PDB Chemical Component GHP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GHP
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.493 |
1.469 |
| N |
H |
1.001 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
C |
1.556 |
1.507 |
| CA |
C1 |
1.560 |
1.506 |
| CA |
HA |
1.100 |
1.090 |
| C |
O |
1.234 |
1.208 |
| C |
OXT |
1.339 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
| C1 |
C2 |
1.402 |
1.383 |
| C1 |
C6 |
1.404 |
1.383 |
| C2 |
C3 |
1.393 |
1.382 |
| C2 |
HC2 |
1.080 |
1.080 |
| C3 |
C4 |
1.390 |
1.387 |
| C3 |
H3 |
1.080 |
1.080 |
| C4 |
O4 |
1.367 |
1.360 |
| C4 |
C5 |
1.390 |
1.387 |
| O4 |
HO4 |
0.950 |
0.966 |
| C5 |
C6 |
1.391 |
1.381 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
H6 |
1.080 |
1.080 |
Bond Angles for GHP
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.4 |
111.1 |
| N |
CA |
C |
108.2 |
109.5 |
| N |
CA |
C1 |
117.1 |
109.5 |
| N |
CA |
HA |
106.0 |
109.4 |
| H |
N |
H2 |
109.5 |
110.9 |
| C |
CA |
C1 |
112.1 |
109.5 |
| C |
CA |
HA |
111.7 |
109.5 |
| CA |
C |
O |
122.1 |
120.0 |
| CA |
C |
OXT |
115.5 |
120.0 |
| C1 |
CA |
HA |
101.5 |
109.5 |
| CA |
C1 |
C2 |
119.0 |
119.9 |
| CA |
C1 |
C6 |
122.3 |
120.0 |
| O |
C |
OXT |
122.4 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| C2 |
C1 |
C6 |
118.6 |
120.1 |
| C1 |
C2 |
C3 |
120.7 |
120.1 |
| C1 |
C2 |
HC2 |
119.7 |
120.0 |
| C1 |
C6 |
C5 |
120.6 |
120.0 |
| C1 |
C6 |
H6 |
119.7 |
120.0 |
| C3 |
C2 |
HC2 |
119.7 |
120.0 |
| C2 |
C3 |
C4 |
119.8 |
119.9 |
| C2 |
C3 |
H3 |
120.1 |
120.0 |
| C4 |
C3 |
H3 |
120.1 |
120.0 |
| C3 |
C4 |
O4 |
120.4 |
120.1 |
| C3 |
C4 |
C5 |
120.3 |
119.9 |
| O4 |
C4 |
C5 |
119.2 |
120.0 |
| C4 |
O4 |
HO4 |
109.5 |
114.0 |
| C4 |
C5 |
C6 |
119.9 |
120.0 |
| C4 |
C5 |
H5 |
120.1 |
120.0 |
| C6 |
C5 |
H5 |
120.0 |
120.0 |
| C5 |
C6 |
H6 |
119.7 |
120.0 |
Torsion Angles for GHP
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| C |
CA |
N |
C1 |
232.2 |
240.0 |
| C |
CA |
N |
HA |
119.9 |
120.0 |
| N |
CA |
C |
O |
72.9 |
20.0 |
| N |
CA |
C |
OXT |
254.1 |
200.1 |
| C1 |
CA |
N |
HA |
247.7 |
240.0 |
| N |
CA |
C1 |
C2 |
145.4 |
140.0 |
| N |
CA |
C1 |
C6 |
330.1 |
319.7 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H |
N |
CA |
C |
180.0 |
300.0 |
| H |
N |
CA |
C1 |
307.8 |
60.0 |
| H |
N |
CA |
HA |
60.1 |
180.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |
| H2 |
N |
CA |
C |
300.0 |
63.9 |
| H2 |
N |
CA |
C1 |
67.7 |
183.9 |
| H2 |
N |
CA |
HA |
180.1 |
303.9 |
| C |
CA |
N |
H |
180.0 |
300.0 |
| C |
CA |
N |
H2 |
300.0 |
63.9 |
| N |
CA |
C |
C1 |
130.6 |
120.0 |
| N |
CA |
C |
HA |
243.7 |
240.1 |
| C1 |
CA |
C |
HA |
113.2 |
120.1 |
| C |
CA |
C1 |
C2 |
271.2 |
260.0 |
| C |
CA |
C1 |
C6 |
95.9 |
79.7 |
| O |
C |
CA |
OXT |
178.8 |
180.0 |
| CA |
C |
OXT |
HXT |
178.8 |
180.0 |
| C1 |
CA |
N |
H |
307.8 |
60.0 |
| C1 |
CA |
N |
H2 |
67.7 |
183.9 |
| N |
CA |
C1 |
C |
234.2 |
240.0 |
