PDB Chemical Component GTK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GTK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.422 1.429
C1 C2 1.503 1.545
C1 O4 1.415 1.444
C2 O2 1.447 1.430
C2 C3 1.545 1.545
C3 O3 1.421 1.429
C3 C4 1.534 1.544
C4 O4 1.421 1.445
C4 C5 1.526 1.530
C5 O5 1.419 1.430
C5 C6 1.499 1.507
C6 O6B 1.333 1.342
C6 O6A 1.218 1.209
C1 H1 1.100 1.090
O1 HO1 0.950 0.967
C2 H2 1.100 1.090
O2 HO2 0.950 0.966
C3 H3 1.100 1.090
O3 HO3 0.950 0.967
C4 H4 1.100 1.089
C5 H5 1.100 1.090
O5 HO5 0.950 0.967
O6B HO6B 0.949 0.967

Bond Angles for GTK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 113.8 110.4
O1 C1 O4 105.1 110.4
O1 C1 H1 109.3 110.3
C1 O1 HO1 109.5 114.0
C2 C1 O4 108.6 104.8
C1 C2 O2 108.2 110.5
C1 C2 C3 101.9 104.0
C2 C1 H1 105.9 110.4
C1 C2 H2 113.8 110.5
C1 O4 C4 107.1 105.2
O4 C1 H1 114.4 110.5
O2 C2 C3 105.6 110.5
O2 C2 H2 110.6 110.5
C2 O2 HO2 109.5 113.9
C2 C3 O3 107.4 110.5
C2 C3 C4 104.7 104.1
C3 C2 H2 116.1 110.6
C2 C3 H3 113.3 110.5
O3 C3 C4 107.9 110.5
O3 C3 H3 110.4 110.5
C3 O3 HO3 109.5 114.0
C3 C4 O4 108.0 104.8
C3 C4 C5 115.7 110.4
C4 C3 H3 112.8 110.7
C3 C4 H4 107.7 110.4
O4 C4 C5 113.6 110.3
O4 C4 H4 110.1 110.4
C4 C5 O5 105.9 109.5
C4 C5 C6 119.1 109.5
C5 C4 H4 101.4 110.4
C4 C5 H5 104.9 109.5
O5 C5 C6 107.7 109.4
O5 C5 H5 116.9 109.4
C5 O5 HO5 109.5 113.9
C5 C6 O6B 114.6 120.0
C5 C6 O6A 124.5 120.0
C6 C5 H5 102.9 109.5
O6B C6 O6A 120.9 120.0
C6 O6B HO6B 109.5 117.1

Torsion Angles for GTK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 O4 241.4 244.6
O1 C1 C2 O2 198.2 213.5
O1 C1 C2 C3 87.2 94.9
C2 C1 O1 H1 118.1 122.2
O1 C1 C2 H2 321.5 336.1
O1 C1 O4 C4 270.1 281.6
O4 C1 O1 H1 236.7 237.6
O1 C1 C2 O4 116.6 118.9
O1 C1 C2 H1 240.0 237.9
C2 C1 O1 HO1 180.0 180.0
C2 C1 O4 C4 32.2 40.5
O4 C1 C2 H1 123.3 119.0
O2 C2 C1 C3 111.0 118.6
O2 C2 C1 H2 236.7 237.4
C1 C2 O2 HO2 180.0 61.5
C1 C2 C3 O3 261.3 241.3
C1 C2 C3 C4 15.8 360.0
C3 C2 C1 H2 125.7 118.8
C1 C2 C3 H3 139.1 118.8
O1 C1 O4 C2 237.9 241.1
O1 C1 O4 H1 119.9 122.2
O4 C1 O1 HO1 298.6 295.4
O4 C1 C2 O2 81.6 94.6
O4 C1 C2 C3 330.6 336.0
C2 C1 O4 H1 242.0 241.1
O4 C1 C2 H2 204.9 217.3
C3 C4 O4 C1 339.4 319.5
C1 O4 C4 C5 209.6 200.6
C1 O4 C4 H4 96.7 78.3
O2 C2 C1 O4 81.6 94.6
C1 C2 O2 C3 251.5 245.4
O2 C2 C1 H1 318.3 335.7
C1 C2 O2 H2 125.2 122.6
O2 C2 C3 O3 148.3 122.7
O2 C2 C3 C4 262.8 241.4
C3 C2 O2 H2 233.7 237.2
O2 C2 C3 H3 26.2 0.2
C3 C2 C1 O4 330.6 336.0
C1 C2 C3 O2 113.0 118.6
C3 C2 C1 H1 207.2 217.0
C1 C2 C3 H2 235.8 241.3
O2 C2 C3 H2 122.9 122.7
C3 C2 O2 HO2 288.5 176.1
O3 C3 C2 C4 245.5 241.4
O3 C3 C2 H3 122.1 122.5
