CA CB HB1 CC 123.2 240.0
CA CB HB1 HB2 241.6 120.0
CC CB HB1 HB2 118.4 240.0
HB1 CB CC CD 197.5 300.0
HB1 CB CC HC1 72.3 60.0
HB1 CB CC HC2 322.8 180.0
HB2 CB CA CF 72.0 180.0
HB2 CB CA S4 307.2 60.0
HB2 CB CA HA 188.5 300.0
CA CB HB2 CC 236.8 120.0
CA CB HB2 HB1 118.4 240.0
CC CB HB2 HB1 241.6 120.0
HB2 CB CC CD 306.9 180.0
HB2 CB CC HC1 181.7 300.0
HB2 CB CC HC2 72.2 60.0
CD CC CB HB1 197.5 300.0
CD CC CB HB2 306.9 180.0
CB CC CD HC1 234.7 120.0
CB CC CD HC2 125.3 240.1
HC1 CC CD HC2 250.5 120.1
CE CD CC HD1 125.2 239.9
CE CD CC HD2 234.7 119.9
CC CD CE CF 26.7 60.0
CC CD CE HE1 261.5 180.0
CC CD CE HE2 152.0 300.1
HD1 CD CC HD2 109.5 240.0
HC1 CC CB HB1 72.3 60.0
HC1 CC CB HB2 181.7 300.0
CB CC HC1 CD 122.3 240.0
CB CC HC1 HC2 241.1 120.0
CD CC HC1 HC2 118.8 240.0
HC1 CC CD CE 66.7 180.0
HC1 CC CD HD1 301.4 300.0
HC1 CC CD HD2 191.9 60.0
HC2 CC CB HB1 322.8 180.0
HC2 CC CB HB2 72.2 60.0
CB CC HC2 CD 237.7 119.9
CB CC HC2 HC1 118.9 240.0
CD CC HC2 HC1 241.2 120.0
HC2 CC CD CE 176.1 59.9
HC2 CC CD HD1 50.9 180.0
HC2 CC CD HD2 301.4 300.0
CA CF CE CD 352.0 300.0
CE CD CC HC1 66.7 180.0
CE CD CC HC2 176.1 59.9
CC CD CE HD1 234.8 120.1
CC CD CE HD2 125.3 240.1
HD1 CD CE HD2 250.5 120.0
CF CE CD HE1 125.3 240.0
CF CE CD HE2 234.7 119.9
CD CE CF HF1 117.2 180.0
CD CE CF HF2 226.7 60.0
HE1 CE CD HE2 109.5 239.9
HD1 CD CC HC1 301.4 300.0
HD1 CD CC HC2 50.9 180.0
CC CD HD1 CE 127.5 239.9
CC CD HD1 HD2 243.7 120.0
CE CD HD1 HD2 116.2 240.0
HD1 CD CE CF 152.0 299.9
HD1 CD CE HE1 26.7 59.9
HD1 CD CE HE2 277.3 180.0
HD2 CD CC HC1 191.9 60.0
HD2 CD CC HC2 301.4 300.0
CC CD HD2 CE 232.5 120.0
CC CD HD2 HD1 116.3 240.0
CE CD HD2 HD1 243.8 120.0
HD2 CD CE CF 261.4 180.0
HD2 CD CE HE1 136.2 299.9
HD2 CD CE HE2 26.7 60.0
CE CF CA S4 146.7 180.0
CE CF CA HA 265.5 299.9
CA CF CE HF1 234.7 120.1
CA CF CE HF2 125.2 240.1
CF CE CD HD1 152.0 299.9
CF CE CD HD2 261.4 180.0
CD CE CF HE1 234.7 120.0
CD CE CF HE2 125.3 240.0
HE1 CE CF HE2 250.5 120.0
HF1 CF CE HF2 250.5 120.0
HE1 CE CD HD1 26.7 59.9
HE1 CE CD HD2 136.2 299.9
CD CE HE1 CF 129.4 240.0
CD CE HE1 HE2 244.7 120.1
CF CE HE1 HE2 115.3 240.0
HE1 CE CF HF1 242.5 60.0
HE1 CE CF HF2 352.0 300.0
HE2 CE CD HD1 277.3 180.0
HE2 CE CD HD2 26.7 60.0
CD CE HE2 CF 230.6 120.0
CD CE HE2 HE1 115.3 240.0
CF CE HE2 HE1 244.7 120.0
HE2 CE CF HF1 351.9 300.0
HE2 CE CF HF2 101.4 180.0
HF1 CF CA S4 21.4 300.0
