PDB Chemical Component GP6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GP6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C1 1.326 1.303
N1 HN1 1.019 0.971
N2 C1 1.331 1.378
N2 HN21 1.020 0.970
N2 HN22 1.021 0.969
C1 C2 1.400 1.479
C2 C3 1.399 1.396
C2 C7 1.395 1.395
C3 C4 1.398 1.378
C3 H3 1.103 1.080
C4 C5 1.403 1.389
C4 H4 1.103 1.080
C5 C6 1.396 1.390
C5 N3 1.357 1.396
C6 C7 1.397 1.378
C6 H6 1.103 1.081
C7 H7 1.104 1.080
N3 C8 1.345 1.348
N3 HN3 1.020 0.969
C8 O1 1.240 1.214
C8 N4 1.338 1.348
N4 C9 1.343 1.400
N4 HN4 1.019 0.970
C9 C10 1.398 1.388
C9 C14 1.400 1.389
C10 C11 1.397 1.381
C10 H10 1.103 1.080
C11 C12 1.395 1.383
C11 H11 1.103 1.079
C12 C13 1.390 1.383
C12 CL 1.717 1.737
C13 C14 1.396 1.381
C13 H13 1.103 1.081
C14 H14 1.104 1.080

Bond Angles for GP6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 N1 HN1 53.4 120.0
N1 C1 N2 119.1 120.0
N1 C1 C2 120.9 120.0
C1 N2 HN21 119.2 120.0
C1 N2 HN22 108.8 120.0
N2 C1 C2 119.2 120.0
HN21 N2 HN22 108.7 120.0
C1 C2 C3 122.0 120.1
C1 C2 C7 120.7 120.1
C3 C2 C7 117.3 119.8
C2 C3 C4 121.4 120.0
C2 C3 H3 119.3 120.0
C2 C7 C6 121.9 120.0
C2 C7 H7 119.0 120.0
C4 C3 H3 119.3 120.0
C3 C4 C5 120.6 120.0
C3 C4 H4 119.5 119.9
C5 C4 H4 119.9 120.0
C4 C5 C6 118.3 120.2
C4 C5 N3 122.4 119.9
C6 C5 N3 119.2 119.9
C5 C6 C7 120.4 120.1
C5 C6 H6 119.8 120.0
C5 N3 C8 125.1 119.9
C5 N3 HN3 106.7 120.0
C7 C6 H6 119.8 119.9
C6 C7 H7 119.1 120.0
C8 N3 HN3 106.7 120.0
N3 C8 O1 123.5 120.1
N3 C8 N4 114.2 119.9
O1 C8 N4 122.2 120.0
C8 N4 C9 127.5 120.0
C8 N4 HN4 116.0 120.1
C9 N4 HN4 116.5 119.9
N4 C9 C10 118.9 120.0
N4 C9 C14 122.1 120.1
C10 C9 C14 119.0 119.9
C9 C10 C11 120.5 119.9
C9 C10 H10 119.7 120.0
C9 C14 C13 120.6 119.9
C9 C14 H14 119.8 120.0
C11 C10 H10 119.8 120.1
C10 C11 C12 120.0 120.0
C10 C11 H11 120.1 119.9
C12 C11 H11 120.0 120.0
C11 C12 C13 120.0 120.2
C11 C12 CL 121.4 119.9
C13 C12 CL 118.6 119.9
C12 C13 C14 120.0 120.1
C12 C13 H13 119.8 120.0
C14 C13 H13 120.2 120.0
C13 C14 H14 119.6 120.1

Torsion Angles for GP6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N1 C1 N2 HN21 179.9 360.0
N1 C1 N2 HN22 54.7 179.8
N2 C1 N1 C2 190.2 180.0
N1 C1 C2 C3 357.9 359.9
N1 C1 C2 C7 176.8 179.8
HN1 N1 C1 N2 175.0 179.9
HN1 N1 C1 C2 344.9 360.0
N2 C1 N1 HN1 175.0 179.9
N1 C1 N2 C2 170.0 180.0
HN21 N2 C1 HN22 125.2 180.2
N2 C1 C2 C3 167.7 180.0
N2 C1 C2 C7 346.7 359.8
C1 N2 HN21 HN22 234.7 179.8
HN21 N2 C1 C2 9.9 179.9
C1 N2 HN22 HN21 131.2 180.2
HN22 N2 C1 C2 244.7 359.7
C2 C1 N1 HN1 344.9 360.0
N1 C1 C2 N2 190.2 180.0
C2 C1 N2 HN21 9.9 179.9
C2 C1 N2 HN22 244.7 359.7
C3 C2 C1 C7 181.1 180.2
C1 C2 C3 C4 178.9 180.0
C1 C2 C3 H3 358.9 0.0
C1 C2 C7 C6 181.1 179.7
C1 C2 C7 H7 1.2 0.2
C1 C2 C3 C7 179.0 179.8
C3 C2 C7 C6 0.1 359.5
C3 C2 C7 H7 180.2 180.0
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C5 0.1 360.0
C2 C3 C4 H4 180.0 180.0
C1 C2 C7 C3 181.0 180.2
C7 C2 C3 C4 360.0 0.2
C7 C2 C3 H3 179.9 180.2
C5 C6 C7 C2 359.8 0.5
C2 C7 C6 H6 179.8 180.2
