PDB Chemical Component GLT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GLT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.496 1.529
C1 S5 1.800 1.815
C1 O1 1.435 1.427
C1 H1 1.114 1.090
C2 C3 1.520 1.525
C2 O2 1.402 1.429
C2 H2 1.115 1.090
C3 C4 1.501 1.525
C3 O3 1.423 1.429
C3 H3 1.115 1.090
C4 C5 1.529 1.528
C4 O4 1.464 1.429
C4 H4 1.116 1.090
C5 C6 1.512 1.530
C5 S5 1.799 1.813
C5 H5 1.115 1.090
C6 O6 1.418 1.428
C6 H61 1.114 1.090
C6 H62 1.115 1.090
O1 HO1 0.950 0.967
O2 HO2 0.950 0.967
O3 HO3 0.950 0.967
O4 HO4 0.951 0.966
O6 HO6 0.950 0.967

Bond Angles for GLT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 S5 109.0 109.2
C2 C1 O1 116.7 109.6
C2 C1 H1 103.6 109.5
C1 C2 C3 121.7 110.0
C1 C2 O2 115.0 109.4
C1 C2 H2 95.3 109.4
S5 C1 O1 105.1 109.5
S5 C1 H1 115.4 109.5
C1 S5 C5 105.7 99.6
O1 C1 H1 107.5 109.5
C1 O1 HO1 116.7 106.8
C3 C2 O2 113.1 109.3
C3 C2 H2 98.3 109.4
C2 C3 C4 117.5 110.5
C2 C3 O3 119.0 109.3
C2 C3 H3 94.4 109.2
O2 C2 H2 109.1 109.4
C2 O2 HO2 115.0 106.8
C4 C3 O3 107.5 109.3
C4 C3 H3 109.5 109.3
C3 C4 C5 115.6 110.0
C3 C4 O4 112.0 109.4
C3 C4 H4 101.2 109.3
O3 C3 H3 107.6 109.2
C3 O3 HO3 118.9 106.8
C5 C4 O4 101.0 109.4
C5 C4 H4 112.0 109.3
C4 C5 C6 107.5 109.5
C4 C5 S5 108.4 109.3
C4 C5 H5 110.0 109.5
O4 C4 H4 115.7 109.4
C4 O4 HO4 111.9 106.9
C6 C5 S5 105.0 109.5
C6 C5 H5 113.2 109.4
C5 C6 O6 107.6 109.5
C5 C6 H61 112.9 109.5
C5 C6 H62 112.9 109.5
S5 C5 H5 112.4 109.5
O6 C6 H61 112.9 109.5
O6 C6 H62 112.9 109.5
C6 O6 HO6 107.6 106.8
H61 C6 H62 97.5 109.4

Torsion Angles for GLT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
S5 C1 C2 O1 118.8 119.9
S5 C1 C2 H1 236.7 240.1
C2 C1 S5 C5 311.4 303.9
O1 C1 C2 H1 117.9 120.2
C2 C1 O1 HO1 179.9 179.8
C3 C2 C1 O2 217.1 239.9
C3 C2 C1 H2 103.2 120.2
C1 C2 C3 C4 316.7 291.3
C1 C2 C3 O3 184.3 171.0
C1 C2 C3 H3 71.4 51.5
O2 C2 C1 H2 246.0 240.3
C1 C2 O2 HO2 179.9 60.0
C2 C1 S5 O1 234.2 240.0
C2 C1 S5 H1 115.9 119.9
S5 C1 C2 C3 44.5 64.8
S5 C1 C2 O2 187.4 184.8
