PDB Chemical Component GTT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GTT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 CA1 1.483 1.469
N1 HN11 1.000 1.010
N1 HN12 1.000 1.009
N1 HN13 1.000 1.008
CA1 C1 1.557 1.506
CA1 CB1 1.555 1.531
CA1 HA1 1.100 1.091
C1 O11 1.256 1.209
C1 O12 1.253 1.342
O12 HO2 0.950 0.967
CB1 CG1 1.565 1.530
CB1 HB11 1.100 1.090
CB1 HB12 1.100 1.089
CG1 CD1 1.535 1.508
CG1 HG11 1.100 1.089
CG1 HG12 1.100 1.090
CD1 OE1 1.238 1.213
CD1 N2 1.345 1.347
N2 CA2 1.483 1.465
N2 HN2 1.000 0.970
CA2 C2 1.585 1.507
CA2 CB2 1.544 1.529
CA2 HA2 1.100 1.090
C2 O2 1.232 1.213
C2 N3 1.352 1.348
CB2 SG2 1.840 1.815
CB2 HB21 1.100 1.090
CB2 HB22 1.099 1.090
SG2 HSG 1.300 1.345
N3 CA3 1.483 1.465
N3 HN3 1.000 0.970
CA3 C3 1.527 1.507
CA3 HA31 1.100 1.090
CA3 HA32 1.100 1.090
C3 O31 1.260 1.209
C3 O32 1.241 1.341
O32 HO3 0.950 0.967

Bond Angles for GTT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA1 N1 HN11 109.5 109.5
CA1 N1 HN12 109.4 109.4
CA1 N1 HN13 109.5 109.5
N1 CA1 C1 112.2 109.5
N1 CA1 CB1 108.7 109.5
N1 CA1 HA1 108.0 109.5
HN11 N1 HN12 109.5 109.4
HN11 N1 HN13 109.4 109.5
HN12 N1 HN13 109.5 109.5
C1 CA1 CB1 113.4 109.5
C1 CA1 HA1 107.1 109.5
CA1 C1 O11 120.8 120.0
CA1 C1 O12 117.7 120.0
CB1 CA1 HA1 107.2 109.4
CA1 CB1 CG1 117.1 109.4
CA1 CB1 HB11 107.5 109.4
CA1 CB1 HB12 107.5 109.5
O11 C1 O12 121.5 120.0
C1 O12 HO2 109.5 117.0
CG1 CB1 HB11 107.5 109.5
CG1 CB1 HB12 107.6 109.5
CB1 CG1 CD1 117.5 109.4
CB1 CG1 HG11 107.4 109.5
CB1 CG1 HG12 107.4 109.5
HB11 CB1 HB12 109.4 109.5
CD1 CG1 HG11 107.5 109.5
CD1 CG1 HG12 107.5 109.4
CG1 CD1 OE1 120.7 120.0
CG1 CD1 N2 116.3 120.0
HG11 CG1 HG12 109.5 109.5
OE1 CD1 N2 123.0 120.0
CD1 N2 CA2 120.0 120.0
CD1 N2 HN2 120.0 120.0
CA2 N2 HN2 120.0 120.0
N2 CA2 C2 114.0 109.5
N2 CA2 CB2 108.3 109.5
N2 CA2 HA2 108.8 109.4
C2 CA2 CB2 110.2 109.5
C2 CA2 HA2 107.5 109.4
CA2 C2 O2 118.9 120.0
CA2 C2 N3 114.9 120.0
CB2 CA2 HA2 108.0 109.5
CA2 CB2 SG2 114.6 109.5
CA2 CB2 HB21 108.2 109.5
CA2 CB2 HB22 108.2 109.5
O2 C2 N3 125.9 120.0
C2 N3 CA3 119.2 120.0
C2 N3 HN3 120.4 120.0
SG2 CB2 HB21 108.2 109.5
SG2 CB2 HB22 108.2 109.5
CB2 SG2 HSG 102.0 103.0
HB21 CB2 HB22 109.5 109.5
CA3 N3 HN3 120.4 120.0
N3 CA3 C3 114.4 109.5
N3 CA3 HA31 108.2 109.5
