PDB Chemical Component GYN

Ideal Model

Chemical Description

Name GYMNODIMINE A
Formula C32 H47 N O4
Formal charge 0
Molecular weight 509.720 g/mol
Component type non-polymer

Chemical features

Atom count 84
Chiral atom count 8
Chiral atoms C2 C4 C12 C27 C17 C43 C48 C37
Bond count 88
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (3S,5S)-5-[(4aR,8aS,9E,11S,14S,16R,17R,18E)-11-hydroxy-8,10,16,18-tetramethyl-3,4,5,6,8a,11,12,13,14,15,16,17,20,21-tetradecahydro-2H-14,17-epoxybenzo[2,3]cyclohexadeca[1,2-b]pyridin-7-yl]-3-methyldihydrofuran-2(3H)-one

Chemical Descriptors

Stereo SMILES (CACTVS) C[C@@H]1C[C@@H]2CC[C@H](O)C(=C/[C@H]3C(=C(CC[C@@]34CCCN=C4CC/C=C(C)/[C@@H]1O2)[C@@H]5C[C@H](C)C(=O)O5)C)/C
SMILES (CACTVS) C[CH]1C[CH]2CC[CH](O)C(=C[CH]3C(=C(CC[C]34CCCN=C4CCC=C(C)[CH]1O2)[CH]5C[CH](C)C(=O)O5)C)C
Stereo SMILES (OpenEye) C[C@@H]1C[C@@H]2CC[C@@H](/C(=C/[C@H]3C(=C(CC[C@@]34CCCN=C4CC\C=C(\[C@@H]1O2)/C)[C@@H]5C[C@@H](C(=O)O5)C)C)/C)O
InChI descriptor InChI=1S/C32H47NO4/c1-19-8-6-9-29-32(13-7-15-33-29)14-12-25(28-18-22(4)31(35)37-28)23(5)26(32)17-20(2)27(34)11-10-24-16-21(3)30(19)36-24/h8,17,21-22,24,26-28,30,34H,6-7,9-16,18H2,1-5H3/b19-8+,20-17+/t21-,22+,24+,26+,27+,28+,30+,32+/m1/s1
InChIKey descriptor LFQBHRXYGKMZFS-XGHAUHBHSA-N

Status Information

Last modified 2011-06-04
Created 2009-12-04
Release status REL
Model PDB code 2X00
Processing site EBI