PDB Chemical Component GXN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GXN
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
BR1 |
C13 |
1.411 |
1.891 |
C13 |
C12 |
1.435 |
1.383 |
C13 |
C14 |
1.447 |
1.386 |
C17 |
O02 |
1.421 |
1.429 |
O02 |
C14 |
1.314 |
1.360 |
C12 |
C11 |
1.358 |
1.382 |
C14 |
C15 |
1.435 |
1.391 |
C11 |
C10 |
1.495 |
1.507 |
C11 |
C16 |
1.438 |
1.383 |
C15 |
C16 |
1.391 |
1.386 |
C15 |
O01 |
1.389 |
1.360 |
C10 |
N01 |
1.481 |
1.469 |
C18 |
O01 |
1.407 |
1.428 |
N01 |
C08 |
1.479 |
1.471 |
N01 |
C09 |
1.482 |
1.466 |
C08 |
C07 |
1.530 |
1.529 |
C09 |
C05 |
1.514 |
1.506 |
C07 |
C04 |
1.501 |
1.508 |
C05 |
C04 |
1.400 |
1.379 |
C05 |
C06 |
1.399 |
1.388 |
C04 |
C03 |
1.399 |
1.387 |
C06 |
C01 |
1.399 |
1.383 |
C03 |
C02 |
1.392 |
1.384 |
C01 |
C02 |
1.398 |
1.392 |
C01 |
O03 |
1.386 |
1.361 |
C19 |
O03 |
1.424 |
1.429 |
C02 |
O04 |
1.386 |
1.360 |
O04 |
S01 |
1.637 |
1.522 |
O06 |
S01 |
1.466 |
1.421 |
S01 |
N02 |
1.691 |
1.656 |
S01 |
O05 |
1.459 |
1.421 |
C10 |
H09 |
1.100 |
1.090 |
C10 |
H10 |
1.100 |
1.090 |
C17 |
H13 |
1.099 |
1.090 |
C17 |
H15 |
1.100 |
1.090 |
C17 |
H14 |
1.100 |
1.091 |
C03 |
H01 |
1.080 |
1.080 |
C06 |
H02 |
1.080 |
1.080 |
C07 |
H04 |
1.099 |
1.091 |
C07 |
H03 |
1.100 |
1.089 |
C08 |
H06 |
1.100 |
1.090 |
C08 |
H05 |
1.100 |
1.091 |
C09 |
H08 |
1.100 |
1.090 |
C09 |
H07 |
1.100 |
1.090 |
C12 |
H11 |
1.079 |
1.081 |
C16 |
H12 |
1.080 |
1.080 |
C18 |
H17 |
1.100 |
1.090 |
C18 |
H16 |
1.100 |
1.090 |
C18 |
H18 |
1.100 |
1.091 |
C19 |
H21 |
1.100 |
1.089 |
C19 |
H20 |
1.100 |
1.089 |
C19 |
H19 |
1.100 |
1.091 |
N02 |
H22 |
1.000 |
0.970 |
N02 |
H23 |
1.000 |
0.970 |
Bond Angles for GXN
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
BR1 |
C13 |
C12 |
120.3 |
120.0 |
BR1 |
C13 |
C14 |
119.1 |
120.0 |
C12 |
C13 |
C14 |
120.6 |
120.0 |
C13 |
C12 |
C11 |
118.8 |
120.2 |
C13 |
C12 |
H11 |
120.6 |
119.9 |
C13 |
C14 |
C15 |
119.1 |
119.8 |
C17 |
O02 |
C14 |
124.9 |
117.0 |
O02 |
C17 |
H13 |
109.5 |
109.5 |
O02 |
C17 |
H15 |
109.5 |
109.5 |
O02 |
C17 |
H14 |
109.5 |
109.4 |
C12 |
C11 |
C16 |
121.5 |
120.1 |
C14 |
C15 |
C16 |
118.4 |
119.9 |
