PDB Chemical Component GHG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GHG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.440 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
C |
1.489 |
1.507 |
| CA |
CB |
1.585 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| C |
O |
1.227 |
1.208 |
| CB |
CG |
1.546 |
1.530 |
| CB |
HB2 |
1.100 |
1.090 |
| CB |
HB3 |
1.100 |
1.090 |
| CG |
OG1 |
1.396 |
1.429 |
| CG |
CD |
1.545 |
1.507 |
| CG |
HG |
1.100 |
1.090 |
| OG1 |
HG1 |
0.950 |
0.967 |
| CD |
OE1 |
1.237 |
1.212 |
| CD |
NE2 |
1.343 |
1.349 |
| NE2 |
HE21 |
1.000 |
0.970 |
| NE2 |
HE22 |
1.000 |
0.970 |
| C |
OXT |
1.430 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for GHG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.1 |
| N |
CA |
C |
116.7 |
109.4 |
| N |
CA |
CB |
112.7 |
109.5 |
| N |
CA |
HA |
104.1 |
109.5 |
| H |
N |
H2 |
109.4 |
111.0 |
| C |
CA |
CB |
116.0 |
109.4 |
| C |
CA |
HA |
99.6 |
109.5 |
| CA |
C |
O |
122.8 |
120.0 |
| CA |
C |
OXT |
128.7 |
120.0 |
| CB |
CA |
HA |
105.1 |
109.5 |
| CA |
CB |
CG |
122.6 |
109.5 |
| CA |
CB |
HB2 |
105.3 |
109.5 |
| CA |
CB |
HB3 |
105.3 |
109.5 |
| O |
C |
OXT |
108.5 |
120.0 |
| CG |
CB |
HB2 |
105.3 |
109.4 |
| CG |
CB |
HB3 |
105.3 |
109.5 |
| CB |
CG |
OG1 |
94.2 |
109.4 |
| CB |
CG |
CD |
125.3 |
109.5 |
| CB |
CG |
HG |
107.8 |
109.5 |
| HB2 |
CB |
HB3 |
113.3 |
109.5 |
| OG1 |
CG |
CD |
101.3 |
109.4 |
| OG1 |
CG |
HG |
129.8 |
109.5 |
| CG |
OG1 |
HG1 |
109.5 |
114.0 |
| CD |
CG |
HG |
101.4 |
109.5 |
| CG |
CD |
OE1 |
121.2 |
120.0 |
| CG |
CD |
NE2 |
122.1 |
120.0 |
| OE1 |
CD |
NE2 |
116.5 |
120.0 |
| CD |
NE2 |
HE21 |
120.0 |
119.9 |
| CD |
NE2 |
HE22 |
120.0 |
120.0 |
| HE21 |
NE2 |
HE22 |
120.0 |
120.1 |
| C |
OXT |
HXT |
109.5 |
117.0 |
Torsion Angles for GHG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| C |
CA |
N |
CB |
138.0 |
119.9 |
| C |
CA |
N |
HA |
251.4 |
240.0 |
| N |
CA |
C |
O |
344.5 |
340.1 |
| N |
CA |
C |
OXT |
164.6 |
160.0 |
| CB |
CA |
N |
HA |
113.4 |
120.1 |
| N |
CA |
CB |
CG |
347.9 |
295.0 |
| N |
CA |
CB |
HB2 |
107.8 |
54.9 |
| N |
CA |
CB |
HB3 |
227.9 |
174.9 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H |
N |
CA |
C |
180.0 |
296.0 |
| H |
N |
CA |
CB |
42.0 |
176.0 |
| H |
N |
CA |
HA |
288.6 |
56.0 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| H2 |
N |
CA |
C |
300.0 |
60.0 |
| H2 |
N |
CA |
CB |
162.0 |
300.0 |
| H2 |
N |
CA |
HA |
48.6 |
180.0 |
| C |
CA |
N |
H |
180.0 |
296.0 |
| C |
CA |
N |
H2 |
300.0 |
60.0 |
| N |
CA |
C |
CB |
223.4 |
240.0 |
| N |
CA |
C |
HA |
111.2 |
120.0 |
| CB |
CA |
C |
HA |
247.8 |
240.0 |
| C |
CA |
CB |
CG |
209.6 |
175.1 |
| C |
CA |
CB |
HB2 |
329.5 |
295.0 |
| C |
CA |
CB |
HB3 |
89.6 |
55.0 |
| O |
C |
CA |
OXT |
180.0 |
180.1 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| CB |
CA |
N |
H |
42.0 |
176.0 |
| CB |
CA |
N |
H2 |
162.0 |
300.0 |
| N |
CA |
CB |
C |
138.3 |
119.9 |
| N |
CA |
CB |
HA |
247.2 |
239.9 |
| C |
CA |
CB |
HA |
108.9 |
120.0 |
| CB |
CA |
C |
O |
121.1 |
100.0 |
| CB |
CA |
C |
OXT |
301.2 |
279.9 |
| CG |
CB |
CA |
HB2 |
240.0 |
240.1 |
| CG |
CB |
