PDB Chemical Component GLC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GLC

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.525 1.531
C1 O1 1.350 1.428
C1 O5 1.369 1.429
C1 H1 1.100 1.090
C2 C3 1.505 1.532
C2 O2 1.415 1.429
C2 H2 1.100 1.091
C3 C4 1.497 1.532
C3 O3 1.444 1.429
C3 H3 1.100 1.090
C4 C5 1.563 1.530
C4 O4 1.463 1.429
C4 H4 1.100 1.091
C5 C6 1.543 1.530
C5 O5 1.406 1.429
C5 H5 1.100 1.091
C6 O6 1.443 1.429
C6 H61 1.100 1.089
C6 H62 1.100 1.090
O1 HO1 0.950 0.968
O2 HO2 0.950 0.967
O3 HO3 0.950 0.967
O4 HO4 0.950 0.967
O6 HO6 0.951 0.967

Bond Angles for GLC

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 110.1 109.5
C2 C1 O5 116.8 109.4
C2 C1 H1 101.3 109.4
C1 C2 C3 110.8 109.2
C1 C2 O2 109.0 109.5
C1 C2 H2 108.5 109.6
O1 C1 O5 98.7 109.5
O1 C1 H1 118.7 109.5
C1 O1 HO1 109.5 114.0
O5 C1 H1 112.2 109.5
C1 O5 C5 125.4 114.1
C3 C2 O2 108.2 109.5
C3 C2 H2 109.3 109.5
C2 C3 C4 110.2 109.0
C2 C3 O3 106.6 109.5
C2 C3 H3 110.5 109.5
O2 C2 H2 111.1 109.6
C2 O2 HO2 109.5 114.0
C4 C3 O3 108.4 109.6
C4 C3 H3 108.8 109.6
C3 C4 C5 109.3 109.2
C3 C4 O4 108.3 109.5
C3 C4 H4 108.7 109.5
O3 C3 H3 112.2 109.6
C3 O3 HO3 109.5 114.0
C5 C4 O4 103.9 109.6
C5 C4 H4 112.7 109.5
C4 C5 C6 111.2 109.5
C4 C5 O5 110.0 109.4
C4 C5 H5 108.2 109.5
O4 C4 H4 113.7 109.6
C4 O4 HO4 109.5 114.0
C6 C5 O5 110.3 109.5
C6 C5 H5 107.9 109.5
C5 C6 O6 102.6 109.5
C5 C6 H61 111.8 109.5
C5 C6 H62 113.3 109.5
O5 C5 H5 109.2 109.4
O6 C6 H61 111.9 109.4
O6 C6 H62 113.3 109.5
C6 O6 HO6 109.5 114.1
H61 C6 H62 104.3 109.5

