PDB Chemical Component GTK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GTK
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O1 |
1.422 |
1.429 |
C1 |
C2 |
1.503 |
1.545 |
C1 |
O4 |
1.415 |
1.444 |
C2 |
O2 |
1.447 |
1.430 |
C2 |
C3 |
1.545 |
1.545 |
C3 |
O3 |
1.421 |
1.429 |
C3 |
C4 |
1.534 |
1.544 |
C4 |
O4 |
1.421 |
1.445 |
C4 |
C5 |
1.526 |
1.530 |
C5 |
O5 |
1.419 |
1.430 |
C5 |
C6 |
1.499 |
1.507 |
C6 |
O6B |
1.333 |
1.342 |
C6 |
O6A |
1.218 |
1.209 |
C1 |
H1 |
1.100 |
1.090 |
O1 |
HO1 |
0.950 |
0.967 |
C2 |
H2 |
1.100 |
1.090 |
O2 |
HO2 |
0.950 |
0.966 |
C3 |
H3 |
1.100 |
1.090 |
O3 |
HO3 |
0.950 |
0.967 |
C4 |
H4 |
1.100 |
1.089 |
C5 |
H5 |
1.100 |
1.090 |
O5 |
HO5 |
0.950 |
0.967 |
O6B |
HO6B |
0.949 |
0.967 |
Bond Angles for GTK
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
113.8 |
110.4 |
O1 |
C1 |
O4 |
105.1 |
110.4 |
O1 |
C1 |
H1 |
109.3 |
110.3 |
C1 |
O1 |
HO1 |
109.5 |
114.0 |
C2 |
C1 |
O4 |
108.6 |
104.8 |
C1 |
C2 |
O2 |
108.2 |
110.5 |
C1 |
C2 |
C3 |
101.9 |
104.0 |
C2 |
C1 |
H1 |
105.9 |
110.4 |
C1 |
C2 |
H2 |
113.8 |
110.5 |
C1 |
O4 |
C4 |
107.1 |
105.2 |
O4 |
C1 |
H1 |
114.4 |
110.5 |
O2 |
C2 |
C3 |
105.6 |
110.5 |
O2 |
C2 |
H2 |
110.6 |
110.5 |
C2 |
O2 |
HO2 |
109.5 |
113.9 |
C2 |
C3 |
O3 |
107.4 |
110.5 |
C2 |
C3 |
C4 |
104.7 |
104.1 |
C3 |
C2 |
H2 |
116.1 |
110.6 |
C2 |
C3 |
H3 |
113.3 |
110.5 |
O3 |
C3 |
C4 |
107.9 |
110.5 |
O3 |
C3 |
H3 |
110.4 |
110.5 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
C3 |
C4 |
O4 |
108.0 |
104.8 |
C3 |
C4 |
C5 |
115.7 |
110.4 |
C4 |
C3 |
H3 |
112.8 |
110.7 |
C3 |
C4 |
H4 |
107.7 |
110.4 |
O4 |
C4 |
C5 |
113.6 |
110.3 |
O4 |
C4 |
H4 |
110.1 |
110.4 |
C4 |
C5 |
O5 |
105.9 |
109.5 |
C4 |
C5 |
C6 |
119.1 |
109.5 |
C5 |
C4 |
H4 |
101.4 |
110.4 |
C4 |
C5 |
H5 |
104.9 |
109.5 |
O5 |
C5 |
C6 |
107.7 |
109.4 |
O5 |
C5 |
H5 |
116.9 |
109.4 |
C5 |
O5 |
HO5 |
109.5 |
113.9 |
C5 |
C6 |
O6B |
114.6 |
120.0 |
C5 |
C6 |
O6A |
