PDB Chemical Component GFL

Ideal Model

Chemical Description

Name 2-AMINO-9-(2-DEOXY-2-FLUORO-5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)-1,9-DIHYDRO-6H-PURIN-6-ONE
Synonyms 2'-FLUORO-2-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
Formula C10 H13 F N5 O7 P
Formal charge 0
Molecular weight 365.212 g/mol
Component type DNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 37
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms O3P
Bond count 39
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2-amino-9-(2-deoxy-2-fluoro-5-O-phosphono-beta-D-arabinofuranosyl)-1,9-dihydro-6H-purin-6-one
Systematic name (OpenEye OEToolkits) [(2R,3R,4S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-4-fluoro-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]3F
SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3F
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)F)N=C(NC2=O)N
InChI descriptor InChI=1S/C10H13FN5O7P/c11-4-6(17)3(1-22-24(19,20)21)23-9(4)16-2-13-5-7(16)14-10(12)15-8(5)18/h2-4,6,9,17H,1H2,(H2,19,20,21)(H3,12,14,15,18)/t3-,4+,6-,9-/m1/s1
InChIKey descriptor ZTDPJNQLNRZPCT-AYQXTPAHSA-N

Status Information

Last modified 2011-06-04
Created 2006-09-07
Release status REL
Processing site RCSB