PDB Chemical Component GSE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GSE

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O11	1.452	1.428
C1	C2	1.531	1.529
C1	H11	1.115	1.091
C1	H12A	1.115	1.089
O11	P	1.522	1.609
O12	P	1.551	1.608
O12	C11	1.503	1.428
C2	C3	1.537	1.529
C2	O21	1.440	1.429
C2	H21	1.115	1.089
C3	O31	1.428	1.429
C3	H31	1.115	1.091
C3	H32	1.115	1.090
O31	HO1	0.950	0.967
P	O14	1.485	1.610
P	O13	1.448	1.480
O14	HO4	0.951	0.967
O21	HO2	0.949	0.966
C11	CA	1.551	1.530
C11	H111	1.115	1.090
C11	H112	1.114	1.089
CA	N	1.411	1.469
CA	C	1.574	1.507
CA	HA	1.115	1.090
N	H2	1.019	1.009
N	H	1.020	1.008
C	OXT	1.244	1.342
C	O	1.208	1.207
OXT	HXT	0.950	0.966

Bond Angles for GSE

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O11	C1	C2	106.0	109.6
O11	C1	H11	113.5	109.4
O11	C1	H12A	113.5	109.5
C1	O11	P	131.5	106.9
C2	C1	H11	113.5	109.4
C2	C1	H12A	113.6	109.5
C1	C2	C3	114.6	109.6
C1	C2	O21	107.9	109.4
C1	C2	H21	106.6	109.5
H11	C1	H12A	96.9	109.4
O11	P	O12	99.2	109.5
O11	P	O14	111.7	109.5
O11	P	O13	115.0	109.4
P	O12	C11	118.2	106.8
O12	P	O14	110.4	109.5
O12	P	O13	114.5	109.5
O12	C11	CA	117.6	109.5
O12	C11	H111	109.2	109.5
O12	C11	H112	109.2	109.5
C3	C2	O21	108.0	109.4
C3	C2	H21	106.5	109.6
C2	C3	O31	112.1	109.5
C2	C3	H31	111.2	109.4
C2	C3	H32	111.2	109.5
O21	C2	H21	113.4	109.4
C2	O21	HO2	107.9	106.9
O31	C3	H31	111.3	109.5
O31	C3	H32	111.2	109.5
C3	O31	HO1	112.1	106.8
H31	C3	H32	99.1	109.5
O14	P	O13	106.0	109.4
P	O14	HO4	111.7	106.7
CA	C11	H111	109.3	109.4
CA	C11	H112	109.3	109.5
C11	CA	N	93.7	109.4
C11	CA	C	119.6	109.5
C11	CA	HA	124.3	109.5
H111	C11	H112	100.9	109.4
N	CA	C	129.3	109.4
N	CA	HA	112.6	109.4
CA	N	H2	93.7	106.7
CA	N	H	118.4	106.7
C	CA	HA	80.6	109.5
CA	C	OXT	128.2	120.0
CA	C	O	121.1	120.0
H2	N	H	118.4	106.7
OXT	C	O	110.4	120.0
C	OXT	HXT	128.2	120.0

