PDB Chemical Component GLK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GLK
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.490 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.008 |
| CA |
C |
1.521 |
1.530 |
| CA |
CB |
1.534 |
1.529 |
| CA |
HA |
1.100 |
1.090 |
| C |
O |
1.245 |
1.430 |
| CB |
CG |
1.518 |
1.530 |
| CB |
HB2 |
1.100 |
1.090 |
| CB |
HB3 |
1.100 |
1.091 |
| CG |
CD |
1.521 |
1.507 |
| CG |
HG2 |
1.100 |
1.089 |
| CG |
HG3 |
1.100 |
1.091 |
| CD |
OE1 |
1.253 |
1.208 |
| CD |
OE2 |
1.249 |
1.342 |
| OE2 |
HE2 |
0.950 |
0.967 |
| O |
H1 |
0.950 |
0.967 |
| C |
OXT |
1.430 |
1.429 |
| C |
H10 |
1.100 |
1.091 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for GLK
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| N |
CA |
C |
109.1 |
109.5 |
| N |
CA |
CB |
110.3 |
109.5 |
| N |
CA |
HA |
109.4 |
109.5 |
| H |
N |
H2 |
109.5 |
111.0 |
| C |
CA |
CB |
110.2 |
109.5 |
| C |
CA |
HA |
109.5 |
109.4 |
| CA |
C |
O |
119.0 |
109.5 |
| CA |
C |
OXT |
106.2 |
109.5 |
| CA |
C |
H10 |
103.8 |
109.4 |
| CB |
CA |
HA |
108.3 |
109.5 |
| CA |
CB |
CG |
113.4 |
109.5 |
| CA |
CB |
HB2 |
108.2 |
109.5 |
| CA |
CB |
HB3 |
108.2 |
109.5 |
| C |
O |
H1 |
109.5 |
114.0 |
| O |
C |
OXT |
104.1 |
109.5 |
| O |
C |
H10 |
105.8 |
109.5 |
| CG |
CB |
HB2 |
108.1 |
109.5 |
| CG |
CB |
HB3 |
108.2 |
109.4 |
| CB |
CG |
CD |
113.5 |
109.5 |
| CB |
CG |
HG2 |
108.2 |
109.5 |
| CB |
CG |
HG3 |
108.2 |
109.5 |
| HB2 |
CB |
HB3 |
110.8 |
109.5 |
| CD |
CG |
HG2 |
108.1 |
109.5 |
| CD |
CG |
HG3 |
108.2 |
109.4 |
| CG |
CD |
OE1 |
119.5 |
120.0 |
| CG |
CD |
OE2 |
118.0 |
120.0 |
| HG2 |
CG |
HG3 |
110.7 |
109.5 |
| OE1 |
CD |
OE2 |
122.5 |
120.0 |
| CD |
OE2 |
HE2 |
109.5 |
117.0 |
| OXT |
C |
H10 |
118.8 |
109.5 |
| C |
OXT |
HXT |
109.5 |
114.1 |
Torsion Angles for GLK
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| C |
CA |
N |
CB |
121.1 |
120.0 |
| C |
CA |
N |
HA |
240.2 |
240.0 |
| N |
CA |
C |
O |
155.9 |
60.0 |
| N |
CA |
C |
OXT |
39.1 |
180.0 |
| N |
CA |
C |
H10 |
273.1 |
300.0 |
| CB |
CA |
N |
HA |
119.0 |
120.0 |
| N |
CA |
CB |
CG |
302.8 |
295.0 |
| N |
CA |
CB |
HB2 |
62.7 |
55.0 |
| N |
CA |
CB |
HB3 |
182.8 |
175.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H |
N |
CA |
C |
