PDB Chemical Component GLJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GLJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.462 |
1.470 |
| N |
H |
1.000 |
1.009 |
| CA |
C |
1.578 |
1.506 |
| CA |
CB |
1.540 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| C |
O |
1.241 |
1.209 |
| CB |
CG |
1.522 |
1.530 |
| CB |
HB2 |
1.100 |
1.090 |
| CB |
HB3 |
1.100 |
1.090 |
| CG |
CD |
1.518 |
1.530 |
| CG |
HG2 |
1.100 |
1.090 |
| CG |
HG3 |
1.100 |
1.090 |
| CD |
OE1 |
1.416 |
1.430 |
| CD |
HD2 |
1.100 |
1.089 |
| CD |
OE2 |
1.430 |
1.429 |
| OE1 |
HE1 |
0.950 |
0.966 |
| N |
H2 |
1.000 |
1.009 |
| C |
OXT |
1.430 |
1.342 |
| OE2 |
HE2 |
0.950 |
0.967 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for GLJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
110.9 |
| N |
CA |
C |
112.0 |
109.5 |
| N |
CA |
CB |
109.2 |
109.5 |
| N |
CA |
HA |
109.4 |
109.4 |
| CA |
N |
H2 |
109.5 |
111.0 |
| H |
N |
H2 |
109.5 |
111.0 |
| C |
CA |
CB |
113.5 |
109.5 |
| C |
CA |
HA |
104.7 |
109.5 |
| CA |
C |
O |
121.8 |
120.0 |
| CA |
C |
OXT |
131.2 |
120.0 |
| CB |
CA |
HA |
107.8 |
109.5 |
| CA |
CB |
CG |
106.7 |
109.5 |
| CA |
CB |
HB2 |
110.4 |
109.5 |
| CA |
CB |
HB3 |
110.4 |
109.5 |
| O |
C |
OXT |
107.0 |
120.0 |
| CG |
CB |
HB2 |
110.4 |
109.5 |
| CG |
CB |
HB3 |
110.4 |
109.5 |
| CB |
CG |
CD |
111.6 |
109.4 |
| CB |
CG |
HG2 |
108.8 |
109.5 |
| CB |
CG |
HG3 |
108.8 |
109.5 |
| HB2 |
CB |
HB3 |
108.5 |
109.5 |
| CD |
CG |
HG2 |
108.8 |
109.5 |
| CD |
CG |
HG3 |
108.8 |
109.5 |
| CG |
CD |
OE1 |
110.1 |
109.4 |
| CG |
CD |
HD2 |
109.1 |
109.5 |
| CG |
CD |
OE2 |
109.3 |
109.5 |
| HG2 |
CG |
HG3 |
110.2 |
109.5 |
| OE1 |
CD |
HD2 |
109.1 |
109.5 |
| OE1 |
CD |
OE2 |
109.2 |
109.4 |
| CD |
OE1 |
HE1 |
109.5 |
114.0 |
| HD2 |
CD |
OE2 |
110.0 |
109.5 |
| CD |
OE2 |
HE2 |
109.5 |
114.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
Torsion Angles for GLJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| C |
CA |
N |
CB |
126.6 |
120.0 |
| C |
CA |
N |
HA |
244.4 |
240.0 |
| N |
CA |
C |
O |
29.3 |
340.0 |
| N |
CA |
C |
OXT |
209.3 |
160.0 |
| CB |
CA |
N |
HA |
117.7 |
120.0 |
| N |
CA |
CB |
CG |
177.4 |
295.0 |
| N |
CA |
CB |
HB2 |
297.3 |
55.0 |
| N |
CA |
CB |
HB3 |
57.4 |
175.0 |
| H |
N |
CA |
C |
180.0 |
60.0 |
| H |