C14 |
C15 |
O01 |
118.8 |
120.1 |
C11 |
C10 |
N01 |
112.9 |
109.5 |
C11 |
C10 |
H09 |
108.6 |
109.4 |
C11 |
C10 |
H10 |
108.6 |
109.5 |
C15 |
C16 |
C11 |
121.6 |
120.0 |
C11 |
C16 |
H12 |
119.2 |
120.0 |
C16 |
C15 |
O01 |
122.8 |
120.0 |
C15 |
C16 |
H12 |
119.2 |
120.1 |
C15 |
O01 |
C18 |
119.2 |
117.0 |
C10 |
N01 |
C08 |
109.8 |
111.0 |
C10 |
N01 |
C09 |
112.8 |
111.0 |
N01 |
C10 |
H09 |
108.6 |
109.5 |
N01 |
C10 |
H10 |
108.6 |
109.5 |
O01 |
C18 |
H17 |
109.5 |
109.5 |
O01 |
C18 |
H16 |
109.4 |
109.6 |
O01 |
C18 |
H18 |
109.5 |
109.5 |
N01 |
C08 |
H06 |
109.8 |
109.7 |
N01 |
C08 |
H05 |
109.8 |
109.8 |
N01 |
C09 |
H08 |
109.1 |
109.2 |
N01 |
C09 |
H07 |
109.1 |
109.3 |
C08 |
C07 |
H04 |
109.1 |
109.4 |
C08 |
C07 |
H03 |
109.1 |
109.4 |
C05 |
C06 |
H02 |
119.7 |
119.8 |
C04 |
C03 |
H01 |
119.9 |
119.8 |
C06 |
C01 |
O03 |
118.8 |
120.1 |
C03 |
C02 |
O04 |
121.2 |
120.2 |
C02 |
C01 |
O03 |
121.2 |
120.1 |
C01 |
C02 |
O04 |
119.0 |
120.2 |
C01 |
O03 |
C19 |
120.4 |
117.0 |
O03 |
C19 |
H21 |
109.5 |
109.5 |
O03 |
C19 |
H20 |
109.5 |
109.5 |
O03 |
C19 |
H19 |
109.5 |
109.4 |
C02 |
O04 |
S01 |
121.0 |
114.0 |
O04 |
S01 |
O06 |
109.2 |
106.4 |
O04 |
S01 |
O05 |
107.1 |
106.4 |
S01 |
N02 |
H22 |
109.5 |
120.0 |
S01 |
N02 |
H23 |
109.5 |
120.0 |
H09 |
C10 |
H10 |
109.4 |
109.5 |
H13 |
C17 |
H15 |
109.4 |
109.5 |
H13 |
C17 |
H14 |
109.4 |
109.5 |
H15 |
C17 |
H14 |
109.5 |
109.5 |
H04 |
C07 |
H03 |
109.5 |
109.4 |
H06 |
C08 |
H05 |
109.5 |
109.6 |
H08 |
C09 |
H07 |
109.5 |
109.2 |
H17 |
C18 |
H16 |
109.5 |
109.4 |
H17 |
C18 |
H18 |
109.5 |
109.4 |
H16 |
C18 |
H18 |
109.5 |
109.5 |
H21 |
C19 |
H20 |
109.5 |
109.5 |
H21 |
C19 |
H19 |
109.5 |
109.4 |
H20 |
C19 |
H19 |
109.5 |
109.5 |
H22 |
N02 |
H23 |
109.4 |
120.0 |
Torsion Angles for GXN
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C12 |
C13 |
BR1 |
C14 |
180.2 |
180.3 |
BR1 |
C13 |
C12 |
C11 |
180.0 |
179.7 |
BR1 |
C13 |
C12 |
H11 |
359.9 |
359.7 |
BR1 |
C13 |
C14 |
C15 |
179.9 |
180.3 |
BR1 |
C13 |
C12 |
C14 |
179.8 |
179.7 |
C12 |
C13 |
C14 |
C15 |
359.7 |
0.0 |
C13 |
C12 |
C11 |
C16 |
360.0 |
360.0 |
BR1 |
C13 |
C14 |
C12 |
180.2 |
180.3 |
