PDB Chemical Component GNG

Ideal Model

Chemical Description

Name 2'-DEOXY-GUANOSINE
Formula C10 H13 N5 O4
Formal charge 0
Molecular weight 267.241 g/mol
Component type NON-POLYMER
Nonstandard Parent Id G

Chemical features

Atom count 32
Chiral atom count 3
Chiral atoms C4' C1' C3'
Bond count 34
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxyguanosine
Systematic name (OpenEye OEToolkits) 2-amino-9-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-6-one

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC(=O)c2ncn([C@H]3C[C@H](O)[C@@H](CO)O3)c2N1
SMILES (CACTVS) NC1=NC(=O)c2ncn([CH]3C[CH](O)[CH](CO)O3)c2N1
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO)O)NC(=NC2=O)N
InChI descriptor InChI=1S/C10H13N5O4/c11-10-13-8-7(9(18)14-10)12-3-15(8)6-1-4(17)5(2-16)19-6/h3-6,16-17H,1-2H2,(H3,11,13,14,18)/t4-,5+,6+/m0/s1
InChIKey descriptor YKBGVTZYEHREMT-KVQBGUIXSA-N

Status Information

Last modified 2011-06-04
Created 2003-02-13
Release status REL
Model PDB code 1NH3
Processing site RCSB