PDB Chemical Component GGY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GGY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 C02 1.543 1.529
C02 C03 1.534 1.507
C02 O09 1.444 1.430
C03 C04 1.340 1.310
C04 C05 1.532 1.507
C05 F06 1.372 1.399
C05 F07 1.349 1.399
C05 F08 1.364 1.399
O09 C10 1.374 1.356
C10 C11 1.409 1.385
C10 C31 1.432 1.403
C11 C12 1.405 1.393
C12 C13 1.483 1.481
C12 C29 1.440 1.397
C13 C14 1.416 1.393
C13 C27 1.407 1.404
C14 C15 1.403 1.399
C15 C16 1.484 1.479
C15 C25 1.386 1.395
C16 C17 1.378 1.347
C16 S24 1.755 1.759
C17 C18 1.473 1.380
C18 C19 1.551 1.507
C18 C23 1.349 1.336
C19 N20 1.544 1.468
N20 C21 1.541 1.469
N20 C22 1.529 1.469
C23 S24 1.729 1.758
C25 N26 1.327 1.318
N26 C27 1.362 1.324
C27 N28 1.385 1.386
C29 C30 1.389 1.364
C30 C31 1.406 1.398
C31 C32 1.497 1.474
C32 N33 1.392 1.347
C32 O34 1.208 1.217
C01 H011 1.100 1.090
C01 H012 1.100 1.091
C01 H013 1.100 1.090
C02 H02 1.100 1.090
C03 H03 1.080 1.079
C04 H04 1.079 1.081
C11 H11 1.080 1.080
C29 H29 1.080 1.080
C14 H14 1.080 1.079
C25 H25 1.080 1.080
C17 H17 1.080 1.080
C19 H191 1.100 1.091
C19 H192 1.100 1.090
C23 H23 1.080 1.080
C21 H211 1.099 1.090
C21 H212 1.100 1.090
C21 H213 1.100 1.090
C22 H221 1.100 1.090
C22 H222 1.100 1.091
C22 H223 1.100 1.091
N28 H281 1.000 0.970
N28 H282 1.000 0.970
C30 H30 1.080 1.080
N33 H331 1.000 0.970
N33 H332 1.000 0.970

Bond Angles for GGY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 C02 C03 107.8 109.5
C01 C02 O09 111.6 109.5
C02 C01 H011 109.5 109.5
C02 C01 H012 109.5 109.5
C02 C01 H013 109.5 109.4
C01 C02 H02 107.7 109.5
C03 C02 O09 112.8 109.4
C02 C03 C04 124.8 119.9
C03 C02 H02 107.8 109.5
C02 C03 H03 117.6 120.0
C02 O09 C10 120.6 117.0
O09 C02 H02 108.9 109.4
C03 C04 C05 125.3 120.1
C04 C03 H03 117.6 120.0
C03 C04 H04 117.4 120.0
C04 C05 F06 114.6 109.4
C04 C05 F07 113.5 109.5
C04 C05 F08 113.7 109.5
C05 C04 H04 117.4 120.0
F06 C05 F07 105.2 109.5
F06 C05 F08 104.8 109.4
F07 C05 F08 103.9 109.5
O09 C10 C11 123.1 120.2
O09 C10 C31 118.7 120.2
C11 C10 C31 118.2 119.7
C10 C11 C12 124.0 119.9
C10 C11 H11 118.0 120.1
C10 C31 C30 118.6 119.9
C10 C31 C32 119.3 120.0
C11 C12 C13 122.7 119.9
C11 C12 C29 116.3 120.1
C12 C11 H11 118.0 120.1
C13 C12 C29 120.9 120.0
C12 C13 C14 122.8 120.5
C12 C13 C27 121.7 120.5
C12 C29 C30 120.7 120.3
C12 C29 H29 119.6 119.8
C14 C13 C27 115.4 119.0
C13 C14 C15 125.9 118.2
C13 C14 H14 117.1 120.9
C13 C27 N26 120.1 120.7
C13 C27 N28 123.2 119.7
C14 C15 C16 128.8 120.4
C14 C15 C25 111.6 119.2
C15 C14 H14 117.1 120.9
C16 C15 C25 119.6 120.4
C15 C16 C17 131.4 125.3
C15 C16 S24 122.5 125.3
C15 C25 N26 126.4 120.9
