PDB Chemical Component GLA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GLA

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.514 1.530
C1 O1 1.405 1.429
C1 O5 1.451 1.425
C1 H1 1.114 1.090
C2 C3 1.514 1.532
C2 O2 1.460 1.429
C2 H2 1.115 1.089
C3 C4 1.561 1.533
C3 O3 1.410 1.429
C3 H3 1.115 1.090
C4 C5 1.502 1.530
C4 O4 1.470 1.428
C4 H4 1.115 1.090
C5 C6 1.531 1.530
C5 O5 1.415 1.425
C5 H5 1.116 1.090
C6 O6 1.391 1.428
C6 H61 1.116 1.089
C6 H62 1.115 1.090
O1 HO1 0.950 0.967
O2 HO2 0.950 0.968
O3 HO3 0.951 0.967
O4 HO4 0.950 0.966
O6 HO6 0.950 0.967

Bond Angles for GLA

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 109.6 109.4
C2 C1 O5 109.6 109.8
C2 C1 H1 109.1 109.4
C1 C2 C3 112.4 109.0
C1 C2 O2 109.7 109.6
C1 C2 H2 107.6 109.5
O1 C1 O5 108.7 109.4
O1 C1 H1 109.9 109.4
C1 O1 HO1 109.6 106.8
O5 C1 H1 110.0 109.4
C1 O5 C5 116.8 107.7
C3 C2 O2 110.2 109.6
C3 C2 H2 107.0 109.6
C2 C3 C4 109.8 108.6
C2 C3 O3 110.6 109.6
C2 C3 H3 108.7 109.7
O2 C2 H2 109.8 109.5
C2 O2 HO2 109.7 106.8
C4 C3 O3 109.8 109.7
C4 C3 H3 109.4 109.6
C3 C4 C5 109.1 109.0
C3 C4 O4 108.9 109.5
C3 C4 H4 111.6 109.6
O3 C3 H3 108.6 109.6
C3 O3 HO3 110.6 106.8
C5 C4 O4 113.9 109.7
C5 C4 H4 106.6 109.5
C4 C5 C6 108.2 109.4
C4 C5 O5 111.6 109.8
C4 C5 H5 107.9 109.4
O4 C4 H4 106.7 109.5
C4 O4 HO4 108.9 106.9
C6 C5 O5 106.6 109.4
C6 C5 H5 112.9 109.4
C5 C6 O6 104.0 109.5
C5 C6 H61 114.3 109.5
C5 C6 H62 114.3 109.5
O5 C5 H5 109.6 109.4
O6 C6 H61 114.3 109.5
O6 C6 H62 114.3 109.4
C6 O6 HO6 104.0 106.9
H61 C6 H62 96.2 109.5

