PDB Chemical Component GOX
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GOX
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
N1 |
1.339 |
1.292 |
C1 |
C2 |
1.537 |
1.513 |
C1 |
N5 |
1.358 |
1.388 |
N1 |
O7 |
1.313 |
1.415 |
C2 |
O2 |
1.432 |
1.429 |
C2 |
C3 |
1.512 |
1.533 |
C2 |
HC2 |
1.115 |
1.090 |
N5 |
C5 |
1.458 |
1.471 |
N5 |
HN5 |
1.021 |
0.969 |
O7 |
HO7 |
0.951 |
0.967 |
O2 |
HO2 |
0.949 |
0.966 |
C3 |
O3 |
1.426 |
1.429 |
C3 |
C4 |
1.549 |
1.531 |
C3 |
HC3 |
1.115 |
1.089 |
O3 |
HO3 |
0.950 |
0.967 |
C4 |
O4 |
1.428 |
1.430 |
C4 |
C5 |
1.571 |
1.529 |
C4 |
HC4 |
1.115 |
1.090 |
O4 |
HO4 |
0.950 |
0.966 |
C5 |
C6 |
1.514 |
1.529 |
C5 |
HC5 |
1.115 |
1.090 |
C6 |
O6 |
1.439 |
1.429 |
C6 |
HC61 |
1.116 |
1.090 |
C6 |
HC62 |
1.114 |
1.090 |
O6 |
HO6 |
0.950 |
0.967 |
Bond Angles for GOX
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C1 |
C2 |
118.0 |
121.3 |
N1 |
C1 |
N5 |
115.2 |
121.2 |
C1 |
N1 |
O7 |
122.6 |
120.0 |
C2 |
C1 |
N5 |
126.8 |
117.4 |
C1 |
C2 |
O2 |
115.8 |
109.7 |
C1 |
C2 |
C3 |
109.7 |
108.4 |
C1 |
C2 |
HC2 |
106.5 |
109.6 |
C1 |
N5 |
C5 |
119.7 |
117.6 |
C1 |
N5 |
HN5 |
108.5 |
121.2 |
N1 |
O7 |
HO7 |
122.6 |
114.1 |
O2 |
C2 |
C3 |
114.0 |
109.7 |
O2 |
C2 |
HC2 |
101.4 |
109.6 |
C2 |
O2 |
HO2 |
115.8 |
114.1 |
C3 |
C2 |
HC2 |
108.7 |
109.7 |
C2 |
C3 |
O3 |
105.4 |
109.5 |
C2 |
C3 |
C4 |
107.0 |
109.3 |
C2 |
C3 |
HC3 |
115.0 |
109.5 |
C5 |
N5 |
HN5 |
108.6 |
121.3 |
N5 |
C5 |
C4 |
105.8 |
108.8 |
N5 |
C5 |
C6 |
103.9 |
109.6 |
N5 |
C5 |
HC5 |
118.7 |
109.6 |
O3 |
C3 |
C4 |
113.5 |
109.5 |
O3 |
C3 |
HC3 |
108.8 |
109.5 |
C3 |
O3 |
HO3 |
105.4 |
114.0 |
C4 |
C3 |
HC3 |
107.2 |
109.6 |
C3 |
C4 |
O4 |
109.8 |
109.4 |
C3 |
C4 |
C5 |
106.8 |
109.4 |
C3 |
C4 |
HC4 |
110.0 |
109.5 |
O4 |
C4 |
C5 |
106.4 |
109.7 |
O4 |
C4 |
HC4 |
110.4 |
109.5 |
C4 |
O4 |
HO4 |
109.8 |
114.0 |
C5 |
C4 |
HC4 |
113.2 |
109.3 |
C4 |
C5 |
C6 |
118.1 |
109.6 |
C4 |
C5 |
HC5 |
104.6 |
109.5 |
C6 |
C5 |
HC5 |
106.5 |
109.7 |
C5 |
C6 |
O6 |
111.5 |
109.5 |
C5 |
C6 |
HC61 |
111.4 |
109.5 |
C5 |
C6 |
HC62 |
111.4 |
109.5 |
O6 |