C15 C25 H25 116.8 119.5
C17 C16 S24 106.1 109.5
C16 C17 C18 117.3 114.7
C16 C17 H17 121.4 122.7
C16 S24 C23 94.5 91.0
C17 C18 C19 124.3 122.5
C17 C18 C23 109.6 115.0
C18 C17 H17 121.3 122.6
C19 C18 C23 126.1 122.4
C18 C19 N20 118.3 109.5
C18 C19 H191 107.2 109.5
C18 C19 H192 107.2 109.4
C18 C23 S24 112.4 109.8
C18 C23 H23 123.8 125.1
C19 N20 C21 111.5 111.0
C19 N20 C22 110.2 111.0
N20 C19 H191 107.2 109.5
N20 C19 H192 107.2 109.5
C21 N20 C22 107.9 111.0
N20 C21 H211 109.5 109.5
N20 C21 H212 109.5 109.5
N20 C21 H213 109.4 109.5
N20 C22 H221 109.5 109.5
N20 C22 H222 109.5 109.5
N20 C22 H223 109.5 109.5
S24 C23 H23 123.8 125.1
C25 N26 C27 120.6 121.9
N26 C25 H25 116.8 119.6
N26 C27 N28 116.7 119.6
C27 N28 H281 109.5 120.0
C27 N28 H282 109.4 120.1
C29 C30 C31 122.2 120.2
C30 C29 H29 119.7 119.9
C29 C30 H30 118.9 119.9
C30 C31 C32 122.1 120.1
C31 C30 H30 118.9 119.9
C31 C32 N33 119.5 120.0
C31 C32 O34 123.9 120.0
N33 C32 O34 116.6 120.0
C32 N33 H331 120.0 120.0
C32 N33 H332 120.0 120.0
H011 C01 H012 109.5 109.5
H011 C01 H013 109.5 109.5
H012 C01 H013 109.4 109.5
H191 C19 H192 109.5 109.5
H211 C21 H212 109.5 109.5
H211 C21 H213 109.5 109.4
H212 C21 H213 109.5 109.5
H221 C22 H222 109.5 109.5
H221 C22 H223 109.4 109.5
H222 C22 H223 109.5 109.4
H281 N28 H282 109.5 120.0
H331 N33 H332 120.0 120.0

Torsion Angles for GGY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C03 C02 C01 O09 124.4 120.0
C01 C02 C03 C04 104.7 115.9
C03 C02 C01 H02 243.9 239.9
C01 C02 C03 H03 284.7 295.9
C01 C02 O09 C10 200.3 275.2
O09 C02 C01 H02 119.5 119.9
H011 C01 C02 H012 240.0 240.0
H011 C01 C02 H013 120.0 120.0
H012 C01 C02 H013 240.0 240.0
C01 C02 C03 O09 236.4 240.0
C03 C02 C01 H011 180.0 60.0
C03 C02 C01 H012 300.0 180.0
C03 C02 C01 H013 60.0 299.9
C01 C02 C03 H02 116.0 120.1
C03 C02 O09 C10 78.7 155.2
O09 C02 C03 H02 239.7 240.1
C02 C03 C04 C05 332.8 5.9
C04 C03 C02 H03 180.0 180.0
C02 C03 C04 H04 152.8 185.9
C01 C02 O09 C03 121.6 120.0
O09 C02 C01 H011 55.6 300.0
O09 C02 C01 H012 175.6 60.0
O09 C02 C01 H013 295.6 180.0
C01 C02 O09 H02 241.2 240.0
O09 C02 C03 C04 228.3 235.9
C03 C02 O09 H02 119.7 120.0
O09 C02 C03 H03 48.3 55.9
C02 O09 C10 C11 28.6 5.6
C02 O09 C10 C31 208.4 185.3
C04 C03 C02 O09 228.3 235.9
C04 C03 C02 H02 348.7 355.8
C02 C03 C04 H03 180.0 180.0
C03 C04 C05 F06 200.2 55.7
C03 C04 C05 F07 79.2 175.7
C03 C04 C05 F08 320.7 295.8
C05 C04 C03 H04 180.0 180.0
C05 C04 C03 H03 152.8 185.9
C03 C04 C05 H04 180.0 180.0
F06 C05 C04 F07 120.9 240.0
F06 C05 C04 F08 239.4 119.9
F07 C05 C04 F08 118.5 240.0
C04 C05 F06 F07 234.6 120.0
C04 C05 F06 F08 125.4 240.1
F06 C05 C04 H04 20.2 235.7
