PDB Chemical Component GH3

Ideal Model

Chemical Description

Name 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE
Formula C10 H16 N5 O13 P3
Formal charge 0
Molecular weight 507.181 g/mol
Component type RNA LINKING
Nonstandard Parent Id G

Chemical features

Atom count 47
Chiral atom count 5
Chiral atoms PB PA C4' C2' C1'
Bond count 49
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 3'-deoxyguanosine 5'-(tetrahydrogen triphosphate)
Systematic name (OpenEye OEToolkits) [[(2S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-4-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)C[C@H]3O
SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)C[CH]3O
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@@H](C[C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)N=C(NC2=O)N
InChI descriptor InChI=1S/C10H16N5O13P3/c11-10-13-7-6(8(17)14-10)12-3-15(7)9-5(16)1-4(26-9)2-25-30(21,22)28-31(23,24)27-29(18,19)20/h3-5,9,16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,9+/m0/s1
InChIKey descriptor QGYIFQKZZSSUCR-OBXARNEKSA-N

Status Information

Last modified 2011-06-04
Created 2002-10-24
Release status REL
Model PDB code 1N1H
Processing site RCSB