C6 |
HC61 |
111.4 |
109.5 |
O6 |
C6 |
HC62 |
111.5 |
109.5 |
C6 |
O6 |
HO6 |
111.6 |
114.0 |
HC61 |
C6 |
HC62 |
98.9 |
109.4 |
Torsion Angles for GOX
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
N1 |
N5 |
180.3 |
180.3 |
N1 |
C1 |
C2 |
O2 |
320.6 |
252.3 |
N1 |
C1 |
C2 |
C3 |
189.9 |
132.6 |
N1 |
C1 |
C2 |
HC2 |
72.4 |
12.8 |
N1 |
C1 |
N5 |
C5 |
173.8 |
226.5 |
N1 |
C1 |
N5 |
HN5 |
48.5 |
46.5 |
C1 |
N1 |
O7 |
HO7 |
180.0 |
180.0 |
N1 |
C1 |
C2 |
N5 |
179.7 |
179.7 |
C2 |
C1 |
N1 |
O7 |
187.4 |
180.0 |
C2 |
C1 |
N5 |
C5 |
353.5 |
46.2 |
C2 |
C1 |
N5 |
HN5 |
228.2 |
226.2 |
O2 |
C2 |
C1 |
C3 |
130.7 |
119.8 |
O2 |
C2 |
C1 |
HC2 |
248.2 |
239.6 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
60.0 |
C3 |
C2 |
C1 |
HC2 |
117.5 |
119.8 |
C1 |
C2 |
C3 |
O3 |
197.2 |
294.9 |
C1 |
C2 |
C3 |
C4 |
318.4 |
54.8 |
C1 |
C2 |
C3 |
HC3 |
77.4 |
174.8 |
N1 |
C1 |
N5 |
C2 |
180.3 |
180.3 |
N5 |
C1 |
N1 |
O7 |
7.1 |
359.7 |
N5 |
C1 |
C2 |
O2 |
140.9 |
72.6 |
N5 |
C1 |
C2 |
C3 |
10.2 |
312.8 |
N5 |
C1 |
C2 |
HC2 |
252.7 |
193.1 |
C5 |
N5 |
C1 |
HN5 |
125.3 |
180.0 |
C1 |
N5 |
C5 |
C4 |
33.6 |
310.5 |
C1 |
N5 |
C5 |
C6 |
158.6 |
70.4 |
C1 |
N5 |
C5 |
HC5 |
276.6 |
190.8 |
O7 |
N1 |
C1 |
C2 |
187.4 |
180.0 |
O7 |
N1 |
C1 |
N5 |
7.1 |
359.7 |
O2 |
C2 |
C1 |
N5 |
140.9 |
72.6 |
C1 |
C2 |
O2 |
C3 |
231.3 |
241.0 |
C1 |
C2 |
O2 |
HC2 |
114.8 |
120.4 |
C3 |
C2 |
O2 |
HC2 |
243.4 |
239.4 |
O2 |
C2 |
C3 |
O3 |
65.6 |
175.1 |
O2 |
C2 |
C3 |
C4 |
186.7 |
295.0 |
O2 |
C2 |
C3 |
HC3 |
305.7 |
55.1 |
C3 |
C2 |
C1 |
N5 |
10.2 |
312.8 |
C1 |
C2 |
C3 |
O2 |
131.7 |
119.8 |
C1 |
C2 |
C3 |
HC2 |
243.9 |
240.3 |
O2 |
C2 |
C3 |
HC2 |
112.3 |
120.5 |
C3 |
C2 |
O2 |
HO2 |
308.6 |
179.0 |
O3 |
C3 |
C2 |
C4 |
238.9 |
240.1 |
O3 |
C3 |
C2 |
HC3 |
119.9 |
120.1 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
300.0 |
C4 |
C3 |
C2 |
HC3 |
241.0 |
240.0 |
C2 |
C3 |
C4 |
O4 |
187.6 |
57.6 |
C2 |
C3 |
C4 |
C5 |
72.5 |
297.3 |
C2 |
C3 |
C4 |
HC4 |
309.3 |
177.6 |
HC2 |
C2 |
C1 |
N5 |
252.7 |
193.1 |
C1 |
C2 |
HC2 |
O2 |
238.5 |
239.5 |
C1 |
C2 |
HC2 |
C3 |
118.1 |
119.0 |
