PDB Chemical Component GJ7

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GJ7

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O26 C27 1.264 1.216
C31 C30 1.403 1.369
C31 C32 1.401 1.404
C30 C29 1.412 1.394
O3 C4 1.221 1.213
C1 C2 1.583 1.531
C6 C7 1.530 1.560
C6 N11 1.471 1.483
C27 C32 1.520 1.471
C27 N25 1.420 1.348
C32 C33 1.487 1.404
C4 C2 1.547 1.506
C4 N8 1.370 1.349
C29 N11 1.420 1.385
C29 N34 1.374 1.325
C7 N8 1.490 1.493
C7 C5 1.513 1.570
N11 C10 1.449 1.497
N8 C9 1.477 1.479
C33 N34 1.366 1.322
C33 O28 1.390 1.354
C9 C10 1.546 1.560
C5 C10 1.530 1.571
O28 C24 1.398 1.359
C24 C19 1.394 1.387
C24 C23 1.407 1.387
C19 C20 1.416 1.381
C23 C22 1.420 1.382
C20 C21 1.404 1.388
C22 C21 1.404 1.387
C21 O18 1.418 1.359
C12 C13 1.436 1.381
C12 C17 1.406 1.387
O18 C17 1.403 1.359
C13 C14 1.409 1.383
C17 C16 1.400 1.388
C14 C15 1.405 1.383
C16 C15 1.410 1.381
C1 H1 1.100 1.090
C1 H2 1.100 1.090
C1 H3 1.100 1.090
C2 H4 1.100 1.089
C2 H5 1.100 1.090
C7 H6 1.100 1.090
C9 H7 1.100 1.089
C9 H8 1.100 1.090
C10 H9 1.100 1.090
C12 H10 1.080 1.080
C13 H11 1.080 1.080
C14 H12 1.079 1.080
C15 H13 1.080 1.080
C16 H14 1.080 1.080
C19 H15 1.080 1.080
C20 H16 1.080 1.079
C22 H17 1.081 1.080
N25 H18 1.000 0.970
N25 H19 1.000 0.971
C30 H20 1.080 1.080
C31 H21 1.080 1.080
C5 H22 1.100 1.090
C5 H23 1.100 1.090
C6 H24 1.100 1.089
C6 H25 1.100 1.090
C23 H26 1.080 1.079

Bond Angles for GJ7

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C31 C30 C29 120.3 119.5
C31 C30 H20 119.9 120.3
C27 C32 C31 119.4 120.5
C31 C32 C33 118.0 118.9
C32 C31 H21 120.2 120.7
C30 C29 N11 119.5 119.5
C30 C29 N34 121.5 121.0
C29 C30 H20 119.8 120.2
O3 C4 N8 121.5 120.0
C2 C1 H1 109.5 109.4
C2 C1 H2 109.5 109.5
C2 C1 H3 109.5 109.4
C1 C2 H4 108.3 109.5
C1 C2 H5 108.2 109.4
C6 C7 N8 102.3 104.1
C6 C7 H6 115.9 116.8
N11 C6 H24 111.7 110.3
N11 C6 H25 111.7 110.3
C27 C32 C33 122.5 120.6
C27 N25 H18 120.0 120.0
C27 N25 H19 120.0 120.0
C32 C33 N34 120.5 120.4
C4 C2 H4 108.2 109.5
C4 C2 H5 108.3 109.4
C7 N8 C4 125.0 126.9
C33 N34 C29 120.0 121.6
C5 C7 N8 100.5 101.0
C7 N8 C9 106.8 106.2
N8 C7 H6 116.7 116.2
C7 C5 C10 96.0 94.3
C5 C7 H6 116.3 116.5
C7 C5 H22 112.7 112.4
C7 C5 H23 112.8 112.3
N11 C10 H9 118.0 116.8
N8 C9 H7 111.0 110.4
N8 C9 H8 111.0 110.4
C10 C9 H7 111.0 110.3
