PDB Chemical Component GER

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GER

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.517 1.507
C1 H11 1.100 1.090
C1 H12 1.100 1.090
C1 H13 1.100 1.090
C2 C3 1.348 1.310
C2 H21 1.080 1.080
C3 C4 1.521 1.507
C3 C5 1.543 1.507
C4 H41 1.099 1.090
C4 H42 1.100 1.090
C4 H43 1.100 1.090
C5 C6 1.525 1.530
C5 H51 1.100 1.090
C5 H52 1.100 1.090
C6 C7 1.517 1.507
C6 H61 1.100 1.090
C6 H62 1.100 1.090
C7 C8 1.350 1.311
C7 H71 1.080 1.080
C8 C9 1.530 1.508
C8 C10 1.559 1.507
C9 H91 1.100 1.090
C9 H92 1.100 1.090
C9 H93 1.100 1.090
C10 C11 1.533 1.530
C10 H101 1.100 1.091
C10 H102 1.100 1.089
C11 C12 1.516 1.507
C11 H111 1.100 1.091
C11 H112 1.100 1.090
C12 C13 1.355 1.311
C12 H121 1.080 1.080
C13 C14 1.528 1.506
C13 C15 1.532 1.507
C14 H141 1.100 1.090
C14 H142 1.100 1.090
C14 H143 1.100 1.090
C15 C16 1.527 1.529
C15 H151 1.100 1.091
C15 H152 1.100 1.091
C16 C17 1.514 1.507
C16 H161 1.101 1.090
C16 H162 1.100 1.091
C17 C18 1.349 1.310
C17 H171 1.080 1.079
C18 C19 1.533 1.506
C18 C20 1.549 1.507
C19 H191 1.100 1.089
C19 H192 1.100 1.090
C19 H193 1.100 1.091
C20 H201 1.100 1.090
C20 H202 1.100 1.090
C20 H203 1.100 1.090

Bond Angles for GER

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 H11 109.5 109.4
C2 C1 H12 109.5 109.5
C2 C1 H13 109.5 109.4
C1 C2 C3 122.2 120.0
C1 C2 H21 118.9 120.0
H11 C1 H12 109.5 109.6
H11 C1 H13 109.5 109.5
H12 C1 H13 109.5 109.4
C3 C2 H21 118.9 120.0
C2 C3 C4 116.4 120.0
C2 C3 C5 120.3 120.0
C4 C3 C5 123.2 120.0
C3 C4 H41 109.5 109.4
C3 C4 H42 109.5 109.5
C3 C4 H43 109.5 109.5
C3 C5 C6 124.3 109.5
C3 C5 H51 104.8 109.4
C3 C5 H52 101.3 109.5
H41 C4 H42 109.5 109.5
H41 C4 H43 109.5 109.4
H42 C4 H43 109.5 109.5
C6 C5 H51 104.8 109.5
C6 C5 H52 101.3 109.5
C5 C6 C7 111.8 109.5
C5 C6 H61 108.7 109.5
C5 C6 H62 108.2 109.5
H51 C5 H52 122.0 109.5
C7 C6 H61 108.7 109.5
C7 C6 H62 108.2 109.4
C6 C7 C8 118.5 120.0
C6 C7 H71 120.8 120.0
H61 C6 H62 111.3 109.5
C8 C7 H71 120.8 120.0
C7 C8 C9 115.2 120.0
C7 C8 C10 116.3 120.0
C9 C8 C10 128.5 120.0
C8 C9 H91 109.5 109.4
C8 C9 H92 109.5 109.4
C8 C9 H93 109.4 109.4
C8 C10 C11 123.3 109.5
C8 C10 H101 105.1 109.5
C8 C10 H102 101.9 109.5
H91 C9 H92 109.4 109.5
H91 C9 H93 109.4 109.5
H92 C9 H93 109.5 109.5
C11 C10 H101 105.1 109.5
C11 C10 H102 101.9 109.5
C10 C11 C12 112.7 109.5
C10 C11 H111 108.4 109.5
C10 C11 H112 107.7 109.5
H101 C10 H102 121.0 109.4
C12 C11 H111 108.4 109.5
C12 C11 H112 107.7 109.5
C11 C12 C13 121.9 120.0
C11 C12 H121 119.0 120.0
H111 C11 H112 112.0 109.4
C13 C12 H121 119.1 120.0
C12 C13 C14 117.2 120.0
C12 C13 C15 120.6 120.0
C14 C13 C15 122.2 120.0
C13 C14 H141 109.5 109.5
C13 C14 H142 109.5 109.5
C13 C14 H143 109.4 109.5
C13 C15 C16 123.5 109.5
C13 C15 H151 105.1 109.4
C13 C15 H152 101.8 109.5
H141 C14 H142 109.4 109.5
H141 C14 H143 109.5 109.4
H142 C14 H143 109.5 109.5
C16 C15 H151 105.0 109.5
C16 C15 H152 101.7 109.5
C15 C16 C17 111.4 109.5
C15 C16 H161 108.8 109.5
C15 C16 H162 108.4 109.5
H151 C15 H152 121.3 109.4
C17 C16 H161 108.8 109.5
C17 C16 H162 108.4 109.4
C16 C17 C18 119.3 120.0
C16 C17 H171 120.4 120.0
H161 C16 H162 111.0 109.4
C18 C17 H171 120.3 120.0
C17 C18 C19 115.9 120.0
C17 C18 C20 114.9 120.0
C19 C18 C20 129.1 120.0
C18 C19 H191 109.5 109.5
C18 C19 H192 109.5 109.5
C18 C19 H193 109.5 109.5
C18 C20 H201 109.5 109.5
C18 C20 H202 109.4 109.4
C18 C20 H203 109.5 109.4
H191 C19 H192 109.5 109.5
H191 C19 H193 109.5 109.5
H192 C19 H193 109.5 109.4
H201 C20 H202 109.5 109.4
H201 C20 H203 109.5 109.5
H202 C20 H203 109.5 109.5

