PDB Chemical Component GR9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GR9

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N2	1.478	1.469
C1	C6	1.531	1.532
N2	C3	1.474	1.469
N2	C4	1.485	1.469
C4	C5	1.545	1.532
C5	N6	1.482	1.471
N6	S7	1.669	1.656
N6	C6	1.492	1.471
S7	O8	1.426	1.421
S7	O9	1.427	1.420
S7	C10	1.784	1.762
C10	C11	1.404	1.383
C10	C15	1.398	1.383
C11	C12	1.381	1.380
C12	C13	1.410	1.393
C13	C14	1.400	1.393
C13	C16	1.485	1.483
C14	C15	1.382	1.380
C16	C17	1.410	1.400
C16	N21	1.338	1.325
C17	N18	1.331	1.319
N18	C19	1.340	1.329
C19	C20	1.423	1.405
C19	N31	1.377	1.382
C20	N21	1.337	1.329
C20	C22	1.480	1.477
C22	O23	1.209	1.216
C22	N24	1.355	1.347
N24	C25	1.407	1.399
C25	C26	1.405	1.393
C25	C30	1.406	1.389
C26	C27	1.398	1.384
C27	C28	1.387	1.382
C28	N29	1.327	1.319
N29	C30	1.334	1.318
C1	H11C	1.100	1.090
C1	H12C	1.100	1.090
C6	H61C	1.101	1.090
C6	H62C	1.100	1.090
C3	H31C	1.100	1.090
C3	H32C	1.100	1.089
C3	H33C	1.100	1.090
C4	H41C	1.100	1.090
C4	H42C	1.100	1.090
C5	H51C	1.100	1.090
C5	H52C	1.100	1.090
C11	H11	1.080	1.080
C15	H15	1.080	1.080
C12	H12	1.080	1.080
C14	H14	1.080	1.080
C17	H17	1.080	1.080
N31	H311	1.000	0.970
N31	H312	1.000	0.971
N24	H24	1.000	0.970
C26	H26	1.080	1.080
C30	H30	1.080	1.080
C27	H27	1.080	1.080
C28	H28	1.080	1.080

Bond Angles for GR9

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N2	C1	C6	110.4	109.3
C1	N2	C3	109.5	111.0
C1	N2	C4	115.2	111.3
N2	C1	H11C	109.2	109.5
N2	C1	H12C	109.2	109.5
C1	C6	N6	110.7	108.5
C6	C1	H11C	109.3	109.5
C6	C1	H12C	109.2	109.5
C1	C6	H61C	109.1	109.6
C1	C6	H62C	109.2	109.7
C3	N2	C4	110.4	111.0
N2	C3	H31C	109.5	109.4
N2	C3	H32C	109.4	109.5
N2	C3	H33C	109.4	109.5
N2	C4	C5	112.6	109.3
N2	C4	H41C	108.7	109.5
N2	C4	H42C	108.7	109.4
C4	C5	N6	109.3	108.6
C5	C4	H41C	108.7	109.5
C5	C4	H42C	108.7	109.5
C4	C5	H51C	109.5	109.6
C4	C5	H52C	109.5	109.6
C5	N6	S7	121.4	120.9
C5	N6	C6	119.3	118.2
N6	C5	H51C	109.5	109.6
N6	C5	H52C	109.5	109.6
S7	N6	C6	119.3	120.9
N6	S7	O8	109.0	106.4
N6	S7	O9	107.2	106.4
N6	S7	C10	104.5	107.2
N6	C6	H61C	109.2	109.6
N6	C6	H62C	109.2	109.6
O8	S7	O9	121.2	123.2
