PDB Chemical Component GMH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GMH

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.544	1.530
C1	O1	1.418	1.429
C1	O5	1.429	1.426
C1	H1	1.115	1.090
C2	C3	1.542	1.531
C2	O2	1.417	1.429
C2	H2	1.115	1.090
C3	C4	1.537	1.533
C3	O3	1.458	1.429
C3	H3	1.115	1.090
C4	C5	1.535	1.529
C4	O4	1.446	1.429
C4	H4	1.115	1.089
C5	C6	1.527	1.530
C5	O5	1.446	1.426
C5	H5	1.115	1.091
C6	C7	1.521	1.529
C6	O6	1.418	1.428
C6	H6	1.116	1.090
C7	O7	1.418	1.429
C7	H71	1.115	1.090
C7	H72	1.115	1.090
O1	HO1	0.950	0.967
O2	HO2	0.951	0.967
O3	HO3	0.950	0.966
O4	HO4	0.949	0.967
O6	HO6	0.949	0.967
O7	HO7	0.949	0.968

Bond Angles for GMH

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	110.0	109.3
C2	C1	O5	109.1	109.8
C2	C1	H1	110.7	109.5
C1	C2	C3	108.7	109.1
C1	C2	O2	108.6	109.5
C1	C2	H2	110.8	109.5
O1	C1	O5	113.2	109.4
O1	C1	H1	106.3	109.4
C1	O1	HO1	110.1	106.8
O5	C1	H1	107.4	109.4
C1	O5	C5	114.2	107.7
C3	C2	O2	110.0	109.6
C3	C2	H2	109.3	109.6
C2	C3	C4	110.5	108.6
C2	C3	O3	115.3	109.6
C2	C3	H3	104.9	109.6
O2	C2	H2	109.5	109.5
C2	O2	HO2	108.6	106.8
C4	C3	O3	110.6	109.7
C4	C3	H3	110.3	109.7
C3	C4	C5	107.1	109.0
C3	C4	O4	109.9	109.6
C3	C4	H4	110.8	109.5
O3	C3	H3	104.8	109.6
C3	O3	HO3	115.4	106.8
C5	C4	O4	109.7	109.5
C5	C4	H4	111.1	109.6
C4	C5	C6	113.2	109.5
C4	C5	O5	110.0	109.8
C4	C5	H5	106.8	109.4
O4	C4	H4	108.3	109.6
C4	O4	HO4	110.0	106.8
C6	C5	O5	110.5	109.4
C6	C5	H5	106.4	109.4
C5	C6	C7	109.7	109.5
C5	C6	O6	110.3	109.5
C5	C6	H6	108.8	109.4
O5	C5	H5	109.8	109.3
C7	C6	O6	109.9	109.5
C7	C6	H6	109.3	109.4
C6	C7	O7	109.6	109.5
C6	C7	H71	112.1	109.5
C6	C7	H72	112.1	109.5
O6	C6	H6	108.7	109.5
C6	O6	HO6	110.3	106.8
O7	C7	H71	112.2	109.5
O7	C7	H72	112.2	109.5
C7	O7	HO7	109.6	106.8
H71	C7	H72	98.3	109.5