C10 C9 H8 111.0 110.3
C9 C10 H9 116.1 116.3
C5 C10 H9 116.4 116.5
O28 C24 C23 118.8 120.0
C24 C19 H15 120.3 120.0
C24 C23 H26 119.7 120.1
C19 C20 C21 121.4 120.0
C20 C19 H15 120.3 120.0
C19 C20 H16 119.3 120.0
C23 C22 H17 120.1 120.0
C20 C21 O18 121.3 120.0
C21 C20 H16 119.3 120.0
C22 C21 O18 119.7 120.0
C21 O18 C17 119.2 117.9
C13 C12 C17 121.1 120.0
C12 C13 C14 119.9 120.1
C13 C12 H10 119.4 120.0
C12 C13 H11 120.0 120.0
C12 C17 C16 117.6 119.9
C17 C12 H10 119.4 120.0
C13 C14 C15 118.7 120.1
C14 C13 H11 120.0 119.9
C13 C14 H12 120.7 120.0
C17 C16 H14 119.0 120.1
C15 C14 H12 120.7 120.0
C14 C15 H13 119.7 120.0
C16 C15 H13 119.7 120.0
H1 C1 H2 109.4 109.5
H1 C1 H3 109.4 109.5
H2 C1 H3 109.4 109.5
H4 C2 H5 109.5 109.5
H7 C9 H8 109.5 110.3
H18 N25 H19 120.0 120.0
H22 C5 H23 109.4 112.0
H24 C6 H25 109.5 110.4

Torsion Angles for GJ7

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O26 C27 N25 H18 0.0 180.0
O26 C27 N25 H19 180.0 360.0
C27 C32 C31 C30 179.0 180.0
C31 C30 C29 N11 182.0 179.7
C31 C30 C29 N34 1.8 0.1
C29 C30 C31 H20 180.0 180.2
C32 C31 C30 C29 358.3 359.9
C32 C31 C30 H20 178.3 179.8
C27 C32 C31 C33 178.2 180.0
C31 C32 C33 N34 360.0 0.1
C31 C30 C29 H20 180.0 179.8
C33 N34 C29 C30 359.0 359.9
O3 C4 C2 H4 264.9 240.1
O3 C4 C2 H5 146.3 120.0
C7 N8 C4 O3 2.2 360.0
C4 C2 C1 H4 239.3 239.9
C4 C2 C1 H5 120.7 119.9
H1 C1 C2 H2 240.0 240.0
H1 C1 C2 H3 120.0 120.0
H2 C1 C2 H3 240.0 240.0
H4 C2 C1 H5 241.4 240.0
C6 C7 N8 C4 254.6 246.9
C5 C7 C6 N8 103.9 104.1
C6 C7 N8 C9 72.4 66.9
N8 C7 C6 H6 128.2 129.5
C5 C7 C6 H6 232.1 233.6
C6 C7 C5 H22 66.3 64.1
C6 C7 C5 H23 190.9 191.6
C30 C29 N11 C6 352.2 35.8
N11 C6 C7 N8 284.6 288.8
N11 C6 C7 H6 156.4 159.3
C6 N11 C10 H9 195.6 196.4
H24 C6 N11 H25 123.0 122.2
C31 C32 C27 C33 181.9 180.0
C27 C32 C31 H21 359.0 0.0
C32 C27 N25 H18 176.2 0.0
C32 C27 N25 H19 356.2 180.0
C27 C32 C33 N34 181.8 180.0
H18 N25 C27 H19 180.0 180.0
C27 C32 C33 C31 181.9 180.0
C33 C32 C31 H21 180.8 180.0
C32 C33 N34 C29 0.1 360.0
C4 C2 C1 H1 180.0 299.9
C4 C2 C1 H2 300.0 59.9
C4 C2 C1 H3 60.0 180.0
C1 C2 C4 H4 120.7 120.0
C1 C2 C4 H5 239.3 240.1
H4 C2 C4 H5 118.6 120.1
N8 C4 C2 H4 85.4 60.0
N8 C4 C2 H5 326.8 299.9
C5 C7 N8 C4 149.0 143.9
C7 N8 C4 C9 177.3 180.0
C4 N8 C7 H6 22.3 16.8
C4 N8 C9 H7 295.2 63.0
C4 N8 C9 H8 57.2 300.8