Torsion Angles for GLC

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 248.6 240.0
O1 C1 C2 H1 126.4 120.0
C2 C1 O1 HO1 12.7 180.0
O5 C1 C2 H1 237.8 240.0
C2 C1 O5 C5 331.7 298.8
C3 C2 C1 O2 241.1 240.1
C3 C2 C1 H2 120.0 119.9
C1 C2 C3 C4 306.4 303.0
C1 C2 C3 O3 189.0 183.2
C1 C2 C3 H3 66.8 62.9
O2 C2 C1 H2 238.9 239.8
C1 C2 O2 HO2 193.6 60.1
C2 C1 O1 O5 122.8 120.0
C2 C1 O1 H1 244.1 240.0
O1 C1 C2 C3 283.6 297.6
O1 C1 C2 O2 42.5 57.5
O1 C1 C2 H2 163.6 177.7
O5 C1 O1 H1 121.3 120.1
O1 C1 O5 C5 89.5 58.8
C2 C1 O5 O1 242.2 240.0
C2 C1 O5 H1 116.3 119.9
O5 C1 C2 C3 35.0 57.6
O5 C1 C2 O2 153.9 177.5
O5 C1 C2 H2 275.1 297.7
O1 C1 O5 H1 234.1 239.9
O5 C1 O1 HO1 249.8 60.1
C4 C5 O5 C1 35.5 61.1
C6 C5 O5 C1 158.5 181.2
C1 O5 C5 H5 276.9 301.2
C2 C1 H1 O1 120.5 120.0
C2 C1 H1 O5 234.7 240.1
H1 C1 C2 C3 157.2 177.6
H1 C1 C2 O2 276.1 297.5
H1 C1 C2 H2 37.2 57.7
O1 C1 H1 O5 114.2 120.1
H1 C1 O1 HO1 128.6 300.0
H1 C1 O5 C5 215.4 178.9
C3 C2 C1 O1 283.6 297.6
C3 C2 C1 O5 35.0 57.6
C3 C2 C1 H1 157.2 177.6
C1 C2 C3 O2 119.4 119.9
C1 C2 C3 H2 240.5 240.1
O2 C2 C3 H2 121.1 120.2
C3 C2 O2 HO2 314.2 179.8
C4 C3 C2 O3 117.5 119.9
C4 C3 C2 H3 239.7 240.1
C2 C3 C4 C5 62.4 56.9
C2 C3 C4 O4 175.0 176.9
C2 C3 C4 H4 299.0 297.1
O3 C3 C2 H3 122.2 120.3
C2 C3 O3 HO3 8.0 300.0
O2 C2 C1 O1 42.5 57.5
O2 C2 C1 O5 153.9 177.5
O2 C2 C1 H1 276.1 297.5
C1 C2 O2 C3 239.5 240.3
C1 C2 O2 H2 119.5 120.2
C3 C2 O2 H2 240.0 239.9
O2 C2 C3 C4 187.1 183.1
O2 C2 C3 O3 69.6 63.3
O2 C2 C3 H3 307.4 303.0
H2 C2 C1 O1 163.6 177.7
H2 C2 C1 O5 275.1 297.7
H2 C2 C1 H1 37.2 57.7
C1 C2 H2 C3 120.9 119.7
C1 C2 H2 O2 240.2 239.8
C3 C2 H2 O2 119.3 120.1
H2 C2 C3 C4 65.9 63.0
H2 C2 C3 O3 308.5 303.1
H2 C2 C3 H3 186.3 182.8
H2 C2 O2 HO2 74.1 299.9
C4 C3 C2 O2 187.1 183.1
C4 C3 C2 H2 65.9 63.0
C2 C3 C4 O3 243.6 240.1
C2 C3 C4 H3 121.3 119.8
O3 C3 C4 H3 237.7 239.7
C4 C3 O3 HO3 249.4 180.4
C5 C4 C3 O4 247.4 240.0
C5 C4 C3 H4 123.4 119.9
C3 C4 C5 C6 186.8 182.4
C3 C4 C5 O5 309.3 302.4
C3 C4 C5 H5 68.5 62.4
O4 C4 C3 H4 236.0 239.8
C3 C4 O4 HO4 54.1 60.0
O3 C3 C2 O2 69.6 63.3
O3 C3 C2 H2 308.5 303.1
C2 C3 O3 C4 118.6 119.6
C2 C3 O3 H3 238.8 239.8
C4 C3 O3 H3 120.2 120.3
O3 C3 C4 C5 178.8 176.8
O3 C3 C4 O4 291.4 296.8
