PDB Chemical Component GW9
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GW9
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CL |
C9 |
1.804 |
1.735 |
C9 |
C10 |
1.423 |
1.381 |
C9 |
C8 |
1.454 |
1.397 |
C10 |
C11 |
1.415 |
1.382 |
C10 |
H10 |
1.080 |
1.080 |
C11 |
C12 |
1.420 |
1.384 |
C11 |
H11 |
1.080 |
1.081 |
C12 |
N2 |
1.432 |
1.480 |
C12 |
C13 |
1.431 |
1.379 |
N2 |
O3 |
1.229 |
1.218 |
N2 |
O2 |
1.230 |
1.219 |
C13 |
C8 |
1.435 |
1.396 |
C13 |
H13 |
1.080 |
1.081 |
C8 |
C1 |
1.543 |
1.477 |
C1 |
O1 |
1.234 |
1.216 |
C1 |
N1 |
1.375 |
1.348 |
N1 |
C2 |
1.402 |
1.399 |
N1 |
HN1 |
0.999 |
0.970 |
C2 |
C7 |
1.428 |
1.388 |
C2 |
C3 |
1.445 |
1.389 |
C7 |
C6 |
1.416 |
1.381 |
C7 |
H7 |
1.080 |
1.080 |
C6 |
C5 |
1.418 |
1.383 |
C6 |
H6 |
1.080 |
1.080 |
C5 |
C4 |
1.408 |
1.383 |
C5 |
H5 |
1.080 |
1.080 |
C4 |
C3 |
1.420 |
1.382 |
C4 |
H4 |
1.080 |
1.080 |
C3 |
H3 |
1.079 |
1.079 |
Bond Angles for GW9
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CL |
C9 |
C10 |
118.0 |
120.1 |
CL |
C9 |
C8 |
121.4 |
120.1 |
C10 |
C9 |
C8 |
120.6 |
119.8 |
C9 |
C10 |
C11 |
122.2 |
120.2 |
C9 |
C10 |
H10 |
118.9 |
119.9 |
C9 |
C8 |
C13 |
115.8 |
119.7 |
C9 |
C8 |
C1 |
134.3 |
120.2 |
C11 |
C10 |
H10 |
118.9 |
119.9 |
C10 |
C11 |
C12 |
118.7 |
120.3 |
C10 |
C11 |
H11 |
120.6 |
119.9 |
C12 |
C11 |
H11 |
120.7 |
119.8 |
C11 |
C12 |
N2 |
121.5 |
120.0 |
C11 |
C12 |
C13 |
119.5 |
120.2 |
N2 |
C12 |
C13 |
119.0 |
119.9 |
C12 |
N2 |
O3 |
119.6 |
120.0 |
C12 |
N2 |
O2 |
121.4 |
120.0 |
C12 |
C13 |
C8 |
123.2 |
119.9 |
C12 |
C13 |
H13 |
118.4 |
120.1 |
O3 |
N2 |
O2 |
119.0 |
120.0 |
C8 |
C13 |
H13 |
118.4 |
120.0 |
C13 |
C8 |
C1 |
109.8 |
120.1 |
C8 |
C1 |
O1 |
117.7 |
120.0 |
C8 |
C1 |
N1 |
122.4 |
120.0 |
O1 |
C1 |
N1 |
119.6 |
120.0 |
C1 |
N1 |
C2 |
131.8 |
120.0 |
C1 |
N1 |
HN1 |
114.1 |
120.0 |
C2 |
N1 |
HN1 |
114.1 |
120.0 |
N1 |
C2 |
C7 |
116.7 |
120.1 |
N1 |
C2 |
C3 |
127.4 |
120.0 |
C7 |
C2 |
C3 |
115.9 |
119.9 |
C2 |
C7 |
C6 |
122.0 |
119.9 |
C2 |
C7 |
H7 |
119.0 |
120.0 |
C2 |
C3 |
C4 |
122.3 |
119.9 |
C2 |
C3 |
H3 |
118.9 |
120.1 |
C6 |
C7 |
H7 |
119.0 |
120.1 |
C7 |
C6 |
C5 |
120.5 |
120.1 |
C7 |
C6 |
H6 |
119.8 |
120.0 |
C5 |
C6 |
H6 |
119.8 |
119.9 |
C6 |
C5 |
C4 |
119.5 |
120.1 |
C6 |
C5 |
H5 |
120.3 |
120.0 |
C4 |
C5 |
H5 |
120.2 |
119.9 |
C5 |
C4 |
C3 |
119.8 |
120.1 |
C5 |
C4 |
H4 |
120.1 |
120.0 |
C3 |
C4 |
H4 |
120.1 |
119.9 |
C4 |
C3 |
H3 |
118.9 |
120.0 |
Torsion Angles for GW9