C30 C29 N11 N34 179.8 180.3
N11 C29 C30 H20 2.0 359.9
C29 N11 C6 H24 68.3 3.7
C29 N11 C6 H25 305.3 241.5
C33 N34 C29 N11 178.8 180.3
C29 N11 C10 H9 15.8 75.8
C30 C29 N34 N11 180.2 179.6
N34 C29 C30 H20 181.8 180.3
O3 C4 N8 C7 2.2 360.0
C6 C7 N8 H6 232.3 230.1
N8 C7 C5 C10 53.9 54.4
C5 C7 N8 H6 126.7 127.0
N8 C7 C5 H22 171.7 170.7
N8 C7 C5 H23 296.2 298.1
C7 N8 C9 H7 117.5 243.1
C7 N8 C9 H8 239.6 120.8
C6 C7 C5 N8 254.7 253.4
C6 C7 C5 H6 127.7 126.6
C5 C7 N8 C9 326.8 323.8
N8 C7 C5 H6 233.0 233.2
C7 C5 C10 H9 180.3 182.1
H22 C5 C7 H23 235.5 232.6
N11 C10 C9 H7 175.0 47.7
N11 C10 C9 H8 53.0 169.8
C9 C10 N11 H9 227.6 230.4
C5 C10 N11 H9 125.5 127.4
C7 N8 C9 C4 182.3 180.0
C9 N8 C7 H6 200.1 196.8
C10 C9 N8 H7 241.0 118.9
C10 C9 N8 H8 119.0 241.1
N8 C9 C10 H9 160.6 158.9
H7 C9 N8 H8 238.0 122.2
C30 C29 N34 C33 359.0 359.9
C27 C32 C33 O28 4.9 360.0
C33 O28 C24 C23 215.0 77.3
C7 N8 C9 C10 358.5 2.0
C7 C5 C10 C9 305.6 308.1
N11 C10 C9 H9 133.4 129.9
N8 C9 C10 H7 119.0 241.1
N8 C9 C10 H8 241.0 119.0
C5 C10 C9 H9 234.5 233.9
H7 C9 C10 H8 122.0 237.9
C10 C5 C7 N8 53.9 54.4
C10 C5 C7 H6 180.9 181.2
C7 C5 C10 H22 117.7 116.3
C7 C5 C10 H23 242.3 243.7
N11 C10 C5 H9 233.4 232.5
C5 C10 C9 H7 276.1 151.7
C5 C10 C9 H8 154.1 273.8
C9 C10 C5 H9 125.3 125.9
O28 C24 C19 H15 355.0 0.3
O28 C24 C23 H26 4.7 359.5
C20 C19 C24 H15 180.0 179.8
C24 C19 C20 H16 178.5 180.2
C23 C24 C19 H15 181.4 179.8
C24 C23 C22 H17 181.8 179.8
C24 C19 C20 H15 180.0 180.2
C19 C20 C21 O18 180.1 180.0
C21 C20 C19 H16 180.0 180.0
C21 C20 C19 H15 178.5 180.0
C19 C20 C21 H16 180.0 180.0
C22 C21 C20 O18 181.5 180.0
C20 C21 O18 C17 77.3 357.2
C20 C21 C22 O18 178.5 180.0
C22 C21 C20 H16 181.6 180.0
C22 C21 O18 C17 255.8 177.2
O18 C21 C20 H16 0.1 0.0
C13 C12 C17 C16 0.0 0.0
C17 C12 C13 H10 180.0 180.3
C12 C13 C14 C15 358.9 359.9
C14 C13 C12 H11 180.0 180.1
C12 C13 C14 H12 178.9 180.0
C21 O18 C17 C12 6.5 79.0
C17 C12 C13 C14 0.8 0.0
C13 C12 C17 H10 180.0 179.7
C17 C12 C13 H11 180.8 179.9
C12 C17 C16 H14 179.5 180.0
O18 C17 C12 H10 0.7 0.2
O18 C17 C16 H14 358.9 0.1
C14 C13 C12 C17 0.8 0.0
C14 C13 C12 H10 180.8 179.7
C12 C13 C14 H11 180.0 179.9
C15 C14 C13 H12 180.0 179.9
C13 C14 C15 H13 180.7 179.9
C16 C17 C12 H10 180.0 180.3
C17 C16 C15 H13 180.1 180.1
C15 C14 C13 H11 178.8 180.0