O8	S7	C10	106.5	106.4
O9	S7	C10	107.3	106.4
S7	C10	C11	120.9	119.9
S7	C10	C15	119.4	119.9
C11	C10	C15	119.7	120.3
C10	C11	C12	120.3	120.1
C10	C11	H11	119.9	120.0
C10	C15	C14	120.8	120.1
C10	C15	H15	119.6	120.0
C11	C12	C13	119.4	119.9
C12	C11	H11	119.9	120.0
C11	C12	H12	120.3	120.1
C12	C13	C14	120.6	119.7
C12	C13	C16	120.0	120.2
C13	C12	H12	120.3	120.0
C14	C13	C16	119.3	120.1
C13	C14	C15	119.2	119.9
C13	C14	H14	120.4	120.1
C13	C16	C17	121.7	119.9
C13	C16	N21	118.7	120.0
C14	C15	H15	119.6	120.0
C15	C14	H14	120.4	120.0
C17	C16	N21	119.6	120.1
C16	C17	N18	118.6	120.2
C16	C17	H17	120.7	119.9
C16	N21	C20	122.1	119.9
C17	N18	C19	122.2	120.1
N18	C17	H17	120.7	119.9
N18	C19	C20	119.1	119.8
N18	C19	N31	118.4	120.1
C20	C19	N31	122.4	120.1
C19	C20	N21	118.2	119.8
C19	C20	C22	124.7	120.1
C19	N31	H311	109.5	120.1
C19	N31	H312	109.4	119.9
N21	C20	C22	117.1	120.1
C20	C22	O23	120.1	120.0
C20	C22	N24	117.1	120.0
O23	C22	N24	122.7	120.0
C22	N24	C25	130.9	120.0
C22	N24	H24	114.6	120.0
N24	C25	C26	116.8	120.5
N24	C25	C30	125.5	120.4
C25	N24	H24	114.6	120.0
C26	C25	C30	117.6	119.0
C25	C26	C27	119.8	118.4
C25	C26	H26	120.1	120.8
C25	C30	N29	120.6	120.6
C25	C30	H30	119.7	119.7
C26	C27	C28	118.9	119.2
C27	C26	H26	120.1	120.8
C26	C27	H27	120.6	120.4
C27	C28	N29	120.5	120.9
C28	C27	H27	120.6	120.4
C27	C28	H28	119.7	119.5
C28	N29	C30	122.6	121.8
N29	C28	H28	119.8	119.5
N29	C30	H30	119.7	119.6
H11C	C1	H12C	109.5	109.5
H61C	C6	H62C	109.5	109.8
H31C	C3	H32C	109.5	109.5
H31C	C3	H33C	109.4	109.5
H32C	C3	H33C	109.5	109.5
H41C	C4	H42C	109.5	109.6
H51C	C5	H52C	109.5	109.7
H311	N31	H312	109.5	120.0

Torsion Angles for GR9

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N2	C1	C6	N6	49.5	53.8
C6	C1	N2	H11C	239.8	240.0
C6	C1	N2	H12C	120.1	120.0
N2	C1	C6	H61C	169.7	173.5
N2	C1	C6	H62C	289.3	294.1
C3	N2	C1	C4	234.9	235.8
C1	N2	C3	H31C	180.0	60.0
C1	N2	C3	H32C	300.0	180.0
C1	N2	C3	H33C	60.0	300.1
C1	N2	C4	C5	54.4	63.1
C1	N2	C4	H41C	174.8	183.1
C1	N2	C4	H42C	293.9	303.1
H11C	C1	N2	H12C	240.3	239.9
C6	C1	N2	C3	179.8	172.7
C6	C1	N2	C4	304.9	296.9
N2	C1	C6	H11C	120.1	119.9