Torsion Angles for GSE

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O11	H11	234.7	240.0
C2	C1	O11	H12A	125.3	120.2
O11	C1	C2	C3	277.3	180.0
O11	C1	C2	O21	37.7	299.9
O11	C1	C2	H21	159.7	59.8
H11	C1	O11	H12A	250.6	240.1
C1	O11	P	O12	168.1	180.0
C1	O11	P	O14	284.5	300.1
C1	O11	P	O13	45.4	60.0
O11	C1	C2	H11	125.3	119.9
O11	C1	C2	H12A	234.7	239.9
C2	C1	O11	P	189.4	180.0
H11	C1	C2	H12A	109.4	119.9
C3	C2	C1	O21	239.7	240.1
C3	C2	C1	H21	117.6	120.2
C1	C2	C3	O31	65.0	180.0
C1	C2	C3	H31	190.3	299.9
C1	C2	C3	H32	299.8	59.9
O21	C2	C1	H21	237.9	240.1
C1	C2	O21	HO2	180.0	300.0
O11	C1	H11	C2	238.9	240.0
O11	C1	H11	H12A	119.4	120.0
H11	C1	O11	P	314.7	300.0
C2	C1	H11	H12A	240.5	240.0
H11	C1	C2	C3	152.1	60.1
H11	C1	C2	O21	272.4	180.0
H11	C1	C2	H21	34.5	299.9
O11	C1	H12A	C2	121.1	120.2
O11	C1	H12A	H11	240.6	240.1
H12A	C1	O11	P	64.1	59.9
C2	C1	H12A	H11	119.4	119.9
H12A	C1	C2	C3	42.6	300.1
H12A	C1	C2	O21	163.0	60.1
H12A	C1	C2	H21	285.0	180.0
P	O11	C1	C2	189.4	180.0
P	O11	C1	H11	314.7	300.0
P	O11	C1	H12A	64.1	59.9
O11	P	O12	C11	353.4	180.0
O12	P	O11	O14	243.6	239.9
O12	P	O11	O13	122.7	120.0
O14	P	O11	O13	239.1	240.1
O11	P	O14	HO4	180.0	300.0
O11	P	O12	O14	117.4	120.1
O11	P	O12	O13	237.0	240.0
P	O12	C11	CA	153.1	180.0
P	O12	C11	H111	278.3	60.0
P	O12	C11	H112	27.8	300.1
O14	P	O12	O13	119.6	120.0
O12	P	O14	HO4	289.4	60.1
C11	O12	P	O14	236.0	60.0
C11	O12	P	O13	116.4	300.0
CA	C11	O12	H111	234.7	120.0
CA	C11	O12	H112	125.3	240.0
O12	C11	CA	N	34.0	300.0
O12	C11	CA	C	253.9	180.0
O12	C11	CA	HA	154.7	60.0
H111	C11	O12	H112	250.5	119.9
C3	C2	C1	H11	152.1	60.1
C3	C2	C1	H12A	42.6	300.1
C1	C2	C3	O21	120.3	119.9
C1	C2	C3	H21	242.4	239.9
O21	C2	C3	H21	122.1	120.0
C3	C2	O21	HO2	304.3	60.0
O31	C3	C2	H31	234.7	240.0
O31	C3	C2	H32	125.2	120.0
C2	C3	O31	HO1	180.1	180.0
H31	C3	C2	H32	250.5	240.0
O21	C2	C1	H11	272.4	180.0
O21	C2	C1	H12A	163.0	60.1
C1	C2	O21	C3	235.6	240.0
C1	C2	O21	H21	117.8	119.9
C3	C2	O21	H21	242.2	240.0
O21	C2	C3	O31	304.7	60.0
O21	C2	C3	H31	70.0	180.0
O21	C2	C3	H32	179.5	300.0
H21	C2	C1	H11	34.5	299.9
H21	C2	C1	H12A	285.0	180.0
C1	C2	H21	C3	122.8	120.2
C1	C2	H21	O21	241.4	240.1
C3	C2	H21	O21	118.7	120.0
H21	C2	C3	O31	182.6	300.1
H21	C2	C3	H31	307.9	60.1
H21	C2	C3	H32	57.4	180.0
H21	C2	O21	HO2	62.2	180.0