Torsion Angles for GMH

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	O5	235.3	240.0
O1	C1	C2	H1	117.3	119.8
C2	C1	O1	HO1	180.0	180.3
O5	C1	C2	H1	242.0	239.8
C2	C1	O5	C5	299.2	292.5
C3	C2	C1	O2	119.7	119.9
C3	C2	C1	H2	239.9	240.0
C1	C2	C3	C4	302.5	306.3
C1	C2	C3	O3	176.1	186.4
C1	C2	C3	H3	61.4	66.1
O2	C2	C1	H2	120.2	120.1
C1	C2	O2	HO2	180.0	300.1
C2	C1	O1	O5	122.3	120.2
C2	C1	O1	H1	240.0	240.1
O1	C1	C2	C3	291.8	301.2
O1	C1	C2	O2	172.1	181.2
O1	C1	C2	H2	51.9	61.2
O5	C1	O1	H1	117.7	119.9
O1	C1	O5	C5	62.0	52.5
C2	C1	O5	O1	237.2	240.0
C2	C1	O5	H1	120.1	120.2
O5	C1	C2	C3	56.5	61.2
O5	C1	C2	O2	296.9	301.2
O5	C1	C2	H2	176.6	181.2
O1	C1	O5	H1	242.9	240.2
O5	C1	O1	HO1	57.7	60.0
C4	C5	O5	C1	62.6	67.6
C6	C5	O5	C1	188.3	187.7
C1	O5	C5	H5	305.3	307.5
C2	C1	H1	O1	119.5	119.8
C2	C1	H1	O5	241.0	239.6
H1	C1	C2	C3	174.5	181.4
H1	C1	C2	O2	54.9	61.4
H1	C1	C2	H2	294.6	301.4
O1	C1	H1	O5	121.5	119.8
H1	C1	O1	HO1	300.0	300.2
H1	C1	O5	C5	179.1	172.3
C3	C2	C1	O1	291.8	301.2
C3	C2	C1	O5	56.5	61.2
C3	C2	C1	H1	174.5	181.4
C1	C2	C3	O2	241.2	240.1
C1	C2	C3	H2	121.0	119.9
O2	C2	C3	H2	239.8	239.8
C3	C2	O2	HO2	61.1	180.5
C4	C3	C2	O3	126.4	119.9
C4	C3	C2	H3	241.2	240.2
C2	C3	C4	C5	57.7	53.8
C2	C3	C4	O4	176.8	173.7
C2	C3	C4	H4	296.4	293.9
O3	C3	C2	H3	114.8	120.3
C2	C3	O3	HO3	180.1	300.0
O2	C2	C1	O1	172.1	181.2
O2	C2	C1	O5	296.9	301.2
O2	C2	C1	H1	54.9	61.4
C1	C2	O2	C3	118.9	119.6
C1	C2	O2	H2	239.0	239.9
C3	C2	O2	H2	120.1	120.3
O2	C2	C3	C4	61.3	66.2
O2	C2	C3	O3	294.9	306.3
O2	C2	C3	H3	180.1	186.0
H2	C2	C1	O1	51.9	61.2
H2	C2	C1	O5	176.6	181.2
H2	C2	C1	H1	294.6	301.4
C1	C2	H2	C3	240.3	240.4
C1	C2	H2	O2	119.7	120.1
C3	C2	H2	O2	239.4	239.7
H2	C2	C3	C4	181.5	186.3
H2	C2	C3	O3	55.1	66.4
H2	C2	C3	H3	300.4	306.2
H2	C2	O2	HO2	301.0	60.2
C4	C3	C2	O2	61.3	66.2
C4	C3	C2	H2	181.5	186.3
C2	C3	C4	O3	231.0	240.2
C2	C3	C4	H3	115.5	119.8
O3	C3	C4	H3	244.5	239.6
C4	C3	O3	HO3	53.7	180.8
C5	C4	C3	O4	240.9	240.1
C5	C4	C3	H4	121.3	119.9
C3	C4	C5	C6	177.6	178.6
C3	C4	C5	O5	301.7	298.7
C3	C4	C5	H5	60.9	58.7
O4	C4	C3	H4	240.4	239.8
C3	C4	O4	HO4	180.0	60.0
O3	C3	C2	O2	294.9	306.3
O3	C3	C2	H2	55.1	66.4
C2	C3	O3	C4	126.4	119.2
C2	C3	O3	H3	245.2	239.7
C4	C3	O3	H3	118.8	120.5
O3	C3	C4	C5	186.7	173.6
O3	C3	C4	O4	305.8	293.5
O3	C3	C4	H4	65.4	53.7
H3	C3	C2	O2	180.1	186.0
H3	C3	C2	H2	300.4	306.2
C2	C3	H3	C4	241.0	240.8
C2	C3	H3	O3	121.9	120.3
C4	C3	H3	O3	240.9	239.5
H3	C3	C4	C5	302.2	294.0
H3	C3	C4	O4	61.2	53.9
H3	C3	C4	H4	180.9	174.1
H3	C3	O3	HO3	294.9	60.3
C1	O5	C5	C4	62.6	67.6
C5	C4	C3	O3	186.7	173.6
C5	C4	C3	H3	302.2	294.0
C3	C4	C5	O4	119.2	119.9
C3	C4	C5	H4	238.9	240.1