N |
CA |
CB |
53.4 |
300.0 |
| H |
N |
CA |
HA |
295.6 |
180.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| N |
CA |
C |
CB |
235.7 |
240.0 |
| N |
CA |
C |
HA |
118.5 |
120.0 |
| C |
CA |
N |
H2 |
300.0 |
184.0 |
| CB |
CA |
C |
HA |
242.7 |
240.0 |
| C |
CA |
CB |
CG |
51.6 |
175.0 |
| C |
CA |
CB |
HB2 |
171.6 |
295.0 |
| C |
CA |
CB |
HB3 |
291.6 |
55.0 |
| O |
C |
CA |
OXT |
180.0 |
180.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| CB |
CA |
N |
H |
53.4 |
300.0 |
| N |
CA |
CB |
C |
125.8 |
120.0 |
| N |
CA |
CB |
HA |
241.2 |
240.1 |
| CB |
CA |
N |
H2 |
173.4 |
63.9 |
| C |
CA |
CB |
HA |
115.5 |
120.0 |
| CB |
CA |
C |
O |
153.6 |
100.0 |
| CB |
CA |
C |
OXT |
333.6 |
280.0 |
| CG |
CB |
CA |
HB2 |
240.0 |
240.0 |
| CG |
CB |
CA |
HB3 |
120.0 |
120.0 |
| CA |
CB |
CG |
CD |
295.2 |
180.0 |
| CA |
CB |
CG |
HG2 |
55.2 |
300.0 |
| CA |
CB |
CG |
HG3 |
175.2 |
60.0 |
| HB2 |
CB |
CA |
HB3 |
240.0 |
240.0 |
| HA |
CA |
N |
H |
295.6 |
180.0 |
| N |
CA |
HA |
C |
239.8 |
240.0 |
| N |
CA |
HA |
CB |
118.7 |
120.0 |
| HA |
CA |
N |
H2 |
55.6 |
304.0 |
| C |
CA |
HA |
CB |
238.9 |
240.0 |
| HA |
CA |
C |
O |
270.8 |
220.0 |
| HA |
CA |
C |
OXT |
90.8 |
40.0 |
| HA |
CA |
CB |
CG |
296.1 |
54.9 |
| HA |
CA |
CB |
HB2 |
56.1 |
174.9 |
| HA |
CA |
CB |
HB3 |
176.1 |
295.0 |
| O |
C |
CA |
CB |
153.6 |
100.0 |
| O |
C |
CA |
HA |
270.8 |
220.0 |
| CA |
C |
O |
OXT |
180.0 |
180.0 |
| O |
C |
OXT |
HXT |
0.0 |
0.0 |
| CG |
CB |
CA |
HA |
296.1 |
54.9 |
| CA |
CB |
CG |
HB2 |
120.0 |
120.0 |
| CA |
CB |
CG |
HB3 |
240.0 |
240.0 |
| HB2 |
CB |
CG |
HB3 |
120.0 |
120.0 |
| CD |
CG |
CB |
HG2 |
240.0 |
240.0 |
| CD |
CG |
CB |
HG3 |
120.0 |
120.0 |
| CB |
CG |
CD |
OE1 |
302.1 |
295.0 |
| CB |
CG |
CD |
HD2 |
61.9 |
55.0 |
| CB |
CG |
CD |
OE2 |
182.2 |
175.0 |
| HG2 |
CG |
CB |
HG3 |
240.0 |
240.0 |
| HB2 |
CB |
CA |
HA |
56.1 |
174.9 |
| CA |
CB |
HB2 |
CG |
242.3 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
121.1 |
120.0 |
| CG |
CB |
HB2 |
HB3 |
238.8 |
240.0 |
| HB2 |
CB |
CG |
CD |
175.2 |
60.0 |
| HB2 |
CB |
CG |
HG2 |
295.2 |
180.0 |
| HB2 |
CB |
CG |
HG3 |
55.2 |
300.0 |
| HB3 |
CB |
CA |
HA |
176.1 |
295.0 |
| CA |
CB |
HB3 |
CG |
117.7 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
238.9 |
240.0 |
| CG |