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C9 |
CL |
C8 |
179.5 |
180.3 |
CL |
C9 |
C10 |
C11 |
180.2 |
180.0 |
CL |
C9 |
C10 |
H10 |
0.2 |
360.0 |
CL |
C9 |
C8 |
C13 |
179.8 |
179.9 |
CL |
C9 |
C8 |
C1 |
0.2 |
0.1 |
CL |
C9 |
C10 |
C8 |
180.5 |
179.7 |
C10 |
C9 |
C8 |
C13 |
0.4 |
359.6 |
C10 |
C9 |
C8 |
C1 |
180.7 |
179.8 |
C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
C9 |
C10 |
C11 |
C12 |
0.2 |
360.0 |
C9 |
C10 |
C11 |
H11 |
180.2 |
180.0 |
CL |
C9 |
C8 |
C10 |
179.5 |
180.3 |
C8 |
C9 |
C10 |
C11 |
359.7 |
0.3 |
C8 |
C9 |
C10 |
H10 |
179.7 |
180.3 |
C12 |
C13 |
C8 |
C9 |
359.6 |
0.4 |
C9 |
C8 |
C13 |
H13 |
179.7 |
180.3 |
C13 |
C8 |
C9 |
C1 |
179.6 |
179.8 |
C9 |
C8 |
C1 |
O1 |
32.7 |
0.0 |
C9 |
C8 |
C1 |
N1 |
206.7 |
180.0 |
C11 |
C10 |
C9 |
C8 |
359.7 |
0.3 |
C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
N2 |
180.1 |
180.0 |
C10 |
C11 |
C12 |
C13 |
359.8 |
360.0 |
H10 |
C10 |
C9 |
C8 |
179.7 |
180.3 |
C9 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
H10 |
C10 |
C11 |
C12 |
180.2 |
179.9 |
H10 |
C10 |
C11 |
H11 |
0.2 |
359.9 |
C12 |
C11 |
C10 |
H10 |
180.2 |
179.9 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
N2 |
C12 |
C11 |
C13 |
180.4 |
180.0 |
C11 |
C12 |
N2 |
O3 |
179.8 |
0.1 |
C11 |
C12 |
N2 |
O2 |
359.7 |
180.0 |
C11 |
C12 |
C13 |
C8 |
0.3 |
359.8 |
C11 |
C12 |
C13 |
H13 |
180.3 |
180.0 |
H11 |
C11 |
C10 |
H10 |
0.2 |
359.9 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
H11 |
C11 |
C12 |
N2 |
0.1 |
360.0 |
H11 |
C11 |
C12 |
C13 |
179.8 |
180.0 |
N2 |
C12 |
C11 |
H11 |
0.1 |
360.0 |
C11 |
C12 |
N2 |
C13 |
179.6 |
180.0 |
N2 |
C12 |
C13 |
C8 |
180.0 |
179.8 |
N2 |
C12 |
C13 |
H13 |
359.9 |
360.0 |
O3 |
N2 |
C12 |
O2 |
180.1 |
180.0 |
C9 |
C8 |
C13 |
C12 |
359.6 |
0.4 |
C13 |
C12 |
C11 |
H11 |
179.8 |
180.0 |
C11 |
C12 |
C13 |
N2 |
180.3 |
180.0 |
C13 |
C12 |
N2 |
O3 |
0.2 |
180.1 |
C13 |
C12 |
N2 |
O2 |
180.1 |
0.0 |
C8 |
C13 |
C12 |
H13 |
180.0 |
179.9 |
C12 |
C13 |
C8 |
C1 |
179.4 |
180.2 |
O3 |
N2 |
C12 |
C13 |
0.2 |
180.1 |
C12 |
N2 |
O3 |
O2 |
179.9 |
180.0 |
O2 |
N2 |
C12 |
C13 |
180.1 |
0.0 |
C12 |
N2 |
O2 |
O3 |
180.1 |
180.0 |
C9 |
C8 |
C13 |
C1 |
180.3 |
180.2 |
C12 |
C13 |
C8 |
H13 |
180.0 |
180.1 |
C13 |
C8 |
C1 |
O1 |
213.1 |
180.2 |
C13 |
C8 |
C1 |
N1 |
27.0 |
0.2 |
C12 |
C13 |
H13 |
C8 |
180.0 |
179.9 |
H13 |
C13 |
C8 |
C1 |
359.4 |
0.1 |
C9 |
C8 |
C1 |
C13 |
179.7 |
179.8 |
C1 |
C8 |
C13 |
H13 |
359.4 |
0.1 |
O1 |
C1 |
C8 |
N1 |
186.0 |
180.0 |
C8 |