124.5 |
120.0 |
C6 |
C5 |
H5 |
102.9 |
109.5 |
O6B |
C6 |
O6A |
120.9 |
120.0 |
C6 |
O6B |
HO6B |
109.5 |
117.1 |
Torsion Angles for GTK
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
O4 |
241.4 |
244.6 |
O1 |
C1 |
C2 |
O2 |
198.2 |
213.5 |
O1 |
C1 |
C2 |
C3 |
87.2 |
94.9 |
C2 |
C1 |
O1 |
H1 |
118.1 |
122.2 |
O1 |
C1 |
C2 |
H2 |
321.5 |
336.1 |
O1 |
C1 |
O4 |
C4 |
270.1 |
281.6 |
O4 |
C1 |
O1 |
H1 |
236.7 |
237.6 |
O1 |
C1 |
C2 |
O4 |
116.6 |
118.9 |
O1 |
C1 |
C2 |
H1 |
240.0 |
237.9 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
180.0 |
C2 |
C1 |
O4 |
C4 |
32.2 |
40.5 |
O4 |
C1 |
C2 |
H1 |
123.3 |
119.0 |
O2 |
C2 |
C1 |
C3 |
111.0 |
118.6 |
O2 |
C2 |
C1 |
H2 |
236.7 |
237.4 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
61.5 |
C1 |
C2 |
C3 |
O3 |
261.3 |
241.3 |
C1 |
C2 |
C3 |
C4 |
15.8 |
360.0 |
C3 |
C2 |
C1 |
H2 |
125.7 |
118.8 |
C1 |
C2 |
C3 |
H3 |
139.1 |
118.8 |
O1 |
C1 |
O4 |
C2 |
237.9 |
241.1 |
O1 |
C1 |
O4 |
H1 |
119.9 |
122.2 |
O4 |
C1 |
O1 |
HO1 |
298.6 |
295.4 |
O4 |
C1 |
C2 |
O2 |
81.6 |
94.6 |
O4 |
C1 |
C2 |
C3 |
330.6 |
336.0 |
C2 |
C1 |
O4 |
H1 |
242.0 |
241.1 |
O4 |
C1 |
C2 |
H2 |
204.9 |
217.3 |
C3 |
C4 |
O4 |
C1 |
339.4 |
319.5 |
C1 |
O4 |
C4 |
C5 |
209.6 |
200.6 |
C1 |
O4 |
C4 |
H4 |
96.7 |
78.3 |
O2 |
C2 |
C1 |
O4 |
81.6 |
94.6 |
C1 |
C2 |
O2 |
C3 |
251.5 |
245.4 |
O2 |
C2 |
C1 |
H1 |
318.3 |
335.7 |
C1 |
C2 |
O2 |
H2 |
125.2 |
122.6 |
O2 |
C2 |
C3 |
O3 |
148.3 |
122.7 |
O2 |
C2 |
C3 |
C4 |
262.8 |
241.4 |
C3 |
C2 |
O2 |
H2 |
233.7 |
237.2 |
O2 |
C2 |
C3 |
H3 |
26.2 |
0.2 |
C3 |
C2 |
C1 |
O4 |
330.6 |
336.0 |
C1 |
C2 |
C3 |
O2 |
113.0 |
118.6 |
C3 |
C2 |
C1 |
H1 |
207.2 |
217.0 |
C1 |
C2 |
C3 |
H2 |
235.8 |
241.3 |
O2 |
C2 |
C3 |
H2 |
122.9 |
122.7 |
C3 |
C2 |
O2 |
HO2 |
288.5 |
176.1 |
O3 |
C3 |
C2 |
C4 |
245.5 |
241.4 |
O3 |
C3 |
C2 |
H3 |
122.1 |
122.5 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
298.5 |
C2 |
C3 |
C4 |
O4 |
2.0 |
24.0 |