O2 |
C2 |
HC2 |
C3 |
239.6 |
239.5 |
HC2 |
C2 |
O2 |
HO2 |
65.2 |
299.5 |
HC2 |
C2 |
C3 |
O3 |
313.3 |
54.6 |
HC2 |
C2 |
C3 |
C4 |
74.5 |
174.5 |
HC2 |
C2 |
C3 |
HC3 |
193.5 |
294.5 |
C1 |
N5 |
C5 |
HN5 |
234.8 |
180.0 |
C3 |
C4 |
C5 |
N5 |
293.5 |
57.2 |
O4 |
C4 |
C5 |
N5 |
176.2 |
297.1 |
N5 |
C5 |
C4 |
HC4 |
54.7 |
177.0 |
C4 |
C5 |
N5 |
C6 |
235.0 |
240.1 |
C4 |
C5 |
N5 |
HC5 |
117.0 |
119.7 |
C6 |
C5 |
N5 |
HC5 |
242.0 |
239.6 |
N5 |
C5 |
C6 |
O6 |
301.9 |
67.1 |
N5 |
C5 |
C6 |
HC61 |
67.1 |
187.1 |
N5 |
C5 |
C6 |
HC62 |
176.6 |
307.1 |
C1 |
N5 |
HN5 |
C5 |
131.6 |
180.0 |
HN5 |
N5 |
C5 |
C4 |
158.8 |
130.5 |
HN5 |
N5 |
C5 |
C6 |
283.8 |
250.3 |
HN5 |
N5 |
C5 |
HC5 |
41.8 |
10.8 |
HO2 |
O2 |
C2 |
C3 |
308.6 |
179.0 |
HO2 |
O2 |
C2 |
HC2 |
65.2 |
299.5 |
O3 |
C3 |
C2 |
HC2 |
313.3 |
54.6 |
C2 |
C3 |
O3 |
C4 |
116.8 |
119.8 |
C2 |
C3 |
O3 |
HC3 |
236.1 |
240.0 |
C4 |
C3 |
O3 |
HC3 |
119.3 |
120.2 |
O3 |
C3 |
C4 |
O4 |
303.4 |
177.5 |
O3 |
C3 |
C4 |
C5 |
188.4 |
57.2 |
O3 |
C3 |
C4 |
HC4 |
65.1 |
297.4 |
C4 |
C3 |
C2 |
HC2 |
74.5 |
174.5 |
C2 |
C3 |
C4 |
O3 |
244.1 |
240.1 |
C2 |
C3 |
C4 |
HC3 |
123.9 |
120.0 |
N5 |
C5 |
C4 |
C3 |
293.5 |
57.2 |
O3 |
C3 |
C4 |
HC3 |
239.8 |
239.9 |
C4 |
C3 |
O3 |
HO3 |
63.2 |
180.2 |
O4 |
C4 |
C3 |
C5 |
115.0 |
120.3 |
O4 |
C4 |
C3 |
HC4 |
238.3 |
240.0 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
60.0 |
C5 |
C4 |
C3 |
HC4 |
123.2 |
119.8 |
C3 |
C4 |
C5 |
C6 |
177.8 |
297.3 |
C3 |
C4 |
C5 |
HC5 |
59.6 |
176.9 |
HC3 |
C3 |
C2 |
HC2 |
193.5 |
294.5 |
C2 |
C3 |
HC3 |
O3 |
118.0 |
120.0 |
C2 |
C3 |
HC3 |
C4 |
241.1 |
240.1 |
O3 |
C3 |
HC3 |
C4 |
123.1 |
120.1 |
HC3 |
C3 |
O3 |
HO3 |
303.9 |
60.0 |
HC3 |
C3 |
C4 |
O4 |
63.6 |
297.6 |
HC3 |
C3 |
C4 |
C5 |
308.6 |
177.4 |
HC3 |
C3 |
C4 |
HC4 |
185.3 |
57.6 |
HO3 |
O3 |
C3 |
C4 |
63.2 |
180.2 |
HO3 |
O3 |
C3 |
HC3 |
303.9 |
60.0 |
N5 |
C5 |
C4 |
O4 |
176.2 |
297.1 |
O4 |
C4 |
C3 |
HC3 |
63.6 |
297.6 |
C3 |
C4 |
O4 |
C5 |
244.8 |
239.9 |
C3 |
C4 |
O4 |
HC4 |
121.5 |
120.0 |
C5 |
C4 |
O4 |
HC4 |
236.8 |
240.0 |
O4 |
C4 |
C5 |
C6 |
60.5 |
177.2 |
O4 |
