PDB Chemical Component GG5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GG5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C6 1.445 1.385
C1 N2 1.398 1.351
C1 H1 1.080 1.085
N2 C3 1.384 1.352
C3 C4 1.518 1.386
C3 H3 1.080 1.085
C4 C5 1.474 1.393
C4 H4 1.080 1.085
C5 C6 1.474 1.392
C5 C7 1.539 1.431
C6 H6 1.080 1.086
C7 C12 1.461 1.411
C7 C8 1.420 1.374
C8 N9 1.341 1.364
C8 H8 1.080 1.081
N9 N11 1.335 1.344
N9 HN9 1.000 1.012
N11 C12 1.347 1.338
C12 C13 1.677 1.437
C13 C14 1.451 1.395
C13 C18 1.484 1.395
C14 C15 1.452 1.395
C14 H14 1.080 1.087
C15 C16 1.462 1.396
C15 H15 1.080 1.086
C16 F19 1.303 1.339
C16 C17 1.441 1.395
C17 C18 1.437 1.395
C17 H17 1.080 1.086
C18 H18 1.080 1.088

Bond Angles for GG5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N2 C1 C6 123.2 124.1
C6 C1 H1 118.4 120.8
C1 C6 C5 120.2 118.1
C1 C6 H6 119.9 120.2
N2 C1 H1 118.4 115.2
C1 N2 C3 119.1 116.4
N2 C3 C4 122.4 124.0
N2 C3 H3 118.8 115.2
C4 C3 H3 118.8 120.8
C3 C4 C5 118.0 118.0
C3 C4 H4 121.0 120.2
C5 C4 H4 121.0 121.7
C4 C5 C6 117.2 119.4
C4 C5 C7 120.3 120.3
C6 C5 C7 122.5 120.3
C5 C6 H6 119.9 121.7
C5 C7 C12 134.4 131.8
C5 C7 C8 122.4 123.5
C8 C7 C12 103.2 104.6
C7 C12 N11 108.8 112.4
C7 C12 C13 128.4 127.4
C7 C8 N9 107.7 105.9
C7 C8 H8 126.2 132.8
N9 C8 H8 126.1 121.4
C8 N9 N11 112.4 113.8
C8 N9 HN9 123.8 127.9
N11 N9 HN9 123.8 118.3
N9 N11 C12 107.8 103.3
N11 C12 C13 122.8 120.3
C12 C13 C14 129.7 120.0
C12 C13 C18 112.0 120.0
C14 C13 C18 118.3 120.0
C13 C14 C15 120.6 120.0
C13 C14 H14 119.7 120.9
C13 C18 C17 121.5 120.0
C13 C18 H18 119.2 120.9
C15 C14 H14 119.7 119.1
C14 C15 C16 119.5 120.0
C14 C15 H15 120.2 120.0
C16 C15 H15 120.3 120.0
C15 C16 F19 119.0 120.0
C15 C16 C17 121.1 120.0
C17 C16 F19 119.8 120.0
C16 C17 C18 119.0 120.0
C16 C17 H17 120.5 120.0
C18 C17 H17 120.5 120.0
C17 C18 H18 119.3 119.1

Torsion Angles for GG5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N2 C1 C6 H1 180.0 180.2
C6 C1 N2 C3 0.0 359.9
C4 C5 C6 C1 0.0 359.9
C1 C6 C5 C7 180.0 179.9
C5 C6 C1 H6 180.0 180.1
C6 C1 N2 H1 180.0 179.8
N2 C1 C6 C5 360.0 0.1
N2 C1 C6 H6 180.0 180.0
C1 N2 C3 C4 0.0 0.1
C1 N2 C3 H3 180.0 180.1
N2 C1 H1 C6 180.0 179.8
H1 C1 C6 C5 180.0 179.9
H1 C1 C6 H6 359.9 359.8
H1 C1 N2 C3 180.0 180.1
C3 N2 C1 C6 0.0 359.9
C3 N2 C1 H1 180.0 180.1
C4 C3 N2 H3 180.0 180.0
N2 C3 C4 C5 360.0 360.0
N2 C3 C4 H4 180.0 180.0
N2 C3 C4 H3 180.0 180.0
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 0.0 0.0
C3 C4 C5 C7 180.0 180.0
N2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 180.0 180.0
H3 C3 C4 H4 360.0 360.0
C1 C6 C5 C4 0.0 359.9
C5 C4 C3 H3 180.0 180.0
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 C7 180.0 180.0
C4 C5 C6 H6 180.0 180.0
C4 C5 C7 C12 143.4 270.0
C4 C5 C7 C8 323.1 90.0