O4	C4	C5	H4	119.7	120.2
C5	C4	O4	HO4	297.4	179.5
C6	C5	C4	O5	235.9	239.9
C6	C5	C4	H5	116.8	119.9
C4	C5	C6	C7	195.2	180.2
C4	C5	C6	O6	74.0	60.1
C4	C5	C6	H6	314.8	300.2
O5	C5	C4	H5	240.9	240.0
O4	C4	C3	O3	305.8	293.5
O4	C4	C3	H3	61.2	53.9
C3	C4	O4	C5	242.5	240.5
C3	C4	O4	H4	121.2	120.2
C5	C4	O4	H4	238.6	239.7
O4	C4	C5	C6	58.4	58.7
O4	C4	C5	O5	182.5	178.8
O4	C4	C5	H5	301.6	298.8
H4	C4	C3	O3	65.4	53.7
H4	C4	C3	H3	180.9	174.1
C3	C4	H4	C5	118.9	119.5
C3	C4	H4	O4	239.4	239.8
C5	C4	H4	O4	120.5	120.2
H4	C4	C5	C6	298.7	298.5
H4	C4	C5	O5	62.8	58.6
H4	C4	C5	H5	182.0	178.6
H4	C4	O4	HO4	58.8	299.8
C1	O5	C5	C6	188.3	187.7
C6	C5	C4	O4	58.4	58.7
C6	C5	C4	H4	298.7	298.5
C4	C5	C6	O5	123.9	120.3
C4	C5	C6	H5	243.0	240.1
O5	C5	C6	H5	119.1	119.8
C7	C6	C5	O6	121.3	120.1
C7	C6	C5	H6	240.4	240.0
C5	C6	C7	O7	186.5	180.0
C5	C6	C7	H71	311.8	60.0
C5	C6	C7	H72	61.2	300.0
O6	C6	C5	H6	119.2	120.0
C5	C6	O6	HO6	180.0	60.1
C5	O5	C1	H1	179.1	172.3
O5	C5	C4	O4	182.5	178.8
O5	C5	C4	H4	62.8	58.6
C4	C5	O5	C6	234.3	239.8
C4	C5	O5	H5	117.3	120.0
C6	C5	O5	H5	243.0	240.2
O5	C5	C6	C7	71.4	59.8
O5	C5	C6	O6	310.1	299.8
O5	C5	C6	H6	190.9	179.8
H5	C5	C4	O4	301.6	298.8
H5	C5	C4	H4	182.0	178.6
C4	C5	H5	C6	121.2	119.9
C4	C5	H5	O5	240.7	239.7
C6	C5	H5	O5	119.6	119.8
H5	C5	C6	C7	312.2	300.1
H5	C5	C6	O6	191.0	180.0
H5	C5	C6	H6	71.8	60.1
C7	C6	C5	O5	71.4	59.8
C7	C6	C5	H5	312.2	300.1
C5	C6	C7	O6	238.5	239.9
C5	C6	C7	H6	119.3	119.9
O6	C6	C7	H6	240.8	240.0
C7	C6	O6	HO6	58.8	300.0
O7	C7	C6	H71	234.7	120.0
O7	C7	C6	H72	125.3	240.0
C6	C7	O7	HO7	180.0	180.0
H71	C7	C6	H72	250.6	120.0
O6	C6	C5	O5	310.1	299.8
O6	C6	C5	H5	191.0	180.0
C5	C6	O6	C7	121.2	120.1
C5	C6	O6	H6	240.7	240.1
C7	C6	O6	H6	119.6	120.0
O6	C6	C7	O7	308.0	300.1
O6	C6	C7	H71	73.3	180.0
O6	C6	C7	H72	182.7	60.0
H6	C6	C5	O5	190.9	179.8
H6	C6	C5	H5	71.8	60.1
C5	C6	H6	C7	240.2	240.0
C5	C6	H6	O6	120.2	120.0
C7	C6	H6	O6	240.0	240.0
H6	C6	C7	O7	67.3	60.1
H6	C6	C7	H71	192.6	300.0
H6	C6	C7	H72	302.0	180.0
H6	C6	O6	HO6	299.3	180.0
O7	C7	C6	O6	308.0	300.1
O7	C7	C6	H6	67.3	60.1
C6	C7	O7	H71	125.3	240.0
C6	C7	O7	H72	234.7	120.0
H71	C7	O7	H72	109.5	240.0
H71	C7	C6	O6	73.3	180.0
H71	C7	C6	H6	192.6	300.0
C6	C7	H71	O7	236.1	120.0
C6	C7	H71	H72	118.0	240.0
O7	C7	H71	H72	241.9	120.0
H71	C7	O7	HO7	54.8	300.0
H72	C7	C6	O6	182.7	60.0
H72	C7	C6	H6	302.0	180.0
C6	C7	H72	O7	123.9	240.0
C6	C7	H72	H71	242.0	120.0
O7	C7	H72	H71	118.1	240.0
H72	C7	O7	HO7	305.3	60.0
HO1	O1	C1	O5	57.7	60.0
HO1	O1	C1	H1	300.0	300.2
HO2	O2	C2	H2	301.0	60.2
HO3	O3	C3	H3	294.9	60.3
HO4	O4	C4	H4	58.8	299.8
HO6	O6	C6	H6	299.3	180.0
HO7	O7	C7	H71	54.8	300.0
HO7	O7	C7	H72	305.3	60.0