Torsion Angles for GLA

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 240.8 239.9
O1 C1 C2 H1 120.4 119.8
C2 C1 O1 HO1 180.0 180.3
O5 C1 C2 H1 239.6 239.9
C2 C1 O5 C5 305.7 292.4
C3 C2 C1 O2 237.0 240.1
C3 C2 C1 H2 117.6 119.9
C1 C2 C3 C4 305.9 306.2
C1 C2 C3 O3 184.6 186.4
C1 C2 C3 H3 65.5 66.0
O2 C2 C1 H2 240.6 239.8
C1 C2 O2 HO2 180.0 60.0
C2 C1 O1 O5 119.7 120.3
C2 C1 O1 H1 240.1 240.2
O1 C1 C2 C3 292.9 301.2
O1 C1 C2 O2 55.9 61.1
O1 C1 C2 H2 175.3 181.3
O5 C1 O1 H1 120.4 119.9
O1 C1 O5 C5 65.4 52.5
C2 C1 O5 O1 240.3 240.0
C2 C1 O5 H1 119.9 120.1
O5 C1 C2 C3 52.0 61.3
O5 C1 C2 O2 175.0 181.2
O5 C1 C2 H2 294.5 301.3
O1 C1 O5 H1 239.6 240.2
O5 C1 O1 HO1 60.3 60.0
C4 C5 O5 C1 57.5 67.6
C6 C5 O5 C1 175.5 187.7
C1 O5 C5 H5 298.0 307.6
C2 C1 H1 O1 120.2 119.8
C2 C1 H1 O5 239.8 239.7
H1 C1 C2 C3 172.5 181.4
H1 C1 C2 O2 295.5 301.3
H1 C1 C2 H2 54.9 61.5
O1 C1 H1 O5 119.6 119.9
H1 C1 O1 HO1 299.8 300.1
H1 C1 O5 C5 185.8 172.3
C3 C2 C1 O1 292.9 301.2
C3 C2 C1 O5 52.0 61.3
C3 C2 C1 H1 172.5 181.4
C1 C2 C3 O2 122.7 119.9
C1 C2 C3 H2 242.1 240.2
O2 C2 C3 H2 119.4 120.3
C3 C2 O2 HO2 304.3 179.6
C4 C3 C2 O3 121.3 119.8
C4 C3 C2 H3 240.4 240.2
C2 C3 C4 C5 54.4 53.8
C2 C3 C4 O4 289.5 293.8
C2 C3 C4 H4 171.9 173.6
O3 C3 C2 H3 119.1 120.4
C2 C3 O3 HO3 180.0 300.0
O2 C2 C1 O1 55.9 61.1
O2 C2 C1 O5 175.0 181.2
O2 C2 C1 H1 295.5 301.3
C1 C2 O2 C3 235.8 240.5
C1 C2 O2 H2 118.1 120.1
C3 C2 O2 H2 242.3 239.7
O2 C2 C3 C4 183.2 186.3
O2 C2 C3 O3 61.9 66.5
O2 C2 C3 H3 302.8 306.1
H2 C2 C1 O1 175.3 181.3
H2 C2 C1 O5 294.5 301.3
H2 C2 C1 H1 54.9 61.5
C1 C2 H2 C3 121.0 119.5
C1 C2 H2 O2 240.6 239.8
C3 C2 H2 O2 119.7 120.3
H2 C2 C3 C4 63.8 66.1
H2 C2 C3 O3 302.5 306.2
H2 C2 C3 H3 183.4 185.9
H2 C2 O2 HO2 62.0 299.9
C4 C3 C2 O2 183.2 186.3
C4 C3 C2 H2 63.8 66.1
C2 C3 C4 O3 238.2 240.3
C2 C3 C4 H3 119.2 119.8
O3 C3 C4 H3 240.9 239.6
C4 C3 O3 HO3 58.7 180.8
C5 C4 C3 O4 124.8 120.0
C5 C4 C3 H4 242.5 240.2
C3 C4 C5 C6 187.9 178.6
C3 C4 C5 O5 304.9 298.7
C3 C4 C5 H5 65.4 58.7
O4 C4 C3 H4 117.6 120.2
C3 C4 O4 HO4 180.0 299.9
O3 C3 C2 O2 61.9 66.5
O3 C3 C2 H2 302.5 306.2
C2 C3 O3 C4 121.3 119.2
C2 C3 O3 H3 240.9 239.6
C4 C3 O3 H3 119.6 120.4
O3 C3 C4 C5 176.2 173.6
O3 C3 C4 O4 51.3 53.5
