PDB Chemical Component GN7

Ideal Model

Chemical Description

Name N7-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
Formula C10 H14 N5 O7 P
Formal charge 0
Molecular weight 347.221 g/mol
Component type DNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 37
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms OP3 HO3'
Bond count 39
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2-amino-7-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-1,7-dihydro-6H-purin-6-one
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-7-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2ncn([C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)c2C(=O)N1
SMILES (CACTVS) NC1=Nc2ncn([CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)c2C(=O)N1
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)C(=O)NC(=N2)N
InChI descriptor InChI=1/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)15(3-12-8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1/f/h14,18-19H,11H2
InChIKey descriptor QJBOPENFRRNEQL-ZFTCRPPQDX

Status Information

Last modified 2009-01-07
Created 1999-07-08
Release status REL
Model PDB code 1GN7
Processing site RCSB