C6 C7 C2 H7 179.9 179.5
C4 C3 C2 C7 360.0 0.2
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 359.9 0.1
C3 C4 C5 N3 179.3 180.0
H3 C3 C2 C7 179.9 180.2
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 180.1 180.0
H3 C3 C4 H4 0.1 0.1
C5 C4 C3 H3 180.1 180.0
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 N3 180.5 180.0
C4 C5 C6 C7 0.2 359.7
C4 C5 C6 H6 180.2 180.0
C4 C5 N3 C8 307.4 33.2
C4 C5 N3 HN3 182.2 213.2
H4 C4 C3 H3 0.1 0.1
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 179.9 180.0
H4 C4 C5 N3 359.4 360.0
C2 C7 C6 C5 359.8 0.5
C6 C5 C4 H4 179.9 180.0
C4 C5 C6 N3 179.5 180.0
C6 C5 N3 C8 126.9 213.1
C6 C5 N3 HN3 1.7 33.2
C7 C6 C5 H6 180.0 179.7
C5 C6 C7 H7 179.7 180.0
N3 C5 C4 H4 359.4 360.0
C4 C5 N3 C6 180.5 180.0
N3 C5 C6 C7 180.7 179.7
N3 C5 C6 H6 0.7 0.0
C8 N3 C5 HN3 125.2 180.0
C5 N3 C8 O1 3.5 5.4
C5 N3 C8 N4 183.5 185.5
C2 C7 C6 H7 180.1 180.5
C7 C6 C5 N3 180.7 179.7
C5 C6 C7 H6 180.0 180.3
H6 C6 C5 N3 0.7 0.0
C5 C6 H6 C7 180.0 179.7
H6 C6 C7 H7 359.8 359.7
C2 C7 H7 C6 179.9 179.5
H7 C7 C6 H6 359.8 359.7
C5 N3 C8 HN3 234.8 180.0
O1 C8 N3 N4 180.0 179.9
N3 C8 N4 C9 167.8 185.4
N3 C8 N4 HN4 347.8 5.3
C5 N3 HN3 C8 135.8 180.0
HN3 N3 C8 O1 128.7 185.3
HN3 N3 C8 N4 308.7 5.4
O1 C8 N3 HN3 128.7 185.3
N3 C8 O1 N4 180.0 180.1
O1 C8 N4 C9 347.8 5.5
O1 C8 N4 HN4 167.8 185.4
N4 C8 N3 HN3 308.7 5.4
N3 C8 N4 O1 180.0 179.9
C9 N4 C8 HN4 180.0 180.1
C8 N4 C9 C10 152.6 32.7
C8 N4 C9 C14 332.1 212.4
C8 N4 C9 HN4 180.0 179.9
C10 C9 N4 C14 180.5 180.3
N4 C9 C10 C11 178.5 180.0
N4 C9 C10 H10 358.5 360.0
N4 C9 C14 C13 181.3 179.7
N4 C9 C14 H14 1.3 0.3
C8 N4 HN4 C9 180.0 180.1
HN4 N4 C9 C10 332.6 212.8
HN4 N4 C9 C14 152.1 32.5
C10 C9 N4 HN4 332.6 212.8
N4 C9 C10 C14 179.5 179.7
C10 C9 C14 C13 0.7 359.4
C10 C9 C14 H14 180.7 180.0
C11 C10 C9 H10 180.0 180.1
C9 C10 C11 C12 0.7 360.0
C9 C10 C11 H11 180.6 180.0
C14 C9 N4 HN4 152.1 32.5
N4 C9 C14 C10 180.5 180.3
C14 C9 C10 C11 359.0 0.3
C14 C9 C10 H10 179.0 180.2
C12 C13 C14 C9 359.8 0.6
C9 C14 C13 H13 179.8 180.3
C13 C14 C9 H14 180.0 179.4
C11 C10 C9 C14 359.0 0.3
C9 C10 C11 H10 180.0 179.9
C12 C11 C10 H11 180.0 180.0
C10 C11 C12 C13 359.8 0.0
C10 C11 C12 CL 179.9 180.0
H10 C10 C9 C14 179.0 180.2
C9 C10 H10 C11 180.0 180.1
H10 C10 C11 C12 180.7 180.0
H10 C10 C11 H11 0.7 0.1
C12 C11 C10 H10 180.7 180.0
C10 C11 C12 H11 180.0 180.0
C13 C12 C11 CL 179.9 180.0
C11 C12 C13 C14 359.9 359.7
C11 C12 C13 H13 179.9 180.0
H11 C11 C10 H10 0.7 0.1
C10 C11 H11 C12 180.0 180.0
H11 C11 C12 C13 179.9 180.0
H11 C11 C12 CL 359.9 360.0
C9 C14 C13 C12 359.8 0.6
C13 C12 C11 H11 179.9 180.0
C11 C12 C13 CL 180.1 180.0
C14 C13 C12 H13 180.0 179.7
C12 C13 C14 H14 179.8 180.0
CL C12 C11 H11 359.9 360.0
C11 C12 CL C13 179.9 180.0
CL C12 C13 C14 179.9 179.7
CL C12 C13 H13 359.8 0.0
C9 C14 C13 H14 180.0 180.6
C14 C13 C12 CL 179.9 179.7
C12 C13 C14 H13 180.0 180.3
H13 C13 C12 CL 359.8 0.0
C12 C13 H13 C14 180.0 179.7
H13 C13 C14 H14 359.8 359.7
C9 C14 H14 C13 180.0 179.4
H14 C14 C13 H13 359.8 359.7