| N |
CA |
C1 |
HA |
114.8 |
119.9 |
| C |
CA |
C1 |
HA |
240.7 |
239.9 |
| C1 |
CA |
C |
O |
302.3 |
260.0 |
| C1 |
CA |
C |
OXT |
123.5 |
80.0 |
| C2 |
C1 |
CA |
C6 |
175.4 |
180.3 |
| CA |
C1 |
C2 |
C3 |
188.7 |
180.0 |
| CA |
C1 |
C2 |
HC2 |
8.7 |
359.9 |
| CA |
C1 |
C6 |
C5 |
171.5 |
179.8 |
| CA |
C1 |
C6 |
H6 |
351.5 |
359.9 |
| HA |
CA |
N |
H |
60.1 |
180.0 |
| HA |
CA |
N |
H2 |
180.1 |
303.9 |
| N |
CA |
HA |
C |
117.6 |
120.0 |
| N |
CA |
HA |
C1 |
237.2 |
240.0 |
| C |
CA |
HA |
C1 |
119.6 |
120.1 |
| HA |
CA |
C |
O |
189.1 |
140.0 |
| HA |
CA |
C |
OXT |
10.3 |
320.0 |
| HA |
CA |
C1 |
C2 |
30.6 |
20.1 |
| HA |
CA |
C1 |
C6 |
215.2 |
199.8 |
| O |
C |
CA |
C1 |
302.3 |
260.0 |
| O |
C |
CA |
HA |
189.1 |
140.0 |
| CA |
C |
O |
OXT |
181.3 |
180.0 |
| O |
C |
OXT |
HXT |
0.0 |
0.0 |
| OXT |
C |
CA |
C1 |
123.5 |
80.0 |
| OXT |
C |
CA |
HA |
10.3 |
320.0 |
| CA |
C |
OXT |
O |
178.8 |
180.0 |
| C2 |
C1 |
CA |
HA |
30.6 |
20.1 |
| CA |
C1 |
C2 |
C6 |
184.5 |
179.7 |
| C2 |
C1 |
C6 |
C5 |
356.1 |
359.4 |
| C2 |
C1 |
C6 |
H6 |
176.1 |
179.6 |
| C3 |
C2 |
C1 |
HC2 |
180.0 |
180.1 |
| C1 |
C2 |
C3 |
C4 |
358.6 |
359.9 |
| C1 |
C2 |
C3 |
H3 |
178.6 |
179.9 |
| C6 |
C1 |
CA |
HA |
215.2 |
199.8 |
| CA |
C1 |
C6 |
C2 |
175.4 |
180.3 |
| C6 |
C1 |
C2 |
C3 |
4.3 |
0.3 |
| C6 |
C1 |
C2 |
HC2 |
184.3 |
180.3 |
| C4 |
C5 |
C6 |
C1 |
0.7 |
0.5 |
| C1 |
C6 |
C5 |
H5 |
180.7 |
180.3 |
| C5 |
C6 |
C1 |
H6 |
180.0 |
179.8 |
| C3 |
C2 |
C1 |
C6 |
4.3 |
0.3 |
| C1 |
C2 |
C3 |
HC2 |
180.0 |
179.9 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
| C2 |
C3 |
C4 |
O4 |
175.3 |
180.0 |
| C2 |
C3 |
C4 |
C5 |
358.1 |
0.0 |
| HC2 |
C2 |
C1 |
C6 |
184.3 |
180.3 |
| C1 |
C2 |
HC2 |
C3 |
180.0 |
180.1 |
| HC2 |
C2 |
C3 |
C4 |
178.6 |
180.0 |
| HC2 |
C2 |
C3 |
H3 |
358.6 |
0.0 |
| C4 |
C3 |
C2 |
HC2 |
178.6 |
180.0 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
| O4 |
C4 |
C3 |
C5 |
177.2 |
180.0 |
| C3 |
C4 |
O4 |
HO4 |
180.0 |
90.0 |
| C3 |
C4 |
C5 |
C6 |
2.2 |
359.7 |
| C3 |
C4 |
C5 |
H5 |
182.2 |
180.0 |
| H3 |
C3 |
C2 |
HC2 |
358.6 |
0.0 |
| C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
| H3 |
C3 |
C4 |
O4 |
355.3 |
360.0 |
| H3 |
C3 |
C4 |
C5 |
178.1 |
180.0 |
| O4 |
C4 |
C3 |
H3 |
355.3 |
360.0 |
| C3 |
C4 |
O4 |
C5 |
182.8 |
180.0 |
| O4 |
C4 |
C5 |
C6 |
185.0 |
179.8 |
| O4 |
C4 |
C5 |
H5 |
5.0 |
360.0 |
| C1 |
C6 |
C5 |
C4 |
0.7 |
0.5 |
| C5 |
C4 |
C3 |
H3 |
178.1 |
180.0 |
| C3 |
C4 |
C5 |
O4 |
177.2 |
180.0 |
| C5 |
C4 |
O4 |
HO4 |
357.2 |
269.9 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
179.8 |
| C4 |
C5 |
C6 |
H6 |
180.7 |
180.4 |
| HO4 |
O4 |
C4 |
C5 |
357.2 |
269.9 |
| C1 |
C6 |
C5 |
H6 |
180.0 |
180.2 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.2 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
179.8 |
| H5 |
C5 |
C6 |
H6 |
0.7 |
0.1 |
| C1 |
C6 |
H6 |
C5 |
180.0 |
179.8 |
| H6 |
C6 |
C5 |
H5 |
0.7 |
0.1 |