CA |
HB3 |
120.0 |
120.0 |
| CA |
CB |
CG |
OG1 |
174.4 |
295.0 |
| CA |
CB |
CG |
CD |
67.3 |
175.0 |
| CA |
CB |
CG |
HG |
308.6 |
55.0 |
| HB2 |
CB |
CA |
HB3 |
240.0 |
240.0 |
| HA |
CA |
N |
H |
288.6 |
56.0 |
| HA |
CA |
N |
H2 |
48.6 |
180.0 |
| N |
CA |
HA |
C |
239.2 |
240.0 |
| N |
CA |
HA |
CB |
118.7 |
120.1 |
| C |
CA |
HA |
CB |
239.6 |
240.0 |
| HA |
CA |
C |
O |
233.3 |
220.0 |
| HA |
CA |
C |
OXT |
53.3 |
40.0 |
| HA |
CA |
CB |
CG |
100.6 |
55.0 |
| HA |
CA |
CB |
HB2 |
220.6 |
175.0 |
| HA |
CA |
CB |
HB3 |
340.6 |
295.0 |
| O |
C |
CA |
CB |
121.1 |
100.0 |
| O |
C |
CA |
HA |
233.3 |
220.0 |
| CA |
C |
O |
OXT |
180.0 |
179.9 |
| O |
C |
OXT |
HXT |
0.0 |
359.9 |
| CG |
CB |
CA |
HA |
100.6 |
55.0 |
| CA |
CB |
CG |
HB2 |
120.0 |
120.0 |
| CA |
CB |
CG |
HB3 |
240.0 |
240.0 |
| HB2 |
CB |
CG |
HB3 |
120.0 |
120.0 |
| OG1 |
CG |
CB |
CD |
107.1 |
120.0 |
| OG1 |
CG |
CB |
HG |
225.8 |
240.0 |
| CB |
CG |
OG1 |
HG1 |
180.0 |
300.0 |
| CD |
CG |
CB |
HG |
118.7 |
120.0 |
| CB |
CG |
CD |
OE1 |
331.5 |
114.9 |
| CB |
CG |
CD |
NE2 |
157.2 |
295.0 |
| HB2 |
CB |
CA |
HA |
220.6 |
175.0 |
| CA |
CB |
HB2 |
CG |
229.1 |
240.1 |
| CA |
CB |
HB2 |
HB3 |
114.6 |
120.1 |
| CG |
CB |
HB2 |
HB3 |
245.4 |
240.0 |
| HB2 |
CB |
CG |
OG1 |
54.4 |
175.0 |
| HB2 |
CB |
CG |
CD |
307.4 |
55.1 |
| HB2 |
CB |
CG |
HG |
188.6 |
295.0 |
| HB3 |
CB |
CA |
HA |
340.6 |
295.0 |
| CA |
CB |
HB3 |
CG |
130.9 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
245.4 |
240.0 |
| CG |
CB |
HB3 |
HB2 |
114.6 |
120.0 |
| HB3 |
CB |
CG |
OG1 |
294.4 |
55.0 |
| HB3 |
CB |
CG |
CD |
187.3 |
295.1 |
| HB3 |
CB |
CG |
HG |
68.6 |
175.0 |
| OG1 |
CG |
CB |
HB2 |
54.4 |
175.0 |
| OG1 |
CG |
CB |
HB3 |
294.4 |
55.0 |
| CB |
CG |
OG1 |
CD |
232.7 |
240.0 |
| CB |
CG |
OG1 |
HG |
117.3 |
120.0 |
| CD |
CG |
OG1 |
HG |
244.7 |
240.0 |
| OG1 |
CG |
CD |
OE1 |
228.0 |
355.0 |
| OG1 |
CG |
CD |
NE2 |
53.7 |
175.0 |
| CD |
CG |
CB |
HB2 |
307.4 |
55.1 |
| CD |
CG |
CB |
HB3 |
187.3 |
295.1 |
| CB |
CG |
CD |
OG1 |
103.5 |
120.0 |
| CB |
CG |
CD |
HG |
238.4 |
239.9 |
| OG1 |
CG |
CD |
HG |
134.9 |
120.0 |
| CD |
CG |
OG1 |
HG1 |
307.3 |
60.0 |
| OE1 |
CD |
CG |
NE2 |
174.3 |
180.0 |
| CG |
CD |
NE2 |
HE21 |
174.6 |
360.0 |
| CG |
CD |
NE2 |
HE22 |
354.6 |
180.0 |
| HG |
CG |
CB |
HB2 |
188.6 |
295.0 |
| HG |
CG |
CB |
HB3 |
68.6 |
175.0 |
| CB |
CG |
HG |
OG1 |
248.5 |
240.0 |
| CB |
CG |
HG |
CD |
133.1 |
120.1 |
| OG1 |
CG |
HG |
CD |
244.7 |
240.0 |
| HG |
CG |
OG1 |
HG1 |
62.7 |
179.9 |
| HG |
CG |
CD |
OE1 |
93.1 |
235.0 |
| HG |
CG |
CD |
NE2 |
278.8 |
55.1 |
| HG1 |
OG1 |
CG |
CD |
307.3 |
60.0 |
| HG1 |
OG1 |
CG |
HG |
62.7 |
179.9 |
| OE1 |
CD |
CG |
HG |
93.1 |
235.0 |
| CG |
CD |
OE1 |
NE2 |
185.4 |
180.0 |
| OE1 |
CD |
NE2 |
HE21 |
0.0 |
180.0 |
| OE1 |
CD |
NE2 |
HE22 |
180.0 |
0.0 |
| NE2 |
CD |
CG |
HG |
278.8 |
55.1 |
| CG |
CD |
NE2 |
OE1 |
174.6 |
180.0 |
| HE21 |
NE2 |
CD |
HE22 |
180.0 |
180.0 |
| CD |
NE2 |
HE21 |
HE22 |
180.0 |
180.0 |
| CD |
NE2 |
HE22 |
HE21 |
180.0 |
180.0 |
| OXT |
C |
CA |
CB |
301.2 |
279.9 |
| OXT |
C |
CA |
HA |
53.3 |
40.0 |
| CA |
C |
OXT |
O |
180.0 |
180.1 |