N3 CA3 HA32 108.2 109.5
C3 CA3 HA31 108.2 109.5
C3 CA3 HA32 108.2 109.5
CA3 C3 O31 121.4 120.0
CA3 C3 O32 115.2 120.0
HA31 CA3 HA32 109.4 109.5
O31 C3 O32 123.4 120.0
C3 O32 HO3 109.5 117.0

Torsion Angles for GTT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HN11 N1 CA1 HN12 239.9 240.1
HN11 N1 CA1 HN13 120.0 120.0
HN12 N1 CA1 HN13 240.0 240.0
C1 CA1 N1 CB1 126.2 120.0
C1 CA1 N1 HA1 242.2 240.0
N1 CA1 C1 O11 290.1 340.0
N1 CA1 C1 O12 110.2 160.0
CB1 CA1 N1 HA1 116.0 120.0
N1 CA1 CB1 CG1 172.8 295.0
N1 CA1 CB1 HB11 293.9 55.0
N1 CA1 CB1 HB12 51.7 175.0
CA1 N1 HN11 HN12 120.0 119.9
CA1 N1 HN11 HN13 240.0 240.0
HN11 N1 CA1 C1 180.0 180.1
HN11 N1 CA1 CB1 53.8 60.0
HN11 N1 CA1 HA1 297.8 300.1
HN12 N1 HN11 HN13 120.0 120.0
CA1 N1 HN12 HN11 239.9 240.0
CA1 N1 HN12 HN13 120.0 120.0
HN12 N1 CA1 C1 300.0 300.0
HN12 N1 CA1 CB1 173.8 180.0
HN12 N1 CA1 HA1 57.9 60.0
HN11 N1 HN12 HN13 240.0 240.0
CA1 N1 HN13 HN11 120.0 120.0
CA1 N1 HN13 HN12 240.0 240.0
HN13 N1 CA1 C1 60.0 60.0
HN13 N1 CA1 CB1 293.8 300.0
HN13 N1 CA1 HA1 177.8 180.1
HN11 N1 HN13 HN12 120.0 120.0
C1 CA1 N1 HN11 180.0 180.1
C1 CA1 N1 HN12 300.0 300.0
C1 CA1 N1 HN13 60.0 60.0
N1 CA1 C1 CB1 236.4 240.0
N1 CA1 C1 HA1 118.4 120.0
CB1 CA1 C1 HA1 241.9 240.0
C1 CA1 CB1 CG1 47.4 175.0
C1 CA1 CB1 HB11 168.5 295.0
C1 CA1 CB1 HB12 286.2 55.0
O11 C1 CA1 O12 179.9 180.0
CA1 C1 O12 HO2 179.9 180.0
CB1 CA1 N1 HN11 53.8 60.0
CB1 CA1 N1 HN12 173.8 180.0
CB1 CA1 N1 HN13 293.8 300.0
N1 CA1 CB1 C1 125.5 120.0
N1 CA1 CB1 HA1 243.5 240.0
C1 CA1 CB1 HA1 118.0 120.0
CB1 CA1 C1 O11 53.7 100.0
CB1 CA1 C1 O12 233.8 280.0
CG1 CB1 CA1 HB11 238.9 240.0
CG1 CB1 CA1 HB12 121.1 120.0
CA1 CB1 CG1 CD1 124.8 180.0
CA1 CB1 CG1 HG11 246.0 300.0
CA1 CB1 CG1 HG12 3.7 60.0
HB11 CB1 CA1 HB12 242.3 240.0
HA1 CA1 N1 HN11 297.8 300.1
HA1 CA1 N1 HN12 57.9 60.0
HA1 CA1 N1 HN13 177.8 180.1
N1 CA1 HA1 C1 239.0 240.0
N1 CA1 HA1 CB1 116.9 120.0
C1 CA1 HA1 CB1 237.9 240.0
HA1 CA1 C1 O11 171.8 220.0
HA1 CA1 C1 O12 351.9 40.0
HA1 CA1 CB1 CG1 289.3 55.0
HA1 CA1 CB1 HB11 50.4 175.0
HA1 CA1 CB1 HB12 168.2 295.0
O11 C1 CA1 CB1 53.7 100.0
O11 C1 CA1 HA1 171.8 220.0
CA1 C1 O11 O12 180.1 180.0
O11 C1 O12 HO2 360.0 0.0
O12 C1 CA1 CB1 233.8 280.0
O12 C1 CA1 HA1 351.9 40.0
