PDB Chemical Component GRB

Ideal Model

Chemical Description

Name 8-bromoguanosine 5'-(dihydrogen phosphate)
Formula C10 H13 Br N5 O8 P
Formal charge 0
Molecular weight 442.117 g/mol
Component type RNA LINKING
Nonstandard Parent Id G

Chemical features

Atom count 38
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Observed leaving atoms OP3 HOP3
Bond count 40
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 8-bromoguanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(2-azanyl-8-bromo-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n([C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O)c(Br)nc2C(=O)N1
SMILES (CACTVS) NC1=Nc2n([CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O)c(Br)nc2C(=O)N1
Stereo SMILES (OpenEye) C([C@@H]1[C@H]([C@H]([C@@H](O1)n2c3c(nc2Br)C(=O)NC(=N3)N)O)O)OP(=O)(O)O
InChI descriptor InChI=1S/C10H13BrN5O8P/c11-9-13-3-6(14-10(12)15-7(3)19)16(9)8-5(18)4(17)2(24-8)1-23-25(20,21)22/h2,4-5,8,17-18H,1H2,(H2,20,21,22)(H3,12,14,15,19)/t2-,4-,5-,8-/m1/s1
InChIKey descriptor SJLDUTNIPDQOCZ-UMMCILCDSA-N

Status Information

Last modified 2011-06-04
Created 2011-03-15
Release status REL
Model PDB code 3R1D
Processing site RCSB