CB |
HB3 |
HB2 |
121.2 |
120.0 |
| HB3 |
CB |
CG |
CD |
55.1 |
300.0 |
| HB3 |
CB |
CG |
HG2 |
175.2 |
60.0 |
| HB3 |
CB |
CG |
HG3 |
295.1 |
180.0 |
| CD |
CG |
CB |
HB2 |
175.2 |
60.0 |
| CD |
CG |
CB |
HB3 |
55.1 |
300.0 |
| CB |
CG |
CD |
HG2 |
120.0 |
120.0 |
| CB |
CG |
CD |
HG3 |
240.0 |
240.0 |
| HG2 |
CG |
CD |
HG3 |
120.0 |
120.0 |
| OE1 |
CD |
CG |
HD2 |
240.2 |
240.0 |
| OE1 |
CD |
CG |
OE2 |
120.0 |
119.9 |
| CG |
CD |
OE1 |
HE1 |
180.0 |
300.0 |
| HD2 |
CD |
CG |
OE2 |
239.7 |
239.9 |
| CG |
CD |
OE2 |
HE2 |
180.0 |
180.0 |
| HG2 |
CG |
CB |
HB2 |
295.2 |
180.0 |
| HG2 |
CG |
CB |
HB3 |
175.2 |
60.0 |
| CB |
CG |
HG2 |
CD |
238.3 |
240.0 |
| CB |
CG |
HG2 |
HG3 |
119.1 |
120.1 |
| CD |
CG |
HG2 |
HG3 |
240.8 |
240.0 |
| HG2 |
CG |
CD |
OE1 |
182.1 |
175.0 |
| HG2 |
CG |
CD |
HD2 |
301.9 |
295.0 |
| HG2 |
CG |
CD |
OE2 |
62.2 |
55.1 |
| HG3 |
CG |
CB |
HB2 |
55.2 |
300.0 |
| HG3 |
CG |
CB |
HB3 |
295.1 |
180.0 |
| CB |
CG |
HG3 |
CD |
121.7 |
120.0 |
| CB |
CG |
HG3 |
HG2 |
240.9 |
240.0 |
| CD |
CG |
HG3 |
HG2 |
119.2 |
120.0 |
| HG3 |
CG |
CD |
OE1 |
62.1 |
55.0 |
| HG3 |
CG |
CD |
HD2 |
181.9 |
175.0 |
| HG3 |
CG |
CD |
OE2 |
302.1 |
295.1 |
| OE1 |
CD |
CG |
HG2 |
182.1 |
175.0 |
| OE1 |
CD |
CG |
HG3 |
62.1 |
55.0 |
| CG |
CD |
OE1 |
HD2 |
119.7 |
120.0 |
| CG |
CD |
OE1 |
OE2 |
240.0 |
240.0 |
| HD2 |
CD |
OE1 |
OE2 |
120.3 |
120.0 |
| OE1 |
CD |
OE2 |
HE2 |
59.5 |
60.0 |
| HD2 |
CD |
CG |
HG2 |
301.9 |
295.0 |
| HD2 |
CD |
CG |
HG3 |
181.9 |
175.0 |
| CG |
CD |
HD2 |
OE1 |
239.6 |
240.0 |
| CG |
CD |
HD2 |
OE2 |
119.8 |
120.1 |
| OE1 |
CD |
HD2 |
OE2 |
240.2 |
240.0 |
| HD2 |
CD |
OE1 |
HE1 |
60.3 |
180.0 |
| HD2 |
CD |
OE2 |
HE2 |
299.7 |
300.0 |
| OE2 |
CD |
CG |
HG2 |
62.2 |
55.1 |
| OE2 |
CD |
CG |
HG3 |
302.1 |
295.1 |
| CG |
CD |
OE2 |
OE1 |
120.5 |
119.9 |
| CG |
CD |
OE2 |
HD2 |
240.3 |
239.9 |
| OE1 |
CD |
OE2 |
HD2 |
119.8 |
120.0 |
| OE2 |
CD |
OE1 |
HE1 |
300.0 |
60.0 |
| HE1 |
OE1 |
CD |
HD2 |
60.3 |
180.0 |
| HE1 |
OE1 |
CD |
OE2 |
300.0 |
60.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |
| H2 |
N |
CA |
C |
300.0 |
184.0 |
| H2 |
N |
CA |
CB |
173.4 |
63.9 |
| H2 |
N |
CA |
HA |
55.6 |
304.0 |
| OXT |
C |
CA |
CB |
333.6 |
280.0 |
| OXT |
C |
CA |
HA |
90.8 |
40.0 |
| CA |
C |
OXT |
O |
180.0 |
180.0 |