C2 |
C3 |
C4 |
C5 |
130.6 |
142.8 |
C4 |
C3 |
C2 |
H3 |
236.7 |
241.2 |
C2 |
C3 |
C4 |
H4 |
243.1 |
265.2 |
C2 |
C3 |
O3 |
C4 |
112.4 |
114.7 |
O3 |
C3 |
C2 |
H2 |
25.4 |
0.1 |
C2 |
C3 |
O3 |
H3 |
236.1 |
237.5 |
O3 |
C3 |
C4 |
O4 |
116.2 |
142.6 |
O3 |
C3 |
C4 |
C5 |
244.7 |
261.5 |
C4 |
C3 |
O3 |
H3 |
123.7 |
122.8 |
O3 |
C3 |
C4 |
H4 |
357.2 |
23.8 |
C1 |
O4 |
C4 |
C3 |
339.4 |
319.5 |
C2 |
C3 |
C4 |
O3 |
245.9 |
241.4 |
C4 |
C3 |
C2 |
H2 |
140.0 |
118.7 |
C2 |
C3 |
C4 |
H3 |
123.6 |
118.7 |
O3 |
C3 |
C4 |
H3 |
237.8 |
237.3 |
C4 |
C3 |
O3 |
HO3 |
67.6 |
183.9 |
O4 |
C4 |
C3 |
C5 |
231.5 |
241.2 |
O4 |
C4 |
C3 |
H4 |
118.9 |
118.8 |
C3 |
C4 |
C5 |
O5 |
281.9 |
305.0 |
C3 |
C4 |
C5 |
C6 |
160.6 |
185.0 |
C5 |
C4 |
C3 |
H4 |
247.5 |
237.7 |
C3 |
C4 |
C5 |
H5 |
46.1 |
65.0 |
C4 |
O4 |
C1 |
H1 |
150.2 |
159.4 |
C3 |
C4 |
O4 |
C5 |
129.7 |
118.9 |
O4 |
C4 |
C3 |
H3 |
238.4 |
265.3 |
C3 |
C4 |
O4 |
H4 |
242.6 |
241.1 |
O4 |
C4 |
C5 |
O5 |
47.6 |
60.4 |
O4 |
C4 |
C5 |
C6 |
286.3 |
300.4 |
C5 |
C4 |
O4 |
H4 |
112.9 |
122.3 |
O4 |
C4 |
C5 |
H5 |
171.8 |
180.4 |
C3 |
C4 |
C5 |
O4 |
234.3 |
244.6 |
C5 |
C4 |
C3 |
H3 |
6.9 |
24.2 |
C3 |
C4 |
C5 |
H4 |
116.2 |
122.3 |
O4 |
C4 |
C5 |
H4 |
241.9 |
237.7 |
O5 |
C5 |
C4 |
C6 |
121.3 |
120.0 |
O5 |
C5 |
C4 |
H5 |
235.8 |
240.0 |
C4 |
C5 |
O5 |
HO5 |
234.1 |
300.0 |
C4 |
C5 |
C6 |
O6B |
295.9 |
295.0 |
C4 |
C5 |
C6 |
O6A |
114.2 |
115.0 |
C6 |
C5 |
C4 |
H5 |
114.4 |
120.0 |
C4 |
C5 |
O5 |
C6 |
231.6 |
240.0 |
O5 |
C5 |
C4 |
H4 |
165.7 |
182.7 |
C4 |
C5 |
O5 |
H5 |
116.4 |
120.0 |
O5 |
C5 |
C6 |
O6B |
175.5 |
175.0 |
O5 |
C5 |
C6 |
O6A |
353.8 |
355.0 |
C6 |
C5 |
O5 |
H5 |
244.8 |
240.0 |
C4 |
C5 |
C6 |
O5 |
120.4 |
120.0 |
C6 |
C5 |
C4 |
H4 |
44.4 |
62.7 |
C4 |
C5 |
C6 |
H5 |
244.5 |
239.9 |
O5 |
C5 |
C6 |
H5 |
124.1 |
119.9 |
C6 |
C5 |
O5 |
HO5 |
2.6 |
60.0 |
O6B |
C6 |
C5 |
O6A |
181.7 |
180.0 |
C5 |
C6 |
O6B |
HO6B |
178.4 |
180.0 |
C5 |
C6 |
O6B |