H4 C4 C3 H3 360.0 360.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 180.0 180.0
H4 C4 C5 C7 360.0 0.0
C5 C6 C1 H1 180.0 179.9
C1 C6 C5 H6 180.0 179.9
C6 C5 C4 H4 180.0 180.0
C4 C5 C6 C7 180.0 180.0
C6 C5 C7 C12 323.4 90.0
C6 C5 C7 C8 143.1 270.0
C7 C5 C4 H4 360.0 0.0
C4 C5 C7 C6 180.0 180.0
C7 C5 C6 H6 0.1 0.0
C8 C7 C5 C12 179.7 179.9
C5 C7 C12 N11 179.7 179.9
C5 C7 C12 C13 359.8 359.9
C5 C7 C8 N9 180.2 180.1
C5 C7 C8 H8 0.2 0.0
H6 C6 C1 H1 359.9 359.8
C1 C6 H6 C5 180.0 180.1
H6 C6 C5 C7 0.1 0.0
C5 C7 C12 C8 179.7 179.9
C12 C7 C8 N9 0.0 0.0
C12 C7 C8 H8 180.0 179.9
N9 N11 C12 C7 0.1 0.0
N11 C12 C7 C13 179.8 180.0
C7 C12 C13 C14 126.1 90.0
C7 C12 C13 C18 305.9 270.0
C5 C7 C8 C12 180.2 180.1
C8 C7 C12 N11 359.9 360.0
C8 C7 C12 C13 180.1 180.0
N9 C8 C7 H8 180.0 180.1
C7 C8 N9 N11 0.0 360.0
C7 C8 N9 HN9 180.0 180.0
N9 C8 C7 C12 0.0 0.0
C7 C8 N9 H8 180.0 179.9
N11 N9 C8 HN9 180.0 180.0
C8 N9 N11 C12 359.9 0.0
H8 C8 C7 C12 180.0 179.9
C7 C8 H8 N9 180.0 180.1
H8 C8 N9 N11 180.1 180.0
H8 C8 N9 HN9 0.1 0.0
C7 C12 N11 N9 0.1 0.0
N11 N9 C8 H8 180.1 180.0
C8 N9 N11 HN9 180.0 180.0
N9 N11 C12 C13 179.9 180.0
HN9 N9 C8 H8 0.1 0.0
C8 N9 HN9 N11 180.0 180.0
HN9 N9 N11 C12 179.9 180.0
C7 C12 N11 C13 180.2 180.0
C12 N11 N9 HN9 179.9 180.0
N11 C12 C13 C14 306.3 270.0
N11 C12 C13 C18 126.1 90.0
C7 C12 C13 N11 179.8 180.0
C14 C13 C12 C18 180.2 180.1
C12 C13 C14 C15 179.7 180.0
C12 C13 C14 H14 359.7 0.0
C12 C13 C18 C17 180.3 180.0
C12 C13 C18 H18 0.3 0.1
C12 C13 C14 C18 179.8 179.9
C14 C13 C18 C17 0.1 359.9
C14 C13 C18 H18 180.1 180.0
C15 C14 C13 H14 180.0 179.9
C13 C14 C15 C16 360.0 0.0
C13 C14 C15 H15 180.0 179.9
C12 C13 C18 C14 180.2 180.1
C18 C13 C14 C15 359.9 0.0
C18 C13 C14 H14 179.9 180.1
C16 C17 C18 C13 0.0 0.1
C13 C18 C17 H17 180.0 180.0
C17 C18 C13 H18 180.0 179.9
C15 C14 C13 C18 359.9 0.0
C13 C14 C15 H14 180.0 180.1
C16 C15 C14 H15 180.0 180.1
C14 C15 C16 F19 180.2 180.0
C14 C15 C16 C17 0.2 360.0
H14 C14 C13 C18 179.9 180.1
C13 C14 H14 C15 180.0 179.9
H14 C14 C15 C16 179.9 180.0
H14 C14 C15 H15 359.9 359.9
C16 C15 C14 H14 179.9 180.0
C14 C15 C16 H15 180.0 179.9
C17 C16 C15 F19 180.0 180.0
C15 C16 C17 C18 359.8 360.0
C15 C16 C17 H17 179.8 180.0
H15 C15 C14 H14 359.9 359.9
C14 C15 H15 C16 180.0 180.1
H15 C15 C16 F19 0.2 0.0
H15 C15 C16 C17 180.2 180.1
F19 C16 C15 H15 0.2 0.0
C15 C16 F19 C17 180.0 180.0
F19 C16 C17 C18 179.8 180.0
F19 C16 C17 H17 359.8 0.0
C13 C18 C17 C16 0.0 0.1
C17 C16 C15 H15 180.2 180.1
C15 C16 C17 F19 180.0 180.0
C18 C17 C16 H17 180.0 180.0
C16 C17 C18 H18 180.0 180.0
C13 C18 C17 H18 180.0 180.1
C18 C17 C16 F19 179.8 180.0
C16 C17 C18 H17 180.0 180.0
H17 C17 C16 F19 359.8 0.0
C16 C17 H17 C18 180.0 180.0
H17 C17 C18 H18 0.0 360.0
C13 C18 H18 C17 180.0 179.9
H18 C18 C17 H17 0.0 360.0