F07 C05 F06 F08 250.8 120.0
C04 C05 F07 F06 126.1 240.0
C04 C05 F07 F08 236.0 120.0
F07 C05 C04 H04 259.2 355.7
F06 C05 F07 F08 109.9 240.0
C04 C05 F08 F06 234.0 119.9
C04 C05 F08 F07 123.9 239.9
F08 C05 C04 H04 140.7 115.8
F06 C05 F08 F07 249.8 120.0
C10 O09 C02 H02 319.0 35.2
C11 C10 O09 C31 180.2 180.2
O09 C10 C11 C12 179.4 180.0
O09 C10 C11 H11 359.4 0.0
O09 C10 C31 C30 180.5 179.7
O09 C10 C31 C32 0.1 360.0
O09 C10 C11 C31 179.8 179.8
C11 C10 C31 C30 0.3 359.5
C11 C10 C31 C32 179.9 179.7
C10 C11 C12 C13 178.4 180.1
C10 C11 C12 C29 1.2 0.0
C12 C11 C10 H11 180.0 180.0
O09 C10 C31 C11 180.2 180.2
C31 C10 C11 C12 359.6 0.2
C31 C10 C11 H11 179.6 180.2
C29 C30 C31 C10 358.8 0.6
C30 C31 C10 C32 180.4 179.7
C10 C31 C30 H30 178.8 180.3
C10 C31 C32 N33 26.8 180.0
C10 C31 C32 O34 206.5 0.0
C12 C11 C10 C31 359.6 0.2
C10 C11 C12 H11 180.0 180.0
C13 C12 C11 C29 177.2 180.0
C11 C12 C13 C14 309.3 130.0
C11 C12 C13 C27 132.8 309.7
C11 C12 C29 C30 357.9 0.0
C11 C12 C29 H29 177.9 179.9
C11 C12 C13 C29 182.9 180.0
C13 C12 C11 H11 358.4 0.1
C13 C12 C29 C30 180.7 180.0
C13 C12 C29 H29 0.6 359.9
C14 C13 C12 C27 176.6 180.3
C12 C13 C14 C15 182.1 180.0
C12 C13 C14 H14 2.1 360.0
C12 C13 C27 N26 178.2 179.7
C12 C13 C27 N28 357.0 0.0
C11 C12 C29 C13 177.3 180.0
C29 C12 C11 H11 181.2 180.0
C29 C12 C13 C14 126.4 310.1
C29 C12 C13 C27 309.9 129.7
C12 C29 C30 C31 2.2 359.7
C30 C29 C12 H29 180.0 180.1
C12 C29 C30 H30 182.2 180.0
C14 C13 C12 C29 126.4 310.1
C12 C13 C14 C27 183.2 179.7
C14 C13 C27 N26 1.4 359.4
C14 C13 C27 N28 180.2 179.7
C13 C14 C15 C16 179.5 180.0
C13 C14 C15 C25 0.0 360.0
C15 C14 C13 H14 180.0 180.0
C27 C13 C12 C29 309.9 129.7
C12 C13 C27 C14 176.8 180.3
C27 C13 C14 C15 358.9 0.3
C27 C13 C14 H14 178.9 180.3
C25 N26 C27 C13 359.3 0.6
N26 C27 C13 N28 181.3 179.7
C13 C27 N28 H281 181.3 360.0
C13 C27 N28 H282 301.2 180.0
C15 C14 C13 C27 358.9 0.3
C13 C14 C15 H14 180.0 180.0
C16 C15 C14 C25 179.5 180.0
C14 C15 C16 C17 182.5 180.0
C14 C15 C16 S24 0.6 359.7
C14 C15 C25 N26 0.9 360.0
C14 C15 C25 H25 180.8 180.0
C14 C15 C16 C25 180.5 180.0
C16 C15 C14 H14 359.5 0.0
C16 C15 C25 N26 181.3 179.9
C16 C15 C25 H25 1.3 360.0
C17 C16 C15 S24 181.9 180.3
C15 C16 C17 C18 179.1 179.9
C15 C16 C17 H17 359.1 359.9
C15 C16 S24 C23 180.6 180.0
C14 C15 C25 C16 179.6 180.0
C25 C15 C14 H14 180.0 180.0
C25 C15 C16 C17 2.0 0.0
C25 C15 C16 S24 180.1 179.7
C15 C25 N26 C27 359.5 359.7
N26 C25 C15 H25 180.0 180.0
C17 C16 C15 C25 2.0 0.0
C15 C16 C17 S24 178.3 179.7
C17 C16 S24 C23 359.1 359.7
C16 C17 C18 C19 178.9 180.0
C16 C17 C18 C23 359.8 0.0
C18 C17 C16 H17 180.0 180.0
S24 C16 C15 C25 180.1 179.7