C14 |
C13 |
C12 |
C11 |
0.2 |
360.0 |
C14 |
C13 |
C12 |
H11 |
180.2 |
180.0 |
C17 |
O02 |
C14 |
C13 |
83.3 |
90.0 |
C13 |
C14 |
C15 |
C16 |
0.3 |
360.0 |
C13 |
C14 |
C15 |
O01 |
180.7 |
180.0 |
H13 |
C17 |
O02 |
H15 |
240.0 |
240.0 |
H13 |
C17 |
O02 |
H14 |
120.0 |
120.0 |
H15 |
C17 |
O02 |
H14 |
240.0 |
240.0 |
C14 |
O02 |
C17 |
H13 |
180.0 |
300.0 |
C14 |
O02 |
C17 |
H15 |
300.0 |
60.0 |
C14 |
O02 |
C17 |
H14 |
60.0 |
180.0 |
C11 |
C12 |
C13 |
C14 |
0.2 |
360.0 |
C13 |
C12 |
C11 |
H11 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
N01 |
197.5 |
270.0 |
C12 |
C11 |
C10 |
H09 |
318.1 |
30.0 |
C12 |
C11 |
C10 |
H10 |
77.0 |
150.0 |
C15 |
C16 |
C11 |
C12 |
360.0 |
0.0 |
C12 |
C11 |
C16 |
H12 |
180.0 |
180.1 |
C14 |
C15 |
C16 |
C11 |
359.9 |
0.0 |
C16 |
C15 |
C14 |
O01 |
179.6 |
180.0 |
C14 |
C15 |
C16 |
H12 |
179.9 |
180.0 |
C14 |
C15 |
O01 |
C18 |
290.2 |
180.0 |
C11 |
C10 |
N01 |
C08 |
193.2 |
190.0 |
C11 |
C10 |
N01 |
C09 |
72.3 |
67.0 |
N01 |
C10 |
C11 |
H09 |
239.5 |
240.0 |
N01 |
C10 |
C11 |
H10 |
120.5 |
120.0 |
H09 |
C10 |
C11 |
H10 |
241.1 |
240.0 |
C16 |
C11 |
C10 |
N01 |
17.0 |
90.0 |
C16 |
C11 |
C10 |
H09 |
137.5 |
210.0 |
C16 |
C11 |
C10 |
H10 |
256.5 |
330.0 |
C11 |
C16 |
C15 |
O01 |
179.4 |
180.0 |
C15 |
C16 |
C11 |
H12 |
180.0 |
179.9 |
C12 |
C11 |
C16 |
C15 |
360.0 |
0.0 |
C14 |
C15 |
C16 |
O01 |
180.4 |
180.0 |
C11 |
C16 |
C15 |
H12 |
180.0 |
180.1 |
C16 |
C15 |
O01 |
C18 |
110.6 |
0.1 |
C14 |
C15 |
O01 |
C16 |
179.6 |
180.0 |
O01 |
C15 |
C16 |
C11 |
179.4 |
180.0 |
O01 |
C15 |
C16 |
H12 |
359.5 |
359.9 |
C15 |
O01 |
C18 |
H17 |
180.0 |
299.9 |
C15 |
O01 |
C18 |
H16 |
300.0 |
59.9 |
C15 |
O01 |
C18 |
H18 |
60.0 |
180.0 |
C11 |
C10 |
N01 |
H09 |
120.5 |
120.0 |
C11 |
C10 |
N01 |
H10 |
239.5 |
240.0 |
C10 |
N01 |
C08 |
H06 |
283.6 |
45.6 |
C10 |
N01 |
C08 |
H05 |
44.0 |
285.1 |
C10 |
N01 |
C09 |
H08 |
296.3 |
55.8 |
C10 |
N01 |
C09 |
H07 |
55.9 |
296.3 |
H09 |
C10 |
N01 |
H10 |
119.0 |
120.0 |
H17 |
C18 |
O01 |
H16 |
240.0 |
240.0 |
H17 |
C18 |
O01 |
H18 |
120.0 |
120.0 |
H16 |
C18 |
O01 |
H18 |
240.0 |
239.9 |
C10 |
N01 |
C08 |
C09 |
236.4 |
236.5 |
C08 |
N01 |
C10 |