O31	C3	C2	O21	304.7	60.0
O31	C3	C2	H21	182.6	300.1
C2	C3	O31	H31	125.2	119.9
C2	C3	O31	H32	234.8	239.9
H31	C3	O31	H32	109.5	120.0
H31	C3	C2	O21	70.0	180.0
H31	C3	C2	H21	307.9	60.1
C2	C3	H31	O31	234.3	240.0
C2	C3	H31	H32	117.1	120.0
O31	C3	H31	H32	242.8	240.0
H31	C3	O31	HO1	54.8	60.0
H32	C3	C2	O21	179.5	300.0
H32	C3	C2	H21	57.4	180.0
C2	C3	H32	O31	125.7	120.1
C2	C3	H32	H31	242.9	240.1
O31	C3	H32	H31	117.2	120.0
H32	C3	O31	HO1	305.3	300.1
HO1	O31	C3	H31	54.8	60.0
HO1	O31	C3	H32	305.3	300.1
O11	P	O14	O12	250.6	239.9
O11	P	O14	O13	126.0	119.9
O14	P	O12	C11	236.0	60.0
O12	P	O14	O13	235.4	240.0
O11	P	O13	O12	114.1	120.0
O11	P	O13	O14	236.1	240.0
O13	P	O12	C11	116.4	300.0
O12	P	O13	O14	122.0	120.0
O13	P	O14	HO4	54.0	180.0
HO4	O14	P	O13	54.0	180.0
HO2	O21	C2	H21	62.2	180.0
O12	C11	CA	H111	125.2	239.9
O12	C11	CA	H112	234.8	120.0
H111	C11	CA	H112	109.5	240.1
N	CA	C11	C	140.1	120.0
N	CA	C11	HA	239.4	240.1
C11	CA	N	H2	180.0	300.0
C11	CA	N	H	54.7	53.7
C	CA	C11	HA	99.2	120.1
C11	CA	C	OXT	128.8	270.0
C11	CA	C	O	301.3	89.9
O12	C11	H111	CA	230.1	120.1
O12	C11	H111	H112	115.0	240.0
CA	C11	H111	H112	244.9	119.9
H111	C11	CA	N	268.8	60.1
H111	C11	CA	C	128.7	300.1
H111	C11	CA	HA	29.5	180.0
O12	C11	H112	CA	130.0	239.9
O12	C11	H112	H111	245.0	120.0
CA	C11	H112	H111	115.1	240.1
H112	C11	CA	N	159.3	180.0
H112	C11	CA	C	19.2	60.0
H112	C11	CA	HA	279.9	299.9
N	CA	C11	H111	268.8	60.1
N	CA	C11	H112	159.3	180.0
C11	CA	N	C	226.1	240.0
C11	CA	N	HA	129.6	120.0
C	CA	N	HA	263.5	240.0
N	CA	C	OXT	4.6	150.0
N	CA	C	O	177.1	330.0
H2	N	CA	H	125.3	246.3
C	CA	C11	H111	128.7	300.1
C	CA	C11	H112	19.2	60.0
C11	CA	C	N	124.2	120.0
C11	CA	C	HA	235.8	239.9
N	CA	C	HA	111.6	120.0
C	CA	N	H2	313.9	60.0
C	CA	N	H	188.6	173.8
OXT	C	CA	O	187.5	180.1
CA	C	OXT	HXT	180.0	180.0
HA	CA	C11	H111	29.5	180.0
HA	CA	C11	H112	279.9	299.9
C11	CA	HA	N	248.4	240.1
C11	CA	HA	C	119.6	120.1
N	CA	HA	C	231.2	240.0
HA	CA	N	H2	50.4	180.0
HA	CA	N	H	285.1	293.8
HA	CA	C	OXT	253.0	30.1
HA	CA	C	O	65.5	210.0
H2	N	CA	C	313.9	60.0
H2	N	CA	HA	50.4	180.0
CA	N	H2	H	234.7	113.8
H	N	CA	C	188.6	173.8
H	N	CA	HA	285.1	293.8
CA	N	H	H2	112.1	246.2
OXT	C	CA	HA	253.0	30.1
CA	C	OXT	O	173.2	179.9
O	C	CA	HA	65.5	210.0
CA	C	O	OXT	186.3	180.1
O	C	OXT	HXT	6.8	0.0
HXT	OXT	C	O	6.8	0.0