C4 |
C5 |
HC5 |
302.3 |
56.9 |
C4 |
C5 |
N5 |
HN5 |
158.8 |
130.5 |
N5 |
C5 |
C4 |
C6 |
115.7 |
119.8 |
N5 |
C5 |
C4 |
HC5 |
233.9 |
240.2 |
C5 |
C4 |
C3 |
HC3 |
308.6 |
177.4 |
C3 |
C4 |
C5 |
O4 |
117.3 |
120.1 |
C3 |
C4 |
C5 |
HC4 |
238.8 |
240.1 |
O4 |
C4 |
C5 |
HC4 |
121.5 |
120.1 |
C5 |
C4 |
O4 |
HO4 |
295.3 |
180.0 |
C6 |
C5 |
C4 |
HC5 |
118.2 |
120.4 |
C4 |
C5 |
C6 |
O6 |
58.6 |
186.4 |
C4 |
C5 |
C6 |
HC61 |
183.8 |
306.5 |
C4 |
C5 |
C6 |
HC62 |
293.3 |
66.4 |
HC4 |
C4 |
C3 |
HC3 |
185.3 |
57.6 |
C3 |
C4 |
HC4 |
O4 |
238.6 |
240.1 |
C3 |
C4 |
HC4 |
C5 |
119.4 |
119.8 |
O4 |
C4 |
HC4 |
C5 |
240.8 |
239.8 |
HC4 |
C4 |
O4 |
HO4 |
58.5 |
300.0 |
HC4 |
C4 |
C5 |
C6 |
299.1 |
57.2 |
HC4 |
C4 |
C5 |
HC5 |
180.8 |
296.8 |
HO4 |
O4 |
C4 |
C5 |
295.3 |
180.0 |
HO4 |
O4 |
C4 |
HC4 |
58.5 |
300.0 |
C6 |
C5 |
N5 |
HN5 |
283.8 |
250.3 |
N5 |
C5 |
C6 |
C4 |
243.3 |
240.6 |
N5 |
C5 |
C6 |
HC5 |
126.1 |
120.4 |
C6 |
C5 |
C4 |
HC4 |
299.1 |
57.2 |
C4 |
C5 |
C6 |
HC5 |
242.8 |
239.7 |
O6 |
C6 |
C5 |
HC61 |
234.8 |
240.0 |
O6 |
C6 |
C5 |
HC62 |
125.3 |
120.0 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
HC61 |
C6 |
C5 |
HC62 |
250.5 |
240.1 |
HC5 |
C5 |
N5 |
HN5 |
41.8 |
10.8 |
N5 |
C5 |
HC5 |
C4 |
117.6 |
119.3 |
N5 |
C5 |
HC5 |
C6 |
243.4 |
239.6 |
HC5 |
C5 |
C4 |
HC4 |
180.8 |
296.8 |
C4 |
C5 |
HC5 |
C6 |
125.8 |
120.3 |
HC5 |
C5 |
C6 |
O6 |
175.8 |
306.7 |
HC5 |
C5 |
C6 |
HC61 |
301.0 |
66.8 |
HC5 |
C5 |
C6 |
HC62 |
50.5 |
186.7 |
O6 |
C6 |
C5 |
HC5 |
175.8 |
306.7 |
C5 |
C6 |
O6 |
HC61 |
125.2 |
120.0 |
C5 |
C6 |
O6 |
HC62 |
234.7 |
240.0 |
HC61 |
C6 |
O6 |
HC62 |
109.5 |
119.9 |
HC61 |
C6 |
C5 |
HC5 |
301.0 |
66.8 |
C5 |
C6 |
HC61 |
O6 |
234.7 |
240.0 |
C5 |
C6 |
HC61 |
HC62 |
117.3 |
120.0 |
O6 |
C6 |
HC61 |
HC62 |
242.6 |
240.0 |
HC61 |
C6 |
O6 |
HO6 |
54.7 |
59.9 |
HC62 |
C6 |
C5 |
HC5 |
50.5 |
186.7 |
C5 |
C6 |
HC62 |
O6 |
125.3 |
120.0 |
C5 |
C6 |
HC62 |
HC61 |
242.7 |
240.0 |
O6 |
C6 |
HC62 |
HC61 |
117.4 |
120.0 |
HC62 |
C6 |
O6 |
HO6 |
305.2 |
300.0 |
HO6 |
O6 |
C6 |
HC61 |
54.7 |
59.9 |
HO6 |
O6 |
C6 |
HC62 |
305.2 |
300.0 |