CA1 C1 O12 O11 179.9 180.0
CG1 CB1 CA1 HA1 289.3 55.0
CA1 CB1 CG1 HB11 121.1 119.9
CA1 CB1 CG1 HB12 238.9 240.0
HB11 CB1 CG1 HB12 117.8 120.1
CD1 CG1 CB1 HG11 238.8 240.0
CD1 CG1 CB1 HG12 121.2 119.9
CB1 CG1 CD1 OE1 21.5 0.1
CB1 CG1 CD1 N2 201.1 180.0
HG11 CG1 CB1 HG12 242.4 240.0
HB11 CB1 CA1 HA1 50.4 175.0
CA1 CB1 HB11 CG1 233.0 240.1
CA1 CB1 HB11 HB12 116.5 120.0
CG1 CB1 HB11 HB12 243.5 239.9
HB11 CB1 CG1 CD1 3.7 60.0
HB11 CB1 CG1 HG11 124.9 180.0
HB11 CB1 CG1 HG12 242.5 300.1
HB12 CB1 CA1 HA1 168.2 295.0
CA1 CB1 HB12 CG1 127.0 120.0
CA1 CB1 HB12 HB11 243.5 240.0
CG1 CB1 HB12 HB11 116.5 120.1
HB12 CB1 CG1 CD1 246.0 299.9
HB12 CB1 CG1 HG11 7.1 59.9
HB12 CB1 CG1 HG12 124.8 180.0
CD1 CG1 CB1 HB11 3.7 60.0
CD1 CG1 CB1 HB12 246.0 299.9
CB1 CG1 CD1 HG11 121.1 120.1
CB1 CG1 CD1 HG12 238.8 240.0
HG11 CG1 CD1 HG12 117.7 120.0
OE1 CD1 CG1 N2 180.4 180.1
CG1 CD1 N2 CA2 173.8 180.0
CG1 CD1 N2 HN2 353.8 0.0
HG11 CG1 CB1 HB11 124.9 180.0
HG11 CG1 CB1 HB12 7.1 59.9
CB1 CG1 HG11 CD1 232.7 240.0
CB1 CG1 HG11 HG12 116.3 120.1
CD1 CG1 HG11 HG12 243.6 240.0
HG11 CG1 CD1 OE1 260.3 240.0
HG11 CG1 CD1 N2 79.9 59.9
HG12 CG1 CB1 HB11 242.5 300.1
HG12 CG1 CB1 HB12 124.8 180.0
CB1 CG1 HG12 CD1 127.3 119.9
CB1 CG1 HG12 HG11 243.7 239.9
CD1 CG1 HG12 HG11 116.4 120.0
HG12 CG1 CD1 OE1 142.6 120.0
HG12 CG1 CD1 N2 322.2 300.0
OE1 CD1 CG1 HG11 260.3 240.0
OE1 CD1 CG1 HG12 142.6 120.0
CG1 CD1 OE1 N2 179.5 179.9
OE1 CD1 N2 CA2 353.4 360.0
OE1 CD1 N2 HN2 173.4 180.0
N2 CD1 CG1 HG11 79.9 59.9
N2 CD1 CG1 HG12 322.2 300.0
CG1 CD1 N2 OE1 180.4 180.1
CA2 N2 CD1 HN2 180.0 180.0
CD1 N2 CA2 C2 276.7 205.0
CD1 N2 CA2 CB2 153.6 85.0
CD1 N2 CA2 HA2 36.6 325.0
CD1 N2 CA2 HN2 180.0 180.0
C2 CA2 N2 CB2 123.0 120.0
C2 CA2 N2 HA2 240.1 240.1
N2 CA2 C2 O2 166.9 360.0
N2 CA2 C2 N3 341.1 180.0
CB2 CA2 N2 HA2 117.1 120.0
N2 CA2 CB2 SG2 294.0 300.0
N2 CA2 CB2 HB21 54.8 60.0
N2 CA2 CB2 HB22 173.2 180.0
CD1 N2 HN2 CA2 180.0 180.0
HN2 N2 CA2 C2 96.7 25.1
HN2 N2 CA2 CB2 333.6 265.0
HN2 N2 CA2 HA2 216.5 145.0
C2 CA2 N2 HN2 96.7 25.1
N2 CA2 C2 CB2 238.1 240.0
N2 CA2 C2 HA2 120.6 119.9
CB2 CA2 C2 HA2 242.6 240.0
C2 CA2 CB2 SG2 168.7 180.0
C2 CA2 CB2 HB21 289.5 300.0
C2 CA2 CB2 HB22 48.0 60.0
O2 C2 CA2 N3 185.8 179.9
CA2 C2 N3 CA3 188.1 180.0
CA2 C2 N3 HN3 8.1 359.9