N2	C1	C6	H12C	239.9	240.1
C5	N6	C6	C1	310.7	308.8
S7	N6	C6	C1	131.7	128.8
N6	C6	C1	H61C	239.8	240.3
N6	C6	C1	H62C	120.2	119.7
H11C	C1	C6	H12C	119.7	120.1
H61C	C6	C1	H62C	240.4	239.4
C3	N2	C1	C6	179.8	172.7
C1	N2	C3	C4	127.8	124.4
C3	N2	C1	H11C	300.0	292.7
C3	N2	C1	H12C	59.7	52.7
C3	N2	C4	C5	179.0	187.3
C3	N2	C4	H41C	299.5	307.3
C3	N2	C4	H42C	58.5	67.3
H31C	C3	N2	H32C	240.0	240.1
H31C	C3	N2	H33C	120.0	120.0
H32C	C3	N2	H33C	240.0	239.9
C4	N2	C1	C6	304.9	296.9
C1	N2	C4	C3	235.4	235.8
C4	N2	C1	H11C	65.1	56.9
C4	N2	C1	H12C	184.8	177.0
C4	N2	C3	H31C	52.2	295.7
C4	N2	C3	H32C	172.2	55.6
C4	N2	C3	H33C	292.2	175.7
N2	C4	C5	N6	313.4	306.2
C5	C4	N2	H41C	239.5	240.0
C5	C4	N2	H42C	120.5	120.0
N2	C4	C5	H51C	73.3	65.9
N2	C4	C5	H52C	193.4	186.5
H41C	C4	N2	H42C	240.9	239.9
N2	C4	C5	H41C	120.5	119.9
N2	C4	C5	H42C	239.5	240.1
C4	C5	N6	S7	225.9	231.2
C4	C5	N6	C6	46.9	51.2
N6	C5	C4	H51C	240.0	240.2
N6	C5	C4	H52C	120.0	119.7
H41C	C4	C5	H42C	119.1	120.2
H51C	C5	C4	H52C	239.9	239.5
C1	C6	N6	C5	310.7	308.8
N6	C5	C4	H41C	192.9	186.3
N6	C5	C4	H42C	73.8	66.1
C4	C5	N6	H51C	120.0	119.8
C4	C5	N6	H52C	240.0	240.3
S7	N6	C5	C6	179.0	180.1
C5	N6	S7	O8	331.1	203.5
C5	N6	S7	O9	198.3	336.5
C5	N6	S7	C10	84.6	90.0
C5	N6	C6	H61C	190.5	189.1
C5	N6	C6	H62C	70.9	68.6
H51C	C5	N6	H52C	120.1	120.6
C1	C6	N6	S7	131.7	128.8
C5	N6	S7	C6	181.0	179.9
S7	N6	C5	H51C	105.9	111.5
S7	N6	C5	H52C	345.9	350.9
S7	N6	C6	H61C	11.5	9.0
S7	N6	C6	H62C	251.9	248.5
O8	S7	N6	O9	132.8	227.1
O8	S7	N6	C10	246.5	113.5
O9	S7	N6	C10	113.7	246.5
N6	S7	C10	C11	104.1	90.0
N6	S7	C10	C15	285.5	269.8
N6	C6	C1	H11C	289.4	293.9
N6	C6	C1	H12C	169.6	173.8
C1	C6	N6	H61C	120.2	119.7
C1	C6	N6	H62C	239.8	240.2
C5	N6	C6	S7	179.0	180.1
C6	N6	C5	H51C	287.0	291.4
C6	N6	C5	H52C	166.9	170.9
C6	N6	S7	O8	150.1	23.6
C6	N6	S7	O9	17.3	156.5
C6	N6	S7	C10	263.6	270.0
H61C	C6	N6	H62C	119.6	120.5
O8	S7	N6	C6	150.1	23.6
N6	S7	O8	O9	235.0	122.9
N6	S7	O8	C10	112.2	245.9
O9	S7	O8	C10	237.3	123.0
O8	S7	C10	C11	219.5	336.4
O8	S7	C10	C15	40.8	156.2
O9	S7	N6	C6	17.3	156.5
N6	S7	O9	O8	125.9	237.1
N6	S7	O9	C10	248.2	114.1
O8	S7	O9	C10	122.4	237.0