HF1 CF CA HA 140.3 60.0
CA CF HF1 CE 129.7 240.0
CA CF HF1 HF2 244.8 120.0
HF1 CF CE HE1 242.5 60.0
HF1 CF CE HE2 351.9 300.0
CE CF HF1 HF2 115.1 240.0
HF2 CF CA S4 271.9 60.0
HF2 CF CA HA 30.7 180.0
CA CF HF2 CE 230.3 120.0
CA CF HF2 HF1 115.2 240.0
HF2 CF CE HE1 352.0 300.0
HF2 CF CE HE2 101.4 180.0
CE CF HF2 HF1 244.9 120.0
C2 N1 C6 HN1 180.0 180.2
C6 N1 C2 C3 360.0 0.1
C6 N1 C2 C10 180.2 180.1
O2 C6 N1 C5 179.9 180.1
N1 C6 C5 C4 359.8 0.1
N1 C6 C5 C11 179.9 180.1
C6 N1 C2 HN1 180.0 179.8
C2 N1 C6 O2 180.0 180.0
C2 N1 C6 C5 0.1 359.9
C4 C3 C2 N1 0.0 360.0
C3 C2 N1 C10 179.8 180.0
N1 C2 C3 C7 179.9 180.0
N1 C2 C10 C9 179.9 180.0
N1 C2 C10 H10 359.9 359.9
C6 N1 HN1 C2 180.0 180.2
HN1 N1 C6 O2 360.0 359.8
HN1 N1 C6 C5 180.1 179.7
HN1 N1 C2 C3 180.0 180.2
HN1 N1 C2 C10 0.2 0.3
O2 C6 N1 C2 180.0 180.0
O2 C6 N1 HN1 360.0 359.8
N1 C6 O2 C5 180.1 179.9
O2 C6 C5 C4 179.9 180.0
O2 C6 C5 C11 0.0 360.0
C5 C6 N1 C2 0.1 359.9
C5 C6 N1 HN1 180.1 179.7
N1 C6 C5 O2 179.9 180.1
C4 C5 C6 C11 179.9 180.0
C6 C5 C4 S4 180.0 180.0
C6 C5 C4 C3 0.2 360.0
C6 C5 C11 C12 277.1 275.0
C6 C5 C11 H111 151.8 35.0
C6 C5 C11 H112 42.3 155.0
CA S4 C4 C5 98.4 104.1
C6 C5 C4 C11 180.1 180.0
C4 C5 C11 C12 97.2 94.9
C4 C5 C11 H111 331.9 215.0
C4 C5 C11 H112 222.4 335.0
S4 C4 C5 C3 179.8 180.0
C5 C4 S4 OS 218.4 218.0
C5 C4 C3 C2 359.8 0.0
C5 C4 C3 C7 180.0 180.0
C6 C5 C11 C4 179.9 180.0
C11 C5 C4 S4 359.9 0.0
C11 C5 C4 C3 180.1 180.0
C12 C11 C5 H111 125.2 239.9
C12 C11 C5 H112 234.7 119.9
C5 C11 C12 C13 268.1 180.0
C5 C11 C12 H121 142.8 300.0
C5 C11 C12 H122 33.4 60.0
H111 C11 C5 H112 109.5 240.0
C4 S4 CA HA 20.9 305.1
CA S4 C4 OS 239.9 246.1
S4 C4 C5 C11 359.9 0.0
C5 C4 S4 C3 180.2 180.0
S4 C4 C3 C2 180.0 180.0
S4 C4 C3 C7 0.2 360.0
N1 C2 C3 C4 0.0 360.0
C3 C4 C5 C11 180.1 180.0
C5 C4 C3 S4 179.8 180.0
C3 C4 S4 OS 38.3 38.0
C4 C3 C2 C10 179.8 180.0
C2 C3 C4 C7 179.9 180.0
C4 C3 C7 C8 180.2 180.0
C4 C3 C7 H7 0.2 360.0
OS S4 CA HA 260.9 196.1
CA S4 OS C4 117.9 109.1
OS S4 C4 C3 38.3 38.0
C3 C2 N1 HN1 180.0 180.2
N1 C2 C3 C10 180.2 180.0
C4 C3 C2 C7 180.1 180.0
C3 C2 C10 C9 0.1 0.0
C3 C2 C10 H10 180.1 179.9
C2 C3 C7 C8 0.3 360.0
C2 C3 C7 H7 180.4 180.0
C10 C2 N1 HN1 0.2 0.3
N1 C2 C10 C3 179.8 180.0
C10 C2 C3 C7 359.7 360.0
C8 C9 C10 C2 360.0 360.0
C2 C10 C9 H9 180.0 180.0
C9 C10 C2 H10 180.0 180.1
C4 C3 C7 C2 179.9 180.0
C7 C3 C2 C10 359.7 360.0
C8 C7 C3 H7 180.0 180.0
