PDB Chemical Component GRE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GRE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1A |
O1A |
1.221 |
1.233 |
C1A |
O2A |
1.226 |
1.359 |
C1A |
C1 |
1.434 |
1.459 |
O2A |
HO2A |
0.950 |
0.981 |
C1 |
C2 |
1.424 |
1.395 |
C1 |
C6 |
1.438 |
1.395 |
C2 |
C3 |
1.431 |
1.395 |
C2 |
O2 |
1.358 |
1.363 |
C3 |
C4 |
1.406 |
1.394 |
C3 |
H3 |
1.080 |
1.088 |
C4 |
C5 |
1.413 |
1.395 |
C4 |
H4 |
1.080 |
1.086 |
C5 |
C6 |
1.437 |
1.395 |
C5 |
H5 |
1.080 |
1.087 |
C6 |
O6 |
1.336 |
1.362 |
O2 |
HO2 |
0.950 |
0.970 |
O6 |
HO6 |
0.950 |
0.969 |
Bond Angles for GRE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1A |
C1A |
O2A |
114.3 |
122.5 |
O1A |
C1A |
C1 |
123.2 |
125.3 |
O2A |
C1A |
C1 |
122.5 |
112.3 |
C1A |
O2A |
HO2A |
109.5 |
112.9 |
C1A |
C1 |
C2 |
123.2 |
120.0 |
C1A |
C1 |
C6 |
121.0 |
120.0 |
C2 |
C1 |
C6 |
115.8 |
120.0 |
C1 |
C2 |
C3 |
123.6 |
120.0 |
C1 |
C2 |
O2 |
121.8 |
121.0 |
C1 |
C6 |
C5 |
122.1 |
120.0 |
C1 |
C6 |
O6 |
121.9 |
121.1 |
C3 |
C2 |
O2 |
114.6 |
119.1 |
C2 |
C3 |
C4 |
118.1 |
120.0 |
C2 |
C3 |
H3 |
120.9 |
120.3 |
C2 |
O2 |
HO2 |
109.5 |
110.2 |
C4 |
C3 |
H3 |
120.9 |
119.6 |
C3 |
C4 |
C5 |
121.6 |
120.0 |
C3 |
C4 |
H4 |
119.2 |
120.0 |
C5 |
C4 |
H4 |
119.2 |
120.0 |
C4 |
C5 |
C6 |
118.8 |
120.0 |
C4 |
C5 |
H5 |
120.6 |
119.6 |
C6 |
C5 |
H5 |
120.6 |
120.4 |
C5 |
C6 |
O6 |
116.0 |
119.0 |
C6 |
O6 |
HO6 |
109.5 |
110.2 |
Torsion Angles for GRE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2A |
C1A |
O1A |
C1 |
180.1 |
180.1 |
O1A |
C1A |
O2A |
HO2A |
360.0 |
360.0 |
O1A |
C1A |
C1 |
C2 |
0.1 |
90.0 |
O1A |
C1A |
C1 |
C6 |
180.2 |
269.9 |
O1A |
C1A |
O2A |
C1 |
179.9 |
180.0 |
O2A |
C1A |
C1 |
C2 |
180.0 |
270.0 |
O2A |
C1A |
C1 |
C6 |
0.0 |
89.9 |
O1A |
C1A |
C1 |
O2A |
180.2 |
180.1 |
C1 |
C1A |
O2A |
HO2A |
180.1 |
180.0 |
C2 |
C1 |
C1A |
C6 |
180.0 |
180.1 |
C1A |
C1 |
C2 |
C3 |
180.1 |
180.0 |
C1A |
C1 |
C2 |
O2 |
0.2 |
359.9 |
C1A |
C1 |
C6 |
C5 |
179.9 |
180.0 |
C1A |
C1 |
C6 |
O6 |
359.8 |
0.1 |
HO2A |
O2A |
C1A |
C1 |
180.1 |
180.0 |
C1A |
C1 |
C2 |
C6 |
180.0 |
179.9 |
C2 |
C1 |
C6 |
C5 |
359.9 |
360.0 |
C2 |
C1 |
C6 |
O6 |
179.8 |
180.0 |
C3 |
C2 |
C1 |
O2 |
179.9 |
180.0 |
C1 |
C2 |
C3 |
C4 |
360.0 |
360.0 |
C1 |
C2 |
C3 |
H3 |
180.0 |
180.1 |
C1 |
C2 |
O2 |
HO2 |
86.9 |
5.8 |
C1A |
C1 |
C6 |
C2 |
180.0 |
180.1 |
C6 |
C1 |
C2 |
C3 |
0.1 |
0.0 |
C6 |
C1 |
C2 |
O2 |
180.2 |
180.0 |
C4 |
C5 |
C6 |
C1 |
0.0 |
0.0 |
C1 |
C6 |
C5 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
O6 |
180.1 |
180.0 |
C1 |
C6 |
O6 |
HO6 |
253.9 |
167.5 |
C3 |
C2 |
C1 |
C6 |
0.1 |
0.0 |
C1 |
C2 |
C3 |
O2 |
180.1 |
180.0 |
C3 |
C2 |
O2 |
HO2 |
267.0 |
185.8 |
C4 |
C3 |
C2 |
H3 |
180.0 |
179.9 |
C2 |
C3 |
C4 |
C5 |
359.9 |
0.0 |
C2 |
C3 |
C4 |
H4 |
179.9 |
180.0 |
O2 |
C2 |
C1 |
C6 |
180.2 |
180.0 |
C1 |
C2 |
O2 |
C3 |
179.9 |
180.0 |
O2 |
C2 |
C3 |
C4 |
179.9 |
180.0 |
O2 |
C2 |
C3 |
H3 |
359.9 |
0.1 |
C4 |
C3 |
C2 |
O2 |
179.9 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.1 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.1 |
360.0 |
C3 |
C4 |
C5 |
H5 |
180.1 |
180.0 |
H3 |
C3 |
C2 |
O2 |
359.9 |
0.1 |
C2 |
C3 |
H3 |
C4 |
180.0 |
179.9 |
H3 |
C3 |
C4 |
C5 |
179.9 |
179.9 |
H3 |
C3 |
C4 |
H4 |
359.9 |
360.0 |
C1 |
C6 |
C5 |
C4 |
0.0 |
0.0 |
C5 |
C4 |
C3 |
H3 |
179.9 |
179.9 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
O6 |
180.1 |
180.0 |
H4 |
C4 |
C3 |
H3 |
359.9 |
360.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
C6 |
180.1 |
180.0 |
H4 |
C4 |
C5 |
H5 |
0.1 |
0.0 |
C1 |
C6 |
C5 |
O6 |
179.9 |
180.0 |
C6 |
C5 |
C4 |
H4 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.1 |
C5 |
C6 |
O6 |
HO6 |
73.8 |
347.5 |
H5 |
C5 |
C4 |
H4 |
0.1 |
0.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.9 |
H5 |
C5 |
C6 |
O6 |
0.1 |
359.9 |
C1 |
C6 |
O6 |
C5 |
180.1 |
180.0 |
O6 |
C6 |
C5 |
H5 |
0.1 |
359.9 |