O9	S7	C10	C11	350.5	203.5
O9	S7	C10	C15	171.9	23.3
C10	S7	N6	C6	263.6	270.0
N6	S7	C10	O8	244.7	113.5
N6	S7	C10	O9	113.6	246.5
O8	S7	C10	O9	228.9	133.0
C11	C10	S7	C15	178.6	180.2
S7	C10	C11	C12	180.2	180.0
S7	C10	C11	H11	0.1	0.0
S7	C10	C15	C14	180.4	179.8
S7	C10	C15	H15	0.4	359.9
S7	C10	C11	C15	181.4	179.8
C11	C10	C15	C14	1.8	359.6
C11	C10	C15	H15	181.8	179.7
C10	C11	C12	C13	2.2	0.0
C12	C11	C10	H11	180.0	180.0
C10	C11	C12	H12	182.2	180.0
S7	C10	C15	C11	178.6	180.2
C15	C10	C11	C12	358.8	0.2
C15	C10	C11	H11	178.8	180.2
C13	C14	C15	C10	356.7	0.4
C14	C15	C10	H15	180.0	179.8
C10	C15	C14	H14	176.7	180.3
C12	C11	C10	C15	358.8	0.2
C10	C11	C12	H11	180.0	180.0
C11	C12	C13	C14	356.2	359.9
C11	C12	C13	C16	180.6	180.0
C13	C12	C11	H12	180.0	180.1
C13	C12	C11	H11	182.2	180.0
C11	C12	C13	H12	180.0	179.9
C14	C13	C12	C16	175.6	180.0
C12	C13	C14	C15	4.4	359.8
C12	C13	C14	H14	184.4	180.0
C12	C13	C16	C17	202.3	5.0
C12	C13	C16	N21	22.4	184.7
C10	C15	C14	C13	356.7	0.4
C12	C13	C14	C16	184.4	180.0
C14	C13	C12	H12	176.2	180.0
C14	C13	C16	C17	26.7	185.0
C14	C13	C16	N21	206.8	4.7
C13	C14	C15	H15	176.6	180.2
C15	C14	C13	H14	180.0	179.9
C12	C13	C16	C14	175.6	180.0
C16	C13	C12	H12	0.6	0.0
C16	C13	C14	C15	180.0	179.8
C16	C13	C14	H14	360.0	359.9
C17	C16	C13	N21	179.9	180.3
C13	C16	C17	N18	181.9	180.0
C13	C16	C17	H17	1.9	360.0
C13	C16	N21	C20	178.4	179.8
C10	C15	C14	H15	180.0	180.2
C15	C14	C13	C16	180.0	179.8
C13	C14	C15	H14	180.0	180.1
C13	C16	C17	N21	180.1	179.7
C17	C16	N21	C20	358.5	359.5
C16	C17	N18	C19	359.7	0.0
N18	C17	C16	H17	180.0	180.0
C13	C16	N21	C17	179.9	180.3
N21	C16	C17	N18	1.8	0.2
N21	C16	C17	H17	181.8	180.3
C19	C20	N21	C16	359.8	0.5
C16	N21	C20	C22	181.5	180.3
N18	C17	C16	N21	1.8	0.2
C16	C17	N18	H17	180.0	180.0
C17	N18	C19	C20	358.5	0.0
C17	N18	C19	N31	178.1	179.9
C19	N18	C17	H17	179.7	180.0
C20	C19	N18	N31	180.4	180.1
N18	C19	C20	N21	1.7	359.7
N18	C19	C20	C22	179.9	180.0
N18	C19	N31	H311	0.0	334.7
N18	C19	N31	H312	120.0	154.7
C16	N21	C20	C19	359.8	0.5
N18	C19	C20	N31	179.5	179.9
C20	C19	N31	H311	179.6	154.6
C20	C19	N31	H312	299.5	334.6
N21	C20	C19	C22	181.8	179.7