S5 C1 C2 H2 301.4 304.6
O1 C1 S5 H1 241.7 239.9
S5 C1 O1 HO1 59.1 60.0
C4 C5 S5 C1 55.3 56.1
C6 C5 S5 C1 170.0 176.1
C1 S5 C5 H5 293.4 296.2
C2 C1 O1 S5 120.8 119.8
C2 C1 O1 H1 244.3 239.8
O1 C1 C2 C3 285.8 304.8
O1 C1 C2 O2 68.6 64.9
O1 C1 C2 H2 182.6 184.6
S5 C1 O1 H1 123.4 120.1
O1 C1 S5 C5 77.2 63.8
C2 C1 H1 S5 241.0 240.3
C2 C1 H1 O1 124.1 120.2
H1 C1 C2 C3 167.9 184.7
H1 C1 C2 O2 310.7 304.7
H1 C1 C2 H2 64.7 64.5
S5 C1 H1 O1 243.1 239.9
H1 C1 S5 C5 195.5 183.9
H1 C1 O1 HO1 295.6 299.9
C3 C2 C1 S5 44.5 64.8
C3 C2 C1 O1 285.8 304.8
C3 C2 C1 H1 167.9 184.7
C1 C2 C3 O2 143.5 120.1
C1 C2 C3 H2 258.4 239.8
O2 C2 C3 H2 114.9 119.7
C3 C2 O2 HO2 326.0 180.5
C4 C3 C2 O3 132.4 120.3
C4 C3 C2 H3 245.3 239.7
C2 C3 C4 C5 48.5 68.6
C2 C3 C4 O4 163.5 188.8
C2 C3 C4 H4 287.2 308.5
O3 C3 C2 H3 112.9 119.5
C2 C3 O3 HO3 180.0 300.1
O2 C2 C1 S5 187.4 184.8
O2 C2 C1 O1 68.6 64.9
O2 C2 C1 H1 310.7 304.7
C1 C2 O2 C3 214.0 239.5
C1 C2 O2 H2 105.7 119.7
C3 C2 O2 H2 251.7 240.2
O2 C2 C3 C4 173.2 171.2
O2 C2 C3 O3 40.8 50.9
O2 C2 C3 H3 287.9 291.4
H2 C2 C1 S5 301.4 304.6
H2 C2 C1 O1 182.6 184.6
H2 C2 C1 H1 64.7 64.5
C1 C2 H2 C3 123.1 120.6
C1 C2 H2 O2 241.2 240.3
C3 C2 H2 O2 118.1 119.7
H2 C2 C3 C4 58.3 51.4
H2 C2 C3 O3 285.9 291.2
H2 C2 C3 H3 173.0 171.7
H2 C2 O2 HO2 74.3 300.2
C4 C3 C2 O2 173.2 171.2
C4 C3 C2 H2 58.3 51.4
C2 C3 C4 O3 222.6 239.7
C2 C3 C4 H3 106.0 120.3
O3 C3 C4 H3 243.4 240.5
C4 C3 O3 HO3 43.3 179.0
C5 C4 C3 O4 245.0 239.8
C5 C4 C3 H4 121.2 120.1
C3 C4 C5 C6 190.7 175.3
C3 C4 C5 S5 303.7 295.3
C3 C4 C5 H5 67.0 55.3
O4 C4 C3 H4 236.2 240.3
C3 C4 O4 HO4 180.0 60.0
O3 C3 C2 O2 40.8 50.9
O3 C3 C2 H2 285.9 291.2
C2 C3 O3 C4 136.6 121.1
C2 C3 O3 H3 254.5 240.5
C4 C3 O3 H3 117.9 119.5
O3 C3 C4 C5 185.9 188.9
O3 C3 C4 O4 300.9 309.1
O3 C3 C4 H4 64.6 68.8
H3 C3 C2 O2 287.9 291.4
H3 C3 C2 H2 173.0 171.7
C2 C3 H3 C4 238.8 239.0
C2 C3 H3 O3 122.3 119.5
C4 C3 H3 O3 243.5 240.5
H3 C3 C4 C5 302.5 308.4
H3 C3 C4 O4 57.5 68.6
H3 C3 C4 H4 181.2 188.3