CB2 CA2 N2 HN2 333.6 265.0
N2 CA2 CB2 C2 125.3 120.0
N2 CA2 CB2 HA2 242.4 240.0
C2 CA2 CB2 HA2 117.1 120.0
CB2 CA2 C2 O2 288.9 120.0
CB2 CA2 C2 N3 103.1 300.1
SG2 CB2 CA2 HB21 239.2 240.0
SG2 CB2 CA2 HB22 120.8 120.0
CA2 CB2 SG2 HSG 180.0 180.0
HB21 CB2 CA2 HB22 241.5 240.0
HA2 CA2 N2 HN2 216.5 145.0
N2 CA2 HA2 C2 236.1 240.0
N2 CA2 HA2 CB2 117.3 120.0
C2 CA2 HA2 CB2 241.1 240.0
HA2 CA2 C2 O2 46.3 240.0
HA2 CA2 C2 N3 220.5 60.1
HA2 CA2 CB2 SG2 51.6 60.0
HA2 CA2 CB2 HB21 172.3 180.0
HA2 CA2 CB2 HB22 290.8 300.0
O2 C2 CA2 CB2 288.9 120.0
O2 C2 CA2 HA2 46.3 240.0
CA2 C2 O2 N3 173.5 180.1
O2 C2 N3 CA3 1.8 0.1
O2 C2 N3 HN3 181.8 179.9
N3 C2 CA2 CB2 103.1 300.1
N3 C2 CA2 HA2 220.5 60.1
CA2 C2 N3 O2 186.3 179.9
CA3 N3 C2 HN3 180.0 180.1
C2 N3 CA3 C3 228.7 180.0
C2 N3 CA3 HA31 349.5 300.0
C2 N3 CA3 HA32 108.0 60.0
SG2 CB2 CA2 HA2 51.6 60.0
CA2 CB2 SG2 HB21 120.8 120.0
CA2 CB2 SG2 HB22 239.2 240.0
HB21 CB2 SG2 HB22 118.5 120.0
HB21 CB2 CA2 HA2 172.3 180.0
CA2 CB2 HB21 SG2 235.3 240.0
CA2 CB2 HB21 HB22 117.7 120.0
SG2 CB2 HB21 HB22 242.3 240.0
HB21 CB2 SG2 HSG 59.3 60.0
HB22 CB2 CA2 HA2 290.8 300.0
CA2 CB2 HB22 SG2 124.7 120.0
CA2 CB2 HB22 HB21 242.3 240.0
SG2 CB2 HB22 HB21 117.7 120.0
HB22 CB2 SG2 HSG 300.8 300.0
HSG SG2 CB2 HB21 59.3 60.0
HSG SG2 CB2 HB22 300.8 300.0
C2 N3 CA3 HN3 180.0 179.9
C3 CA3 N3 HA31 239.3 240.0
C3 CA3 N3 HA32 120.7 120.0
N3 CA3 C3 O31 16.0 359.9
N3 CA3 C3 O32 194.3 180.0
HA31 CA3 N3 HA32 241.5 240.0
C2 N3 HN3 CA3 180.0 180.1
HN3 N3 CA3 C3 48.7 0.1
HN3 N3 CA3 HA31 169.5 120.1
HN3 N3 CA3 HA32 288.0 240.1
C3 CA3 N3 HN3 48.7 0.1
N3 CA3 C3 HA31 120.8 120.0
N3 CA3 C3 HA32 239.3 240.0
HA31 CA3 C3 HA32 118.5 120.0
O31 C3 CA3 O32 181.8 179.9
CA3 C3 O32 HO3 181.8 180.0
HA31 CA3 N3 HN3 169.5 120.1
N3 CA3 HA31 C3 235.5 240.0
N3 CA3 HA31 HA32 117.7 120.0
C3 CA3 HA31 HA32 242.3 240.0
HA31 CA3 C3 O31 255.2 239.9
HA31 CA3 C3 O32 73.5 60.0
HA32 CA3 N3 HN3 288.0 240.1
N3 CA3 HA32 C3 124.5 120.0
N3 CA3 HA32 HA31 242.3 240.0
C3 CA3 HA32 HA31 117.7 120.0
HA32 CA3 C3 O31 136.8 119.9
HA32 CA3 C3 O32 315.0 300.0
O31 C3 CA3 HA31 255.2 239.9
O31 C3 CA3 HA32 136.8 119.9
CA3 C3 O31 O32 178.1 180.1
O31 C3 O32 HO3 0.0 0.1
O32 C3 CA3 HA31 73.5 60.0
O32 C3 CA3 HA32 315.0 300.0
CA3 C3 O32 O31 181.8 179.9