H09 |
72.6 |
70.0 |
C08 |
N01 |
C10 |
H10 |
313.7 |
310.0 |
N01 |
C08 |
C07 |
H04 |
171.4 |
290.2 |
N01 |
C08 |
C07 |
H03 |
291.0 |
170.5 |
H06 |
C08 |
N01 |
H05 |
239.6 |
120.5 |
C10 |
N01 |
C09 |
C08 |
121.7 |
123.5 |
C09 |
N01 |
C10 |
H09 |
311.8 |
307.0 |
C09 |
N01 |
C10 |
H10 |
192.8 |
187.0 |
C09 |
N01 |
C08 |
H06 |
47.2 |
169.1 |
C09 |
N01 |
C08 |
H05 |
167.6 |
48.6 |
H08 |
C09 |
N01 |
H07 |
240.4 |
119.5 |
C10 |
N01 |
C08 |
C07 |
163.8 |
165.4 |
H04 |
C07 |
C08 |
H03 |
240.4 |
119.8 |
C10 |
N01 |
C09 |
C05 |
176.1 |
176.1 |
C09 |
C05 |
C06 |
H02 |
0.1 |
359.4 |
C07 |
C04 |
C03 |
H01 |
0.3 |
359.5 |
C05 |
C04 |
C03 |
H01 |
179.7 |
179.8 |
C05 |
C06 |
C01 |
O03 |
180.1 |
179.8 |
C04 |
C03 |
C02 |
O04 |
179.9 |
180.0 |
C02 |
C01 |
C06 |
O03 |
180.1 |
179.7 |
C06 |
C01 |
C02 |
O04 |
180.1 |
180.4 |
C06 |
C01 |
O03 |
C19 |
31.0 |
359.7 |
C03 |
C02 |
C01 |
O03 |
180.1 |
180.1 |
C01 |
C02 |
C03 |
O04 |
180.1 |
180.0 |
C03 |
C02 |
O04 |
S01 |
73.2 |
270.0 |
C06 |
C01 |
C02 |
O03 |
179.9 |
180.3 |
C03 |
C02 |
C01 |
O04 |
179.9 |
180.0 |
C02 |
C01 |
O03 |
C19 |
210.9 |
180.0 |
C01 |
C02 |
O04 |
S01 |
253.1 |
90.0 |
O03 |
C01 |
C02 |
O04 |
0.2 |
0.0 |
C01 |
O03 |
C19 |
H21 |
180.0 |
300.0 |
C01 |
O03 |
C19 |
H20 |
300.0 |
60.1 |
C01 |
O03 |
C19 |
H19 |
60.0 |
180.0 |
H21 |
C19 |
O03 |
H20 |
240.0 |
239.9 |
H21 |
C19 |
O03 |
H19 |
120.0 |
120.0 |
H20 |
C19 |
O03 |
H19 |
240.0 |
240.0 |
O04 |
C02 |
C01 |
O03 |
0.2 |
0.0 |
C02 |
O04 |
S01 |
O06 |
317.5 |
188.5 |
C02 |
O04 |
S01 |
O05 |
192.2 |
321.5 |
O04 |
S01 |
N02 |
H22 |
180.0 |
0.1 |
O04 |
S01 |
N02 |
H23 |
300.0 |
179.9 |
O04 |
S01 |
O06 |
O05 |
239.5 |
122.9 |
O06 |
S01 |
N02 |
H22 |
297.9 |
246.5 |
O06 |
S01 |
N02 |
H23 |
57.8 |
66.4 |
C02 |
O04 |
S01 |
N02 |
75.5 |
75.0 |
H22 |
N02 |
S01 |
H23 |
240.1 |
180.1 |
O04 |
S01 |
O05 |
O06 |
121.6 |
237.0 |
O05 |
S01 |
N02 |
H22 |
64.7 |
113.6 |
O05 |
S01 |
N02 |
H23 |
184.6 |
293.4 |
C11 |
C10 |
H09 |
N01 |
236.8 |
240.0 |
C11 |
C10 |
H09 |
H10 |
118.4 |
120.0 |
H09 |
C10 |
N01 |
C08 |
72.6 |
70.0 |
H09 |
C10 |
N01 |
C09 |
311.8 |
307.0 |
N01 |
C10 |
H09 |
H10 |
241.6 |
240.0 |
C11 |
C10 |
H10 |