H3 C3 O3 HO3 285.5 59.6
C1 S5 C5 C4 55.3 56.1
C5 C4 C3 O3 185.9 188.9
C5 C4 C3 H3 302.5 308.4
C3 C4 C5 O4 121.1 120.2
C3 C4 C5 H4 244.8 239.9
O4 C4 C5 H4 123.7 119.7
C5 C4 O4 HO4 303.6 180.5
C6 C5 C4 S5 247.0 240.0
C6 C5 C4 H5 123.7 120.0
C4 C5 C6 O6 169.5 179.9
C4 C5 C6 H61 294.8 59.9
C4 C5 C6 H62 44.2 300.0
S5 C5 C4 H5 236.7 240.0
O4 C4 C3 O3 300.9 309.1
O4 C4 C3 H3 57.5 68.6
C3 C4 O4 C5 236.4 239.4
C3 C4 O4 H4 115.2 119.7
C5 C4 O4 H4 238.8 240.3
O4 C4 C5 C6 69.6 55.2
O4 C4 C5 S5 182.6 175.1
O4 C4 C5 H5 305.9 295.1
H4 C4 C3 O3 64.6 68.8
H4 C4 C3 H3 181.2 188.3
C3 C4 H4 C5 123.7 120.5
C3 C4 H4 O4 238.8 240.3
C5 C4 H4 O4 115.1 119.8
H4 C4 C5 C6 305.9 295.4
H4 C4 C5 S5 58.9 55.4
H4 C4 C5 H5 182.1 175.4
H4 C4 O4 HO4 64.8 300.3
C1 S5 C5 C6 170.0 176.1
C6 C5 C4 O4 69.6 55.2
C6 C5 C4 H4 305.9 295.4
C4 C5 C6 S5 115.3 119.9
C4 C5 C6 H5 238.2 239.9
S5 C5 C6 H5 122.9 120.1
O6 C6 C5 H61 234.7 120.0
O6 C6 C5 H62 125.3 239.9
C5 C6 O6 HO6 180.0 180.0
H61 C6 C5 H62 250.5 119.9
C5 S5 C1 O1 77.2 63.8
C5 S5 C1 H1 195.5 183.9
S5 C5 C4 O4 182.6 175.1
S5 C5 C4 H4 58.9 55.4
C4 C5 S5 C6 245.3 240.0
C4 C5 S5 H5 121.9 120.0
C6 C5 S5 H5 236.5 240.0
S5 C5 C6 O6 54.2 60.0
S5 C5 C6 H61 179.5 300.0
S5 C5 C6 H62 288.9 180.1
H5 C5 C4 O4 305.9 295.1
H5 C5 C4 H4 182.1 175.4
C4 C5 H5 C6 120.3 120.1
C4 C5 H5 S5 239.1 240.1
C6 C5 H5 S5 118.7 120.0
H5 C5 C6 O6 291.3 300.0
H5 C5 C6 H61 56.5 179.9
H5 C5 C6 H62 166.0 60.1
O6 C6 C5 S5 54.2 60.0
O6 C6 C5 H5 291.3 300.0
C5 C6 O6 H61 125.3 240.0
C5 C6 O6 H62 234.7 120.1
H61 C6 O6 H62 109.4 240.1
H61 C6 C5 S5 179.5 300.0
H61 C6 C5 H5 56.5 179.9
C5 C6 H61 O6 237.6 120.1
C5 C6 H61 H62 118.8 240.1
O6 C6 H61 H62 241.2 120.0
H61 C6 O6 HO6 54.7 300.0
H62 C6 C5 S5 288.9 180.1
H62 C6 C5 H5 166.0 60.1
C5 C6 H62 O6 122.3 239.9
C5 C6 H62 H61 241.2 119.9
O6 C6 H62 H61 118.8 240.0
H62 C6 O6 HO6 305.3 59.9
HO1 O1 C1 H1 295.6 299.9
HO2 O2 C2 H2 74.3 300.2
HO3 O3 C3 H3 285.5 59.6
HO4 O4 C4 H4 64.8 300.3
HO6 O6 C6 H61 54.7 300.0
HO6 O6 C6 H62 305.3 59.9