180.0 |
60.0 |
| H |
N |
CA |
CB |
58.9 |
300.0 |
| H |
N |
CA |
HA |
299.8 |
180.0 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| H2 |
N |
CA |
C |
300.0 |
184.0 |
| H2 |
N |
CA |
CB |
178.9 |
64.0 |
| H2 |
N |
CA |
HA |
59.8 |
303.9 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| C |
CA |
N |
H2 |
300.0 |
184.0 |
| N |
CA |
C |
CB |
238.8 |
240.0 |
| N |
CA |
C |
HA |
119.8 |
120.0 |
| CB |
CA |
C |
HA |
241.0 |
240.0 |
| C |
CA |
CB |
CG |
182.3 |
174.9 |
| C |
CA |
CB |
HB2 |
302.2 |
295.0 |
| C |
CA |
CB |
HB3 |
62.3 |
55.0 |
| CA |
C |
O |
H1 |
180.0 |
180.0 |
| O |
C |
CA |
OXT |
116.8 |
240.0 |
| O |
C |
CA |
H10 |
242.8 |
120.0 |
| OXT |
C |
CA |
H10 |
126.0 |
240.0 |
| CA |
C |
OXT |
HXT |
180.0 |
300.0 |
| CB |
CA |
N |
H |
58.9 |
300.0 |
| CB |
CA |
N |
H2 |
178.9 |
64.0 |
| N |
CA |
CB |
C |
120.5 |
120.0 |
| N |
CA |
CB |
HA |
240.3 |
240.0 |
| C |
CA |
CB |
HA |
119.8 |
120.0 |
| CB |
CA |
C |
O |
277.1 |
180.0 |
| CB |
CA |
C |
OXT |
160.3 |
300.0 |
| CB |
CA |
C |
H10 |
34.3 |
60.0 |
| CG |
CB |
CA |
HB2 |
240.0 |
240.0 |
| CG |
CB |
CA |
HB3 |
120.0 |
119.9 |
| CA |
CB |
CG |
CD |
181.2 |
180.0 |
| CA |
CB |
CG |
HG2 |
301.2 |
300.0 |
| CA |
CB |
CG |
HG3 |
61.2 |
60.0 |
| HB2 |
CB |
CA |
HB3 |
240.0 |
240.0 |
| HA |
CA |
N |
H |
299.8 |
180.0 |
| HA |
CA |
N |
H2 |
59.8 |
303.9 |
| N |
CA |
HA |
C |
240.4 |
240.0 |
| N |
CA |
HA |
CB |
120.2 |
120.0 |
| C |
CA |
HA |
CB |
239.8 |
240.0 |
| HA |
CA |
C |
O |
36.2 |
300.0 |
| HA |
CA |
C |
OXT |
279.4 |
60.0 |
| HA |
CA |
C |
H10 |
153.4 |
180.0 |
| HA |
CA |
CB |
CG |
62.5 |
55.0 |
| HA |
CA |
CB |
HB2 |
182.5 |
175.0 |
| HA |
CA |
CB |
HB3 |
302.5 |
295.0 |
| O |
C |
CA |
CB |
277.1 |
180.0 |
| O |
C |
CA |
HA |
36.2 |
300.0 |
| CA |
C |
O |
OXT |
242.1 |
120.0 |
| CA |
C |
O |
H10 |
116.1 |
240.0 |
| OXT |
C |
O |
H10 |
234.0 |
120.0 |
| O |
C |
OXT |
HXT |
53.6 |
60.0 |
| CG |
CB |
CA |
HA |
62.5 |
55.0 |
| CA |
CB |
CG |
HB2 |
120.0 |
120.0 |
| CA |
CB |
CG |
HB3 |
240.0 |
240.0 |
| HB2 |
CB |
CG |
HB3 |
120.0 |
120.0 |
| CD |
CG |
CB |
HG2 |
240.0 |
239.9 |
| CD |
CG |
CB |
HG3 |
120.0 |
119.9 |
| CB |
CG |
CD |
OE1 |
28.2 |
0.1 |
| CB |
CG |
CD |
OE2 |
207.5 |
180.0 |
| HG2 |
CG |
CB |
HG3 |
240.0 |
240.0 |
| HB2 |
CB |
CA |
HA |
182.5 |