C19	C20	C22	O23	355.0	5.2
C19	C20	C22	N24	177.2	185.2
N18	C19	N31	C20	180.5	180.1
N31	C19	C20	N21	182.2	179.8
N31	C19	C20	C22	0.4	0.1
H311	N31	C19	H312	240.0	180.0
N21	C20	C19	N31	182.2	179.8
C19	C20	N21	C22	178.3	180.3
N21	C20	C22	O23	173.2	185.5
N21	C20	C22	N24	355.4	5.4
C22	C20	C19	N31	0.4	0.1
C19	C20	C22	N21	181.8	179.7
O23	C22	C20	N24	177.8	180.1
C20	C22	N24	C25	180.4	185.3
C20	C22	N24	H24	0.4	5.3
C20	C22	O23	N24	182.4	179.9
O23	C22	N24	C25	2.7	5.2
O23	C22	N24	H24	182.7	185.2
C20	C22	N24	O23	177.7	180.1
C22	N24	C25	C26	184.3	32.3
C22	N24	C25	C30	6.9	212.0
C25	N24	C22	H24	180.0	180.0
C22	N24	C25	H24	180.0	180.0
C26	C25	N24	C30	177.4	180.2
N24	C25	C26	C27	181.8	180.0
N24	C25	C26	H26	1.8	0.0
N24	C25	C30	N29	178.1	179.7
N24	C25	C30	H30	358.1	360.0
N24	C25	C26	C30	182.4	179.8
C26	C25	N24	H24	4.3	212.3
C26	C25	C30	N29	0.7	359.5
C26	C25	C30	H30	180.7	179.7
C25	C26	C27	C28	1.1	0.1
C27	C26	C25	H26	180.0	180.0
C25	C26	C27	H27	181.1	179.9
N24	C25	C30	C26	177.4	180.2
C30	C25	N24	H24	186.9	32.1
C30	C25	C26	C27	359.5	0.2
C30	C25	C26	H26	179.4	180.2
C28	N29	C30	C25	358.5	0.5
N29	C30	C25	H30	180.0	179.7
C27	C26	C25	C30	359.5	0.2
C25	C26	C27	H26	180.0	180.0
C26	C27	C28	N29	358.1	359.9
C28	C27	C26	H27	180.0	180.1
C26	C27	C28	H28	178.2	180.0
C28	C27	C26	H26	181.1	180.1
C26	C27	C28	H27	180.0	179.9
C27	C28	N29	C30	2.1	359.8
N29	C28	C27	H28	180.0	180.0
C25	C30	N29	C28	358.5	0.5
N29	C28	C27	H27	178.1	180.0
C27	C28	N29	H28	180.0	180.0
C28	N29	C30	H30	178.5	180.3
C25	C30	N29	H30	180.0	180.3
C30	N29	C28	H28	182.1	179.7
N2	C1	H11C	C6	239.1	240.1
H11C	C1	N2	C3	300.0	292.7
H11C	C1	N2	C4	65.1	56.9
N2	C1	H11C	H12C	119.5	120.0
H11C	C1	C6	N6	289.4	293.9
C6	C1	H11C	H12C	240.4	239.9
H11C	C1	C6	H61C	49.6	53.6
H11C	C1	C6	H62C	169.2	174.2
N2	C1	H12C	C6	120.9	119.9
H12C	C1	N2	C3	59.7	52.7
H12C	C1	N2	C4	184.8	177.0
N2	C1	H12C	H11C	240.5	239.9
H12C	C1	C6	N6	169.6	173.8
C6	C1	H12C	H11C	119.6	120.1
H12C	C1	C6	H61C	289.8	293.5
H12C	C1	C6	H62C	49.4	54.0
C1	C6	H61C	N6	238.8	241.0
H61C	C6	C1	H11C	49.6	53.6
H61C	C6	C1	H12C	289.8	293.5
C1	C6	H61C	H62C	119.4	120.5
N6	C6	H61C	H62C	240.6	239.6