O3 C3 C4 H4 293.7 293.3
H3 C3 C2 O2 302.8 306.1
H3 C3 C2 H2 183.4 185.9
C2 C3 H3 C4 240.2 240.8
C2 C3 H3 O3 120.3 120.3
C4 C3 H3 O3 240.2 239.5
H3 C3 C4 C5 295.2 294.0
H3 C3 C4 O4 170.4 174.0
H3 C3 C4 H4 52.7 53.8
H3 C3 O3 HO3 299.1 60.4
C1 O5 C5 C4 57.5 67.6
C5 C4 C3 O3 176.2 173.6
C5 C4 C3 H3 295.2 294.0
C3 C4 C5 O4 238.1 240.1
C3 C4 C5 H4 120.7 119.8
O4 C4 C5 H4 242.6 239.8
C5 C4 O4 HO4 58.0 180.3
C6 C5 C4 O5 243.0 239.9
C6 C5 C4 H5 122.5 119.8
C4 C5 C6 O6 192.3 180.2
C4 C5 C6 H61 317.6 60.2
C4 C5 C6 H62 67.0 300.2
O5 C5 C4 H5 239.5 240.0
O4 C4 C3 O3 51.3 53.5
O4 C4 C3 H3 170.4 174.0
C3 C4 O4 C5 122.0 119.6
C3 C4 O4 H4 239.3 239.8
C5 C4 O4 H4 117.3 120.2
O4 C4 C5 C6 309.8 298.5
O4 C4 C5 O5 66.8 58.6
O4 C4 C5 H5 187.3 178.7
H4 C4 C3 O3 293.7 293.3
H4 C4 C3 H3 52.7 53.8
C3 C4 H4 C5 240.9 240.5
C3 C4 H4 O4 118.9 120.2
C5 C4 H4 O4 238.0 239.7
H4 C4 C5 C6 67.2 58.7
H4 C4 C5 O5 184.2 178.9
H4 C4 C5 H5 304.7 298.9
H4 C4 O4 HO4 300.7 60.1
C1 O5 C5 C6 175.5 187.7
C6 C5 C4 O4 309.8 298.5
C6 C5 C4 H4 67.2 58.7
C4 C5 C6 O5 120.2 120.3
C4 C5 C6 H5 240.6 240.2
O5 C5 C6 H5 120.4 119.9
O6 C6 C5 H61 234.7 120.0
O6 C6 C5 H62 125.3 240.0
C5 C6 O6 HO6 180.0 180.0
H61 C6 C5 H62 250.6 120.0
C5 O5 C1 H1 185.8 172.3
O5 C5 C4 O4 66.8 58.6
O5 C5 C4 H4 184.2 178.9
C4 C5 O5 C6 242.0 239.9
C4 C5 O5 H5 119.5 120.0
C6 C5 O5 H5 237.5 240.1
O5 C5 C6 O6 72.1 59.9
O5 C5 C6 H61 197.4 299.9
O5 C5 C6 H62 306.8 179.9
H5 C5 C4 O4 187.3 178.7
H5 C5 C4 H4 304.7 298.9
C4 C5 H5 C6 119.6 119.8
C4 C5 H5 O5 238.3 239.7
C6 C5 H5 O5 118.7 119.9
H5 C5 C6 O6 311.7 300.0
H5 C5 C6 H61 77.0 180.0
H5 C5 C6 H62 186.4 60.0
O6 C6 C5 O5 72.1 59.9
O6 C6 C5 H5 311.7 300.0
C5 C6 O6 H61 125.3 240.0
C5 C6 O6 H62 234.7 120.0
H61 C6 O6 H62 109.4 240.0
H61 C6 C5 O5 197.4 299.9
H61 C6 C5 H5 77.0 180.0
C5 C6 H61 O6 240.3 120.0
C5 C6 H61 H62 120.1 240.0
O6 C6 H61 H62 239.8 120.0
H61 C6 O6 HO6 54.7 300.0
H62 C6 C5 O5 306.8 179.9
H62 C6 C5 H5 186.4 60.0
C5 C6 H62 O6 119.7 240.0
C5 C6 H62 H61 239.9 120.0
O6 C6 H62 H61 120.1 240.0
H62 C6 O6 HO6 305.3 60.0
HO1 O1 C1 O5 60.3 60.0
HO1 O1 C1 H1 299.8 300.1
HO2 O2 C2 H2 62.0 299.9
HO3 O3 C3 H3 299.1 60.4
HO4 O4 C4 H4 300.7 60.1
HO6 O6 C6 H61 54.7 300.0
HO6 O6 C6 H62 305.3 60.0