C3 C7 C8 C9 359.8 0.1
C3 C7 C8 CL 179.8 180.0
C3 C7 C8 H7 180.0 180.0
C9 C8 C7 CL 180.0 180.1
C7 C8 C9 C10 0.1 360.0
C7 C8 C9 H9 180.1 180.0
C3 C7 H7 C8 180.0 180.0
H7 C7 C8 C9 179.7 180.1
H7 C7 C8 CL 359.8 0.0
C2 C10 C9 C8 360.0 360.0
C9 C8 C7 H7 179.7 180.1
C7 C8 C9 CL 180.0 179.9
C10 C9 C8 H9 180.0 180.0
C8 C9 C10 H10 180.0 180.1
CL C8 C7 H7 359.8 0.0
C7 C8 CL C9 180.0 180.1
CL C8 C9 C10 180.0 180.0
CL C8 C9 H9 0.0 0.0
C2 C10 C9 H10 180.0 179.9
C10 C9 C8 CL 180.0 180.0
C8 C9 C10 H9 180.0 180.0
H9 C9 C8 CL 0.0 0.0
C8 C9 H9 C10 180.0 180.0
H9 C9 C10 H10 360.0 0.1
C2 C10 H10 C9 180.0 180.1
H10 C10 C9 H9 360.0 0.1
C5 C11 C12 H111 234.7 120.0
C5 C11 C12 H112 125.3 240.1
H111 C11 C12 H112 250.5 120.0
C13 C12 C11 H121 125.3 240.0
C13 C12 C11 H122 234.7 120.0
C11 C12 C13 H131 54.7 180.0
C11 C12 C13 H132 180.0 300.0
C11 C12 C13 H133 305.3 60.0
H121 C12 C11 H122 109.4 240.0
C5 C11 H111 C12 122.5 240.0
C5 C11 H111 H112 241.2 120.0
C12 C11 H111 H112 118.7 240.0
H111 C11 C12 C13 33.3 60.0
H111 C11 C12 H121 268.1 180.0
H111 C11 C12 H122 158.6 300.0
C5 C11 H112 C12 237.5 120.0
C5 C11 H112 H111 118.8 240.0
C12 C11 H112 H111 241.3 120.1
H112 C11 C12 C13 142.8 299.9
H112 C11 C12 H121 17.5 60.0
H112 C11 C12 H122 268.1 180.0
C13 C12 C11 H111 33.3 60.0
C13 C12 C11 H112 142.8 299.9
C11 C12 C13 H121 234.7 120.0
C11 C12 C13 H122 125.3 240.0
H121 C12 C13 H122 250.5 120.0
H131 C13 C12 H132 234.7 240.0
H131 C13 C12 H133 109.5 120.0
H132 C13 C12 H133 234.8 240.0
H121 C12 C11 H111 268.1 180.0
H121 C12 C11 H112 17.5 60.0
C11 C12 H121 C13 127.5 240.0
C11 C12 H121 H122 243.8 120.0
C13 C12 H121 H122 116.3 240.0
H121 C12 C13 H131 180.0 60.0
H121 C12 C13 H132 305.3 180.0
H121 C12 C13 H133 70.5 300.0
H122 C12 C11 H111 158.6 300.0
H122 C12 C11 H112 268.1 180.0
C11 C12 H122 C13 232.5 120.0
C11 C12 H122 H121 116.2 240.0
C13 C12 H122 H121 243.7 120.0
H122 C12 C13 H131 289.5 300.0
H122 C12 C13 H132 54.8 60.0
H122 C12 C13 H133 180.0 180.0
H131 C13 C12 H121 180.0 60.0
H131 C13 C12 H122 289.5 300.0
C12 C13 H131 H132 127.5 120.0
C12 C13 H131 H133 243.7 240.0
H132 C13 H131 H133 116.2 120.0
H132 C13 C12 H121 305.3 180.0
H132 C13 C12 H122 54.8 60.0
C12 C13 H132 H131 234.7 239.9
C12 C13 H132 H133 125.3 120.0
H131 C13 H132 H133 250.5 240.1
H133 C13 C12 H121 70.5 300.0
H133 C13 C12 H122 180.0 180.0
C12 C13 H133 H131 116.3 120.0
C12 C13 H133 H132 232.5 240.0
H131 C13 H133 H132 116.2 120.0