C15 C16 S24 C17 181.5 180.3
S24 C16 C17 C18 0.8 0.2
S24 C16 C17 H17 180.8 180.2
C18 C23 S24 C16 0.9 0.3
C16 S24 C23 H23 180.9 180.2
C18 C17 C16 S24 0.8 0.2
C16 C17 C18 H17 180.0 180.0
C19 C18 C17 C23 179.1 180.0
C17 C18 C19 N20 332.7 90.0
C17 C18 C19 H191 93.9 210.1
C17 C18 C19 H192 211.4 330.0
C17 C18 C23 S24 359.5 359.8
C17 C18 C23 H23 179.4 179.9
C17 C18 C19 C23 181.0 180.0
C19 C18 C17 H17 358.9 0.0
C19 C18 C23 S24 180.4 179.8
C19 C18 C23 H23 0.3 359.9
C18 C19 N20 C21 157.4 66.1
C18 C19 N20 C22 277.2 190.0
N20 C19 C18 H191 238.7 240.0
N20 C19 C18 H192 121.3 120.0
H191 C19 C18 H192 242.5 240.0
C16 S24 C23 C18 0.9 0.3
C17 C18 C23 C19 179.1 180.0
C23 C18 C17 H17 179.8 180.0
C23 C18 C19 N20 151.6 270.0
C23 C18 C19 H191 272.9 30.1
C23 C18 C19 H192 30.4 150.0
S24 C23 C18 H23 180.0 179.9
N20 C19 C18 C23 151.6 270.0
C18 C19 N20 H191 121.3 120.0
C18 C19 N20 H192 238.7 240.0
C21 N20 C19 C22 240.2 236.0
C19 N20 C21 H211 180.0 60.0
C19 N20 C21 H212 300.0 180.0
C19 N20 C21 H213 60.0 300.0
C19 N20 C22 H221 180.0 60.0
C19 N20 C22 H222 300.0 180.0
C19 N20 C22 H223 60.0 299.9
H191 C19 N20 H192 117.5 120.0
C19 N20 C21 C22 121.1 124.0
C21 N20 C19 H191 36.1 306.0
C21 N20 C19 H192 278.7 186.0
C21 N20 C22 H221 301.9 184.0
C21 N20 C22 H222 62.0 304.0
C21 N20 C22 H223 182.0 64.0
H211 C21 N20 H212 240.0 240.0
H211 C21 N20 H213 120.0 119.9
H212 C21 N20 H213 240.0 240.0
C19 N20 C22 C21 238.1 236.0
C22 N20 C19 H191 155.9 70.0
C22 N20 C19 H192 38.4 310.0
C22 N20 C21 H211 58.9 296.0
C22 N20 C21 H212 178.9 56.0
C22 N20 C21 H213 298.9 176.0
H221 C22 N20 H222 240.0 240.0
H221 C22 N20 H223 120.0 120.0
H222 C22 N20 H223 240.0 240.0
C18 C23 S24 H23 180.0 180.1
C13 C27 N26 C25 359.3 0.6
C15 C25 N26 H25 180.0 180.0
C25 N26 C27 N28 180.5 180.3
C13 C27 N26 N28 178.8 180.3
C27 N26 C25 H25 179.5 179.7
N26 C27 N28 H281 0.0 180.3
N26 C27 N28 H282 120.0 0.3
C13 C27 N28 N26 181.2 179.7
H281 N28 C27 H282 240.0 180.0
C10 C31 C30 C29 358.8 0.6
C12 C29 C30 H29 180.0 179.9
C29 C30 C31 C32 179.2 180.3
C31 C30 C29 H30 180.0 179.7
C10 C31 C30 C32 179.5 180.3
C31 C30 C29 H29 182.2 179.8
C29 C30 C31 H30 180.0 180.3
C30 C31 C32 N33 206.4 0.3
C30 C31 C32 O34 26.1 180.3
C10 C31 C32 C30 180.5 179.7
C32 C31 C30 H30 359.2 360.0
N33 C32 C31 O34 180.3 180.0
C31 C32 N33 H331 179.7 0.1
C31 C32 N33 H332 359.7 180.0
C31 C32 N33 O34 179.7 180.0
H331 N33 C32 H332 180.0 180.1
C31 C32 O34 N33 180.3 180.0
O34 C32 N33 H331 360.0 180.0
O34 C32 N33 H332 180.0 359.9
H011 C01 C02 C03 180.0 60.0
H011 C01 C02 O09 55.6 300.0
C02 C01 H011 H012 120.0 120.0
C02 C01 H011 H013 240.0 240.0
H011 C01 C02 H02 296.1 180.1
H012 C01 H011 H013 120.0 120.0