175.0 |
| CA |
CB |
HB2 |
CG |
236.8 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
118.4 |
120.0 |
| CG |
CB |
HB2 |
HB3 |
241.6 |
240.1 |
| HB2 |
CB |
CG |
CD |
61.2 |
59.9 |
| HB2 |
CB |
CG |
HG2 |
181.2 |
180.0 |
| HB2 |
CB |
CG |
HG3 |
301.2 |
300.0 |
| HB3 |
CB |
CA |
HA |
302.5 |
295.0 |
| CA |
CB |
HB3 |
CG |
123.2 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
241.6 |
240.0 |
| CG |
CB |
HB3 |
HB2 |
118.4 |
120.0 |
| HB3 |
CB |
CG |
CD |
301.2 |
300.0 |
| HB3 |
CB |
CG |
HG2 |
61.2 |
60.0 |
| HB3 |
CB |
CG |
HG3 |
181.2 |
180.0 |
| CD |
CG |
CB |
HB2 |
61.2 |
59.9 |
| CD |
CG |
CB |
HB3 |
301.2 |
300.0 |
| CB |
CG |
CD |
HG2 |
120.0 |
120.0 |
| CB |
CG |
CD |
HG3 |
240.0 |
240.0 |
| HG2 |
CG |
CD |
HG3 |
120.0 |
120.0 |
| OE1 |
CD |
CG |
OE2 |
180.6 |
180.0 |
| CG |
CD |
OE2 |
HE2 |
180.7 |
180.0 |
| HG2 |
CG |
CB |
HB2 |
181.2 |
180.0 |
| HG2 |
CG |
CB |
HB3 |
61.2 |
60.0 |
| CB |
CG |
HG2 |
CD |
236.7 |
239.9 |
| CB |
CG |
HG2 |
HG3 |
118.4 |
120.0 |
| CD |
CG |
HG2 |
HG3 |
241.7 |
240.0 |
| HG2 |
CG |
CD |
OE1 |
268.2 |
240.0 |
| HG2 |
CG |
CD |
OE2 |
87.5 |
60.0 |
| HG3 |
CG |
CB |
HB2 |
301.2 |
300.0 |
| HG3 |
CG |
CB |
HB3 |
181.2 |
180.0 |
| CB |
CG |
HG3 |
CD |
123.3 |
120.0 |
| CB |
CG |
HG3 |
HG2 |
241.6 |
240.0 |
| CD |
CG |
HG3 |
HG2 |
118.3 |
120.0 |
| HG3 |
CG |
CD |
OE1 |
148.2 |
120.0 |
| HG3 |
CG |
CD |
OE2 |
327.6 |
300.0 |
| OE1 |
CD |
CG |
HG2 |
268.2 |
240.0 |
| OE1 |
CD |
CG |
HG3 |
148.2 |
120.0 |
| CG |
CD |
OE1 |
OE2 |
179.3 |
180.0 |
| OE1 |
CD |
OE2 |
HE2 |
0.0 |
360.0 |
| OE2 |
CD |
CG |
HG2 |
87.5 |
60.0 |
| OE2 |
CD |
CG |
HG3 |
327.6 |
300.0 |
| CG |
CD |
OE2 |
OE1 |
180.7 |
180.0 |
| H1 |
O |
C |
OXT |
297.9 |
60.0 |
| H1 |
O |
C |
H10 |
63.9 |
300.0 |
| OXT |
C |
CA |
CB |
160.3 |
300.0 |
| OXT |
C |
CA |
HA |
279.4 |
60.0 |
| CA |
C |
OXT |
O |
126.4 |
240.0 |
| CA |
C |
OXT |
H10 |
243.7 |
120.0 |
| OXT |
C |
O |
H1 |
297.9 |
60.0 |
| O |
C |
OXT |
H10 |
117.3 |
240.0 |
| H10 |
C |
CA |
CB |
34.3 |
60.0 |
| H10 |
C |
CA |
HA |
153.4 |
180.0 |
| CA |
C |
H10 |
O |
233.9 |
120.0 |
| CA |
C |
H10 |
OXT |
117.5 |
240.0 |
| H10 |
C |
O |
H1 |
63.9 |
300.0 |
| O |
C |
H10 |
OXT |
243.6 |
120.0 |
| H10 |
C |
OXT |
HXT |
296.2 |
180.0 |
| HXT |
OXT |
C |
H10 |
296.2 |
180.0 |