N01 |
123.2 |
120.1 |
C11 |
C10 |
H10 |
H09 |
241.6 |
240.1 |
H10 |
C10 |
N01 |
C08 |
313.7 |
310.0 |
H10 |
C10 |
N01 |
C09 |
192.8 |
187.0 |
N01 |
C10 |
H10 |
H09 |
118.4 |
120.0 |
H13 |
C17 |
O02 |
C14 |
180.0 |
300.0 |
O02 |
C17 |
H13 |
H15 |
120.0 |
120.0 |
O02 |
C17 |
H13 |
H14 |
240.0 |
240.0 |
H15 |
C17 |
H13 |
H14 |
120.0 |
120.0 |
H15 |
C17 |
O02 |
C14 |
300.0 |
60.0 |
O02 |
C17 |
H15 |
H13 |
240.0 |
240.0 |
O02 |
C17 |
H15 |
H14 |
120.0 |
120.0 |
H13 |
C17 |
H15 |
H14 |
240.0 |
240.0 |
H14 |
C17 |
O02 |
C14 |
60.0 |
180.0 |
O02 |
C17 |
H14 |
H13 |
120.0 |
120.0 |
O02 |
C17 |
H14 |
H15 |
240.0 |
240.0 |
H13 |
C17 |
H14 |
H15 |
120.0 |
120.0 |
H01 |
C03 |
C02 |
O04 |
359.9 |
0.0 |
H02 |
C06 |
C01 |
O03 |
0.1 |
0.3 |
C08 |
C07 |
H04 |
H03 |
119.3 |
240.3 |
C08 |
C07 |
H03 |
H04 |
240.7 |
119.7 |
N01 |
C08 |
H06 |
H05 |
120.6 |
239.4 |
H06 |
C08 |
C07 |
H04 |
51.6 |
50.0 |
H06 |
C08 |
C07 |
H03 |
171.2 |
290.2 |
N01 |
C08 |
H05 |
H06 |
239.4 |
120.5 |
H05 |
C08 |
C07 |
H04 |
291.2 |
170.4 |
H05 |
C08 |
C07 |
H03 |
50.8 |
50.6 |
N01 |
C09 |
H08 |
H07 |
119.4 |
240.5 |
N01 |
C09 |
H07 |
H08 |
240.7 |
119.5 |
H11 |
C12 |
C13 |
C14 |
180.2 |
180.0 |
C13 |
C12 |
H11 |
C11 |
180.0 |
180.0 |
H11 |
C12 |
C11 |
C16 |
180.0 |
180.0 |
C15 |
C16 |
H12 |
C11 |
180.0 |
180.1 |
H12 |
C16 |
C15 |
O01 |
359.5 |
359.9 |
O01 |
C18 |
H17 |
H16 |
120.0 |
120.1 |
O01 |
C18 |
H17 |
H18 |
240.0 |
240.0 |
H16 |
C18 |
H17 |
H18 |
120.0 |
119.9 |
O01 |
C18 |
H16 |
H17 |
240.0 |
240.0 |
O01 |
C18 |
H16 |
H18 |
120.0 |
120.1 |
H17 |
C18 |
H16 |
H18 |
240.0 |
240.1 |
O01 |
C18 |
H18 |
H17 |
120.0 |
120.0 |
O01 |
C18 |
H18 |
H16 |
240.0 |
239.9 |
H17 |
C18 |
H18 |
H16 |
120.0 |
119.9 |
O03 |
C19 |
H21 |
H20 |
120.0 |
120.1 |
O03 |
C19 |
H21 |
H19 |
240.0 |
240.1 |
H20 |
C19 |
H21 |
H19 |
120.0 |
120.0 |
O03 |
C19 |
H20 |
H21 |
240.0 |
239.9 |
O03 |
C19 |
H20 |
H19 |
120.0 |
119.9 |
H21 |
C19 |
H20 |
H19 |
240.0 |
240.0 |
O03 |
C19 |
H19 |
H21 |
120.0 |
120.0 |
O03 |
C19 |
H19 |
H20 |
240.0 |
240.0 |
H21 |
C19 |
H19 |
H20 |
120.0 |
120.0 |
S01 |
N02 |
H22 |
H23 |
120.0 |
179.9 |
S01 |
N02 |
H23 |
H22 |
240.0 |
180.1 |