C1 |
N1 |
C2 |
188.0 |
175.4 |
C8 |
C1 |
N1 |
HN1 |
8.0 |
355.3 |
C8 |
C1 |
O1 |
N1 |
174.2 |
180.0 |
O1 |
C1 |
N1 |
C2 |
1.9 |
355.4 |
O1 |
C1 |
N1 |
HN1 |
181.9 |
175.3 |
C8 |
C1 |
N1 |
O1 |
186.1 |
180.0 |
C2 |
N1 |
C1 |
HN1 |
180.0 |
180.1 |
C1 |
N1 |
C2 |
C7 |
179.9 |
35.0 |
C1 |
N1 |
C2 |
C3 |
0.4 |
214.8 |
C1 |
N1 |
C2 |
HN1 |
180.0 |
179.9 |
C7 |
C2 |
N1 |
C3 |
179.5 |
180.3 |
N1 |
C2 |
C7 |
C6 |
180.4 |
180.0 |
N1 |
C2 |
C7 |
H7 |
0.4 |
360.0 |
N1 |
C2 |
C3 |
C4 |
179.6 |
179.7 |
N1 |
C2 |
C3 |
H3 |
359.6 |
360.0 |
C1 |
N1 |
HN1 |
C2 |
180.0 |
180.1 |
HN1 |
N1 |
C2 |
C7 |
359.9 |
215.2 |
HN1 |
N1 |
C2 |
C3 |
180.4 |
34.9 |
C7 |
C2 |
N1 |
HN1 |
359.9 |
215.2 |
N1 |
C2 |
C7 |
C3 |
180.4 |
179.7 |
C7 |
C2 |
C3 |
C4 |
0.1 |
359.5 |
C7 |
C2 |
C3 |
H3 |
180.1 |
179.7 |
C6 |
C7 |
C2 |
H7 |
180.0 |
180.1 |
C2 |
C7 |
C6 |
C5 |
0.0 |
0.0 |
C2 |
C7 |
C6 |
H6 |
180.0 |
180.0 |
C3 |
C2 |
N1 |
HN1 |
180.4 |
34.9 |
N1 |
C2 |
C3 |
C7 |
179.5 |
180.3 |
C3 |
C2 |
C7 |
C6 |
360.0 |
0.3 |
C3 |
C2 |
C7 |
H7 |
180.0 |
180.2 |
C5 |
C4 |
C3 |
C2 |
359.9 |
0.5 |
C2 |
C3 |
C4 |
H4 |
179.9 |
180.3 |
C4 |
C3 |
C2 |
H3 |
180.0 |
179.7 |
C6 |
C7 |
C2 |
C3 |
360.0 |
0.3 |
C2 |
C7 |
C6 |
H7 |
180.0 |
179.9 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
C4 |
359.9 |
359.9 |
C7 |
C6 |
C5 |
H5 |
179.9 |
180.0 |
H7 |
C7 |
C2 |
C3 |
180.0 |
180.2 |
C2 |
C7 |
H7 |
C6 |
180.0 |
180.1 |
H7 |
C7 |
C6 |
C5 |
180.0 |
180.1 |
H7 |
C7 |
C6 |
H6 |
360.0 |
0.0 |
C5 |
C6 |
C7 |
H7 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
H6 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.9 |
C6 |
C5 |
C4 |
C3 |
0.1 |
359.8 |
C6 |
C5 |
C4 |
H4 |
180.1 |
180.0 |
H6 |
C6 |
C7 |
H7 |
360.0 |
0.0 |
C7 |
C6 |
H6 |
C5 |
180.0 |
180.1 |
H6 |
C6 |
C5 |
C4 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
359.9 |
0.1 |
C2 |
C3 |
C4 |
C5 |
359.9 |
0.5 |
C4 |
C5 |
C6 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
H4 |
180.0 |
179.8 |
C5 |
C4 |
C3 |
H3 |
179.9 |
180.2 |
H5 |
C5 |
C6 |
H6 |
359.9 |
0.1 |
C6 |
C5 |
H5 |
C4 |
180.0 |
179.9 |
H5 |
C5 |
C4 |
C3 |
180.1 |
179.7 |
H5 |
C5 |
C4 |
H4 |
0.1 |
360.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.3 |
C3 |
C4 |
C5 |
H5 |
180.1 |
179.7 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.2 |
H4 |
C4 |
C5 |
H5 |
0.1 |
360.0 |
C5 |
C4 |
H4 |
C3 |
180.0 |
179.8 |
H4 |
C4 |
C3 |
H3 |
359.9 |
0.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
179.7 |
H3 |
C3 |
C4 |
H4 |
359.9 |
0.0 |