O3 C3 C4 H4 55.4 56.9
H3 C3 C2 O2 307.4 303.0
H3 C3 C2 H2 186.3 182.8
C2 C3 H3 C4 238.9 240.5
C2 C3 H3 O3 118.9 120.2
C4 C3 H3 O3 240.0 239.7
H3 C3 C4 C5 301.1 297.1
H3 C3 C4 O4 53.7 57.1
H3 C3 C4 H4 177.7 177.3
H3 C3 O3 HO3 129.2 60.1
C1 O5 C5 C4 35.5 61.1
C5 C4 C3 O3 178.8 176.8
C5 C4 C3 H3 301.1 297.1
C3 C4 C5 O4 115.4 119.9
C3 C4 C5 H4 239.0 240.1
O4 C4 C5 H4 123.6 120.2
C5 C4 O4 HO4 170.3 179.7
C6 C5 C4 O5 237.6 240.0
C6 C5 C4 H5 118.4 120.0
C4 C5 C6 O6 189.9 185.0
C4 C5 C6 H61 309.9 305.0
C4 C5 C6 H62 67.4 65.0
O5 C5 C4 H5 240.8 240.0
O4 C4 C3 O3 291.4 296.8
O4 C4 C3 H3 53.7 57.1
C3 C4 O4 C5 243.8 240.3
C3 C4 O4 H4 120.9 120.1
C5 C4 O4 H4 237.1 239.8
O4 C4 C5 C6 71.4 62.5
O4 C4 C5 O5 193.8 182.5
O4 C4 C5 H5 313.0 302.4
H4 C4 C3 O3 55.4 56.9
H4 C4 C3 H3 177.7 177.3
C3 C4 H4 C5 121.4 119.7
C3 C4 H4 O4 239.3 239.9
C5 C4 H4 O4 118.0 120.2
H4 C4 C5 C6 307.8 302.3
H4 C4 C5 O5 70.3 62.3
H4 C4 C5 H5 189.5 182.2
H4 C4 O4 HO4 293.2 299.9
C1 O5 C5 C6 158.5 181.2
C6 C5 C4 O4 71.4 62.5
C6 C5 C4 H4 307.8 302.3
C4 C5 C6 O5 122.3 120.0
C4 C5 C6 H5 241.5 240.0
O5 C5 C6 H5 119.2 120.0
O6 C6 C5 H61 240.0 240.0
O6 C6 C5 H62 122.5 120.0
C5 C6 O6 HO6 99.2 180.1
H61 C6 C5 H62 242.5 240.0
C5 O5 C1 H1 215.4 178.9
O5 C5 C4 O4 193.8 182.5
O5 C5 C4 H4 70.3 62.3
C4 C5 O5 C6 237.0 240.0
C4 C5 O5 H5 118.6 120.0
C6 C5 O5 H5 241.6 240.0
O5 C5 C6 O6 67.6 65.0
O5 C5 C6 H61 187.6 185.0
O5 C5 C6 H62 305.1 305.0
H5 C5 C4 O4 313.0 302.4
H5 C5 C4 H4 189.5 182.2
C4 C5 H5 C6 120.4 120.0
C4 C5 H5 O5 240.3 240.0
C6 C5 H5 O5 119.9 120.0
H5 C5 C6 O6 308.4 305.1
H5 C5 C6 H61 68.4 65.1
H5 C5 C6 H62 185.9 185.1
O6 C6 C5 O5 67.6 65.0
O6 C6 C5 H5 308.4 305.1
C5 C6 O6 H61 120.0 120.0
C5 C6 O6 H62 237.5 240.0
H61 C6 O6 H62 117.5 119.9
H61 C6 C5 O5 187.6 185.0
H61 C6 C5 H5 68.4 65.1
C5 C6 H61 O6 245.6 240.0
C5 C6 H61 H62 122.8 120.0
O6 C6 H61 H62 237.2 240.1
H61 C6 O6 HO6 339.2 60.0
H62 C6 C5 O5 305.1 305.0
H62 C6 C5 H5 185.9 185.1
C5 C6 H62 O6 116.3 120.0
C5 C6 H62 H61 238.2 240.0
O6 C6 H62 H61 121.9 119.9
H62 C6 O6 HO6 221.7 300.1
HO1 O1 C1 O5 249.8 60.1
HO1 O1 C1 H1 128.6 300.0
HO2 O2 C2 H2 74.1 299.9
HO3 O3 C3 H3 129.2 60.1
HO4 O4 C4 H4 293.2 299.9
HO6 O6 C6 H61 339.2 60.0
HO6 O6 C6 H62 221.7 300.1