PDB Chemical Component GSP

Ideal Model

Chemical Description

Name 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
Formula C10 H16 N5 O13 P3 S
Formal charge 0
Molecular weight 539.246 g/mol
Component type NON-POLYMER

Chemical features

Atom count 48
Chiral atom count 6
Chiral atoms PB PA C4' C3' C2' C1'
Bond count 50
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 5'-O-[(S)-hydroxy{[(S)-hydroxy(thiophosphonooxy)phosphoryl]oxy}phosphoryl]guanosine
Systematic name (OpenEye OEToolkits) [[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] dihydroxyphosphinothioyl hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=S)[C@@H](O)[C@H]3O
SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[CH](O)[CH]3O
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)OP(=S)(O)O)O)O)N=C(NC2=O)N
InChI descriptor InChI=1S/C10H16N5O13P3S/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(26-9)1-25-29(19,20)27-30(21,22)28-31(23,24)32/h2-3,5-6,9,16-17H,1H2,(H,19,20)(H,21,22)(H2,23,24,32)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKey descriptor XOFLBQFBSOEHOG-UUOKFMHZSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1GIA
Processing site EBI