O6A |
178.4 |
180.0 |
O6B |
C6 |
C5 |
H5 |
51.4 |
55.0 |
C5 |
C6 |
O6A |
O6B |
181.8 |
180.0 |
O6A |
C6 |
C5 |
H5 |
229.7 |
235.0 |
O6A |
C6 |
O6B |
HO6B |
0.0 |
360.0 |
O1 |
C1 |
H1 |
C2 |
122.9 |
122.2 |
O1 |
C1 |
H1 |
O4 |
242.5 |
237.7 |
H1 |
C1 |
O1 |
HO1 |
61.9 |
57.8 |
C2 |
C1 |
H1 |
O4 |
119.5 |
115.5 |
H1 |
C1 |
C2 |
O2 |
318.3 |
335.7 |
H1 |
C1 |
C2 |
C3 |
207.2 |
217.0 |
H1 |
C1 |
C2 |
H2 |
81.6 |
98.3 |
H1 |
C1 |
O4 |
C4 |
150.2 |
159.4 |
HO1 |
O1 |
C1 |
C2 |
180.0 |
180.0 |
HO1 |
O1 |
C1 |
O4 |
298.6 |
295.4 |
HO1 |
O1 |
C1 |
H1 |
61.9 |
57.8 |
H2 |
C2 |
C1 |
O4 |
204.9 |
217.3 |
C1 |
C2 |
H2 |
O2 |
238.0 |
237.4 |
C1 |
C2 |
H2 |
C3 |
117.8 |
114.7 |
H2 |
C2 |
C1 |
H1 |
81.6 |
98.3 |
O2 |
C2 |
H2 |
C3 |
239.8 |
237.3 |
H2 |
C2 |
O2 |
HO2 |
54.8 |
298.8 |
H2 |
C2 |
C3 |
O3 |
25.4 |
0.1 |
H2 |
C2 |
C3 |
C4 |
140.0 |
118.7 |
H2 |
C2 |
C3 |
H3 |
263.3 |
237.5 |
HO2 |
O2 |
C2 |
C3 |
288.5 |
176.1 |
HO2 |
O2 |
C2 |
H2 |
54.8 |
298.8 |
C2 |
C3 |
H3 |
O3 |
120.4 |
122.6 |
C2 |
C3 |
H3 |
C4 |
241.2 |
245.3 |
H3 |
C3 |
C2 |
H2 |
263.3 |
237.5 |
O3 |
C3 |
H3 |
C4 |
120.8 |
122.7 |
H3 |
C3 |
O3 |
HO3 |
303.9 |
61.1 |
H3 |
C3 |
C4 |
O4 |
238.4 |
265.3 |
H3 |
C3 |
C4 |
C5 |
6.9 |
24.2 |
H3 |
C3 |
C4 |
H4 |
119.5 |
146.5 |
HO3 |
O3 |
C3 |
C4 |
67.6 |
183.9 |
HO3 |
O3 |
C3 |
H3 |
303.9 |
61.1 |
C3 |
C4 |
H4 |
O4 |
117.5 |
115.4 |
C3 |
C4 |
H4 |
C5 |
238.1 |
237.7 |
H4 |
C4 |
C3 |
H3 |
119.5 |
146.5 |
O4 |
C4 |
H4 |
C5 |
120.5 |
122.3 |
H4 |
C4 |
C5 |
O5 |
165.7 |
182.7 |
H4 |
C4 |
C5 |
C6 |
44.4 |
62.7 |
H4 |
C4 |
C5 |
H5 |
290.0 |
302.6 |
C4 |
C5 |
H5 |
O5 |
243.1 |
240.0 |
C4 |
C5 |
H5 |
C6 |
125.3 |
120.0 |
H5 |
C5 |
C4 |
H4 |
290.0 |
302.6 |
O5 |
C5 |
H5 |
C6 |
242.2 |
240.0 |
H5 |
C5 |
O5 |
HO5 |
117.8 |
180.0 |
H5 |
C5 |
C6 |
O6B |
51.4 |
55.0 |
H5 |
C5 |
C6 |
O6A |
229.7 |
235.0 |
HO5 |
O5 |
C5 |
C6 |
2.6 |
60.0 |
HO5 |
O5 |
C5 |
H5 |
117.8 |
180.0 |
HO6B |
O6B |
C6 |
O6A |
0.0 |
360.0 |