C2 C3 O3 HO3 180.0 298.5
C2 C3 C4 O4 2.0 24.0
C2 C3 C4 C5 130.6 142.8
C4 C3 C2 H3 236.7 241.2
C2 C3 C4 H4 243.1 265.2
C2 C3 O3 C4 112.4 114.7
O3 C3 C2 H2 25.4 0.1
C2 C3 O3 H3 236.1 237.5
O3 C3 C4 O4 116.2 142.6
O3 C3 C4 C5 244.7 261.5
C4 C3 O3 H3 123.7 122.8
O3 C3 C4 H4 357.2 23.8
C1 O4 C4 C3 339.4 319.5
C2 C3 C4 O3 245.9 241.4
C4 C3 C2 H2 140.0 118.7
C2 C3 C4 H3 123.6 118.7
O3 C3 C4 H3 237.8 237.3
C4 C3 O3 HO3 67.6 183.9
O4 C4 C3 C5 231.5 241.2
O4 C4 C3 H4 118.9 118.8
C3 C4 C5 O5 281.9 305.0
C3 C4 C5 C6 160.6 185.0
C5 C4 C3 H4 247.5 237.7
C3 C4 C5 H5 46.1 65.0
C4 O4 C1 H1 150.2 159.4
C3 C4 O4 C5 129.7 118.9
O4 C4 C3 H3 238.4 265.3
C3 C4 O4 H4 242.6 241.1
O4 C4 C5 O5 47.6 60.4
O4 C4 C5 C6 286.3 300.4
C5 C4 O4 H4 112.9 122.3
O4 C4 C5 H5 171.8 180.4
C3 C4 C5 O4 234.3 244.6
C5 C4 C3 H3 6.9 24.2
C3 C4 C5 H4 116.2 122.3
O4 C4 C5 H4 241.9 237.7
O5 C5 C4 C6 121.3 120.0
O5 C5 C4 H5 235.8 240.0
C4 C5 O5 HO5 234.1 300.0
C4 C5 C6 O6B 295.9 295.0
C4 C5 C6 O6A 114.2 115.0
C6 C5 C4 H5 114.4 120.0
C4 C5 O5 C6 231.6 240.0
O5 C5 C4 H4 165.7 182.7
C4 C5 O5 H5 116.4 120.0
O5 C5 C6 O6B 175.5 175.0
O5 C5 C6 O6A 353.8 355.0
C6 C5 O5 H5 244.8 240.0
C4 C5 C6 O5 120.4 120.0
C6 C5 C4 H4 44.4 62.7
C4 C5 C6 H5 244.5 239.9
O5 C5 C6 H5 124.1 119.9
C6 C5 O5 HO5 2.6 60.0
O6B C6 C5 O6A 181.7 180.0
C5 C6 O6B HO6B 178.4 180.0
C5 C6 O6B O6A 178.4 180.0
O6B C6 C5 H5 51.4 55.0
C5 C6 O6A O6B 181.8 180.0
O6A C6 C5 H5 229.7 235.0
O6A C6 O6B HO6B 0.0 360.0
O1 C1 H1 C2 122.9 122.2
O1 C1 H1 O4 242.5 237.7
H1 C1 O1 HO1 61.9 57.8
C2 C1 H1 O4 119.5 115.5
H1 C1 C2 O2 318.3 335.7
H1 C1 C2 C3 207.2 217.0
H1 C1 C2 H2 81.6 98.3
H1 C1 O4 C4 150.2 159.4
HO1 O1 C1 C2 180.0 180.0
HO1 O1 C1 O4 298.6 295.4
HO1 O1 C1 H1 61.9 57.8
H2 C2 C1 O4 204.9 217.3
C1 C2 H2 O2 238.0 237.4
C1 C2 H2 C3 117.8 114.7
H2 C2 C1 H1 81.6 98.3
O2 C2 H2 C3 239.8 237.3
H2 C2 O2 HO2 54.8 298.8
H2 C2 C3 O3 25.4 0.1
H2 C2 C3 C4 140.0 118.7
H2 C2 C3 H3 263.3 237.5
HO2 O2 C2 C3 288.5 176.1
HO2 O2 C2 H2 54.8 298.8
C2 C3 H3 O3 120.4 122.6
C2 C3 H3 C4 241.2 245.3
H3 C3 C2 H2 263.3 237.5
O3 C3 H3 C4 120.8 122.7
H3 C3 O3 HO3 303.9 61.1
H3 C3 C4 O4 238.4 265.3
H3 C3 C4 C5 6.9 24.2
H3 C3 C4 H4 119.5 146.5
HO3 O3 C3 C4 67.6 183.9
HO3 O3 C3 H3 303.9 61.1
C3 C4 H4 O4 117.5 115.4
C3 C4 H4 C5 238.1 237.7
H4 C4 C3 H3 119.5 146.5
O4 C4 H4 C5 120.5 122.3
H4 C4 C5 O5 165.7 182.7
H4 C4 C5 C6 44.4 62.7
H4 C4 C5 H5 290.0 302.6
C4 C5 H5 O5 243.1 240.0
C4 C5 H5 C6 125.3 120.0
H5 C5 C4 H4 290.0 302.6
O5 C5 H5 C6 242.2 240.0
H5 C5 O5 HO5 117.8 180.0
H5 C5 C6 O6B 51.4 55.0
H5 C5 C6 O6A 229.7 235.0
HO5 O5 C5 C6 2.6 60.0
HO5 O5 C5 H5 117.8 180.0
HO6B O6B C6 O6A 0.0 360.0