H012 C01 C02 C03 300.0 180.0
H012 C01 C02 O09 175.6 60.0
C02 C01 H012 H011 240.0 240.0
C02 C01 H012 H013 120.0 120.0
H012 C01 C02 H02 56.1 300.1
H011 C01 H012 H013 240.0 240.0
H013 C01 C02 C03 60.0 299.9
H013 C01 C02 O09 295.6 180.0
C02 C01 H013 H011 120.0 120.0
C02 C01 H013 H012 240.0 240.0
H013 C01 C02 H02 176.1 60.0
H011 C01 H013 H012 120.0 120.0
C01 C02 H02 C03 243.9 239.9
C01 C02 H02 O09 121.1 120.0
H02 C02 C01 H011 296.1 180.1
H02 C02 C01 H012 56.1 300.1
H02 C02 C01 H013 176.1 60.0
C03 C02 H02 O09 237.3 240.1
H02 C02 C03 C04 348.7 355.8
H02 C02 C03 H03 168.7 175.8
H02 C02 O09 C10 319.0 35.2
H03 C03 C02 O09 48.3 55.9
C02 C03 H03 C04 180.0 180.0
H03 C03 C02 H02 168.7 175.8
H03 C03 C04 C05 152.8 185.9
H03 C03 C04 H04 332.8 5.9
C03 C04 H04 C05 180.0 180.0
H04 C04 C03 H03 332.8 5.9
H04 C04 C05 F06 20.2 235.7
H04 C04 C05 F07 259.2 355.7
H04 C04 C05 F08 140.7 115.8
H11 C11 C10 C31 179.6 180.2
C10 C11 H11 C12 180.0 180.0
H11 C11 C12 C13 358.4 0.1
H11 C11 C12 C29 181.2 180.0
C12 C29 H29 C30 180.0 180.1
H29 C29 C30 C31 182.2 179.8
H29 C29 C30 H30 2.2 0.1
H14 C14 C13 C27 178.9 180.3
C13 C14 H14 C15 180.0 180.0
H14 C14 C15 C16 359.5 0.0
H14 C14 C15 C25 180.0 180.0
C15 C25 H25 N26 180.0 180.0
H25 C25 N26 C27 179.5 179.7
H17 C17 C16 S24 180.8 180.2
C16 C17 H17 C18 180.0 180.0
H17 C17 C18 C19 358.9 0.0
H17 C17 C18 C23 179.8 180.0
H191 C19 C18 C23 272.9 30.1
C18 C19 H191 N20 232.0 240.0
C18 C19 H191 H192 116.0 119.9
H191 C19 N20 C21 36.1 306.0
H191 C19 N20 C22 155.9 70.0
N20 C19 H191 H192 244.0 240.0
H192 C19 C18 C23 30.4 150.0
C18 C19 H192 N20 128.0 120.0
C18 C19 H192 H191 244.0 240.0
H192 C19 N20 C21 278.7 186.0
H192 C19 N20 C22 38.4 310.0
N20 C19 H192 H191 116.0 120.0
C18 C23 H23 S24 180.0 179.8
H211 C21 N20 C22 58.9 296.0
N20 C21 H211 H212 120.0 120.0
N20 C21 H211 H213 240.0 240.0
H212 C21 H211 H213 120.0 120.0
H212 C21 N20 C22 178.9 56.0
N20 C21 H212 H211 240.0 240.0
N20 C21 H212 H213 120.0 120.0
H211 C21 H212 H213 240.0 240.1
H213 C21 N20 C22 298.9 176.0
N20 C21 H213 H211 120.0 120.0
N20 C21 H213 H212 240.0 239.9
H211 C21 H213 H212 120.0 120.0
N20 C22 H221 H222 120.0 120.0
N20 C22 H221 H223 240.0 240.0
H222 C22 H221 H223 120.0 119.9
N20 C22 H222 H221 239.9 239.9
N20 C22 H222 H223 120.0 120.0
H221 C22 H222 H223 240.0 240.0
N20 C22 H223 H221 120.0 120.1
N20 C22 H223 H222 240.0 240.0
H221 C22 H223 H222 120.0 120.0
C27 N28 H281 H282 120.0 180.0
C27 N28 H282 H281 240.0 180.0
C29 C30 H30 C31 180.0 179.7
H30 C30 C29 H29 2.2 0.1
H30 C30 C31 C32 359.2 360.0
H331 N33 C32 O34 360.0 180.0
C32 N33 H331 H332 180.0 179.9
H332 N33 C32 O34 180.0 359.9
C32 N33 H332 H331 180.0 180.1