C13 C14 C15 H12 180.0 180.1
C16 C15 C14 H13 180.0 180.1
C12 C17 C16 C15 359.5 360.0
C16 C15 C14 H12 180.7 180.0
C14 C15 C16 H13 180.0 179.9
C2 C1 H1 H2 120.1 120.0
C2 C1 H1 H3 240.0 240.1
H1 C1 C2 H4 300.7 60.0
H1 C1 C2 H5 59.3 180.0
H2 C1 H1 H3 119.9 120.1
C2 C1 H2 H1 239.9 240.0
C2 C1 H2 H3 120.0 120.0
H2 C1 C2 H4 60.7 180.0
H2 C1 C2 H5 179.3 300.0
H1 C1 H2 H3 240.1 240.0
C2 C1 H3 H1 120.1 119.9
C2 C1 H3 H2 240.0 240.0
H3 C1 C2 H4 180.7 300.0
H3 C1 C2 H5 299.3 60.0
H1 C1 H3 H2 119.9 120.1
H4 C2 C1 H1 300.7 60.0
H4 C2 C1 H2 60.7 180.0
H4 C2 C1 H3 180.7 300.0
C1 C2 H4 H5 117.8 120.0
C4 C2 H4 H5 242.2 240.0
H5 C2 C1 H1 59.3 180.0
H5 C2 C1 H2 179.3 300.0
H5 C2 C1 H3 299.3 60.0
C1 C2 H5 H4 242.2 240.0
C4 C2 H5 H4 117.8 120.1
C6 C7 H6 N8 120.7 123.6
H6 C7 N8 C4 22.3 16.8
C5 C7 H6 N8 241.6 241.1
H6 C7 N8 C9 200.1 196.8
H6 C7 C5 C10 180.9 181.2
H6 C7 C5 H22 298.6 297.5
H6 C7 C5 H23 63.2 64.9
N8 C9 H7 H8 122.9 237.7
C10 C9 H7 H8 237.1 122.1
H7 C9 C10 H9 41.6 277.8
N8 C9 H8 H7 237.1 122.2
C10 C9 H8 H7 122.9 237.9
H8 C9 C10 H9 279.6 39.9
H9 C10 C9 H7 41.6 277.8
H9 C10 C9 H8 279.6 39.9
C13 C12 H10 C17 180.0 180.3
H10 C12 C13 C14 180.8 179.7
H10 C12 C13 H11 0.8 359.7
H10 C12 C17 C16 180.0 180.3
H11 C13 C12 C17 180.8 179.9
C12 C13 H11 C14 180.0 180.1
H11 C13 C12 H10 0.8 359.7
H11 C13 C14 C15 178.8 180.0
H11 C13 C14 H12 358.8 0.1
C13 C14 H12 C15 180.0 179.9
H12 C14 C13 H11 358.8 0.1
H12 C14 C15 H13 0.7 359.9
H13 C15 C14 H12 0.7 359.9
H14 C16 C15 H13 0.1 0.1
H15 C19 C20 C21 178.5 180.0
H15 C19 C20 H16 358.5 360.0
C19 C20 H16 C21 180.0 180.0
H16 C20 C19 H15 358.5 360.0
H16 C20 C21 O18 0.1 0.0
H17 C22 C21 O18 359.7 359.9
C27 N25 H18 H19 180.0 180.0
C27 N25 H19 H18 180.0 180.0
C31 C30 H20 C29 180.0 180.2
H20 C30 C29 N11 2.0 359.9
H20 C30 C29 N34 181.8 180.3
H21 C31 C30 C29 178.3 179.9
H21 C31 C30 H20 358.3 359.7
H21 C31 C32 C33 180.8 180.0
H22 C5 C7 N8 171.7 170.7
C7 C5 H22 C10 252.7 255.1
H22 C5 C7 H6 298.6 297.5
C7 C5 H22 H23 126.3 127.6
H22 C5 C10 H9 62.5 65.8
H23 C5 C7 N8 296.2 298.1
C7 C5 H23 C10 107.3 104.8
H23 C5 C7 H6 63.2 64.9
C7 C5 H23 H22 233.7 232.4
H23 C5 C10 H9 298.0 298.4
H24 C6 C7 N8 43.2 47.7
H24 C6 C7 H6 275.0 278.2
N11 C6 H24 H25 235.7 237.8
H25 C6 C7 N8 166.1 169.9
H25 C6 C7 H6 37.9 40.4
N11 C6 H25 H24 124.3 122.2
H26 C23 C22 H17 1.8 0.3