C1	C6	H62C	N6	121.2	119.1
H62C	C6	C1	H11C	169.2	174.2
H62C	C6	C1	H12C	49.4	54.0
C1	C6	H62C	H61C	240.6	239.5
N6	C6	H62C	H61C	119.4	120.4
H31C	C3	N2	C4	52.2	295.7
N2	C3	H31C	H32C	120.0	119.9
N2	C3	H31C	H33C	240.0	240.0
H32C	C3	H31C	H33C	120.1	120.1
H32C	C3	N2	C4	172.2	55.6
N2	C3	H32C	H31C	240.0	240.1
N2	C3	H32C	H33C	120.0	120.1
H31C	C3	H32C	H33C	240.0	240.0
H33C	C3	N2	C4	292.2	175.7
N2	C3	H33C	H31C	120.0	119.9
N2	C3	H33C	H32C	240.0	240.0
H31C	C3	H33C	H32C	120.0	120.0
N2	C4	H41C	C5	237.2	240.2
N2	C4	H41C	H42C	118.6	120.0
H41C	C4	C5	N6	192.9	186.3
C5	C4	H41C	H42C	241.4	239.8
H41C	C4	C5	H51C	312.9	306.0
H41C	C4	C5	H52C	73.0	66.5
N2	C4	H42C	C5	122.8	119.8
N2	C4	H42C	H41C	241.4	240.0
H42C	C4	C5	N6	73.8	66.1
C5	C4	H42C	H41C	118.6	120.2
H42C	C4	C5	H51C	193.8	185.8
H42C	C4	C5	H52C	313.9	306.3
C4	C5	H51C	N6	240.2	240.9
H51C	C5	C4	H41C	312.9	306.0
H51C	C5	C4	H42C	193.8	185.8
C4	C5	H51C	H52C	120.1	120.4
H51C	C5	N6	S7	105.9	111.5
H51C	C5	N6	C6	287.0	291.4
N6	C5	H51C	H52C	239.9	239.5
C4	C5	H52C	N6	119.8	119.1
H52C	C5	C4	H41C	73.0	66.5
H52C	C5	C4	H42C	313.9	306.3
C4	C5	H52C	H51C	239.9	239.6
H52C	C5	N6	S7	345.9	350.9
H52C	C5	N6	C6	166.9	170.9
N6	C5	H52C	H51C	120.1	120.5
H11	C11	C10	C15	178.8	180.2
C10	C11	H11	C12	180.0	180.0
H11	C11	C12	C13	182.2	180.0
H11	C11	C12	H12	2.2	360.0
C10	C15	H15	C14	180.0	179.8
H15	C15	C14	H14	356.6	0.1
C11	C12	H12	C13	180.0	180.1
H12	C12	C11	H11	2.2	360.0
H12	C12	C13	C14	176.2	180.0
H12	C12	C13	C16	0.6	0.0
H14	C14	C13	C16	360.0	359.9
C13	C14	H14	C15	180.0	179.9
H14	C14	C15	H15	356.6	0.1
H17	C17	C16	N21	181.8	180.3
C16	C17	H17	N18	180.0	180.0
H17	C17	N18	C19	179.7	180.0
C19	N31	H311	H312	120.0	180.0
C19	N31	H312	H311	240.0	180.0
C22	N24	H24	C25	180.0	180.0
H24	N24	C25	C26	4.3	212.3
H24	N24	C25	C30	186.9	32.1
H26	C26	C25	C30	179.4	180.2
C25	C26	H26	C27	180.0	180.0
H26	C26	C27	C28	181.1	180.1
H26	C26	C27	H27	1.1	359.9
C25	C30	H30	N29	180.0	179.7
C26	C27	H27	C28	180.0	180.1
H27	C27	C26	H26	1.1	359.9
H27	C27	C28	N29	178.1	180.0
H27	C27	C28	H28	358.2	0.1
C27	C28	H28	N29	180.0	180.0
H28	C28	C27	H27	358.2	0.1
H28	C28	N29	C30	182.1	179.7