Torsion Angles for GER

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H11 C1 C2 H12 240.0 239.9
H11 C1 C2 H13 120.0 120.0
H12 C1 C2 H13 240.0 240.0
C3 C2 C1 H21 180.0 180.1
C1 C2 C3 C4 0.0 359.9
C1 C2 C3 C5 180.1 180.0
C2 C1 H11 H12 120.0 120.0
C2 C1 H11 H13 240.0 240.1
H11 C1 C2 C3 349.3 180.0
H11 C1 C2 H21 169.3 359.9
H12 C1 H11 H13 120.0 120.0
C2 C1 H12 H11 240.0 240.0
C2 C1 H12 H13 120.0 119.9
H12 C1 C2 C3 109.3 300.1
H12 C1 C2 H21 289.4 120.0
H11 C1 H12 H13 240.0 240.0
C2 C1 H13 H11 120.0 119.9
C2 C1 H13 H12 240.0 240.0
H13 C1 C2 C3 229.3 60.0
H13 C1 C2 H21 49.3 240.0
H11 C1 H13 H12 120.0 120.1
C3 C2 C1 H11 349.3 180.0
C3 C2 C1 H12 109.3 300.1
C3 C2 C1 H13 229.3 60.0
C1 C2 C3 H21 180.0 179.9
C4 C3 C2 C5 179.9 179.9
C2 C3 C4 H41 181.8 90.0
C2 C3 C4 H42 301.8 210.0
C2 C3 C4 H43 61.8 330.1
C2 C3 C5 C6 350.3 95.0
C2 C3 C5 H51 110.3 214.9
C2 C3 C5 H52 238.0 334.9
H21 C2 C1 H11 169.3 359.9
H21 C2 C1 H12 289.4 120.0
H21 C2 C1 H13 49.3 240.0
C1 C2 H21 C3 180.0 180.1
H21 C2 C3 C4 180.0 180.0
H21 C2 C3 C5 0.1 0.1
C4 C3 C2 H21 180.0 180.0
C2 C3 C4 C5 180.1 180.1
C4 C3 C5 C6 170.4 275.1
C4 C3 C5 H51 290.4 35.0
C4 C3 C5 H52 58.1 155.0
H41 C4 C3 H42 240.0 240.0
H41 C4 C3 H43 120.0 120.0
H42 C4 C3 H43 240.0 240.0
C5 C3 C2 H21 0.1 0.1
C2 C3 C5 C4 179.9 179.9
C5 C3 C4 H41 1.7 270.0
C5 C3 C4 H42 121.7 30.0
C5 C3 C4 H43 241.7 150.0
C6 C5 C3 H51 240.0 240.0
C6 C5 C3 H52 112.3 120.1
C3 C5 C6 C7 150.9 179.9
C3 C5 C6 H61 270.9 299.9
C3 C5 C6 H62 31.9 60.0
H51 C5 C3 H52 232.3 240.0
H41 C4 C3 C5 1.7 270.0
C3 C4 H41 H42 120.0 120.0
C3 C4 H41 H43 240.0 240.0
H42 C4 H41 H43 120.0 120.0
H42 C4 C3 C5 121.7 30.0
C3 C4 H42 H41 240.0 240.0
C3 C4 H42 H43 120.0 120.0
H41 C4 H42 H43 240.0 240.0
H43 C4 C3 C5 241.7 150.0
C3 C4 H43 H41 120.0 119.9
C3 C4 H43 H42 240.0 240.0
H41 C4 H43 H42 120.0 120.0
C3 C5 C6 H51 120.0 119.9
C3 C5 C6 H52 247.8 239.9
H51 C5 C6 H52 127.8 120.0
C7 C6 C5 H61 240.0 240.0
C7 C6 C5 H62 119.1 120.0
C5 C6 C7 C8 219.0 120.8
C5 C6 C7 H71 39.0 300.8
H61 C6 C5 H62 239.1 239.9
C3 C5 H51 C6 227.7 240.0
C3 C5 H51 H52 113.8 120.0
C6 C5 H51 H52 246.1 240.0
H51 C5 C6 C7 31.0 60.0
H51 C5 C6 H61 151.0 180.0
H51 C5 C6 H62 271.9 300.1
C3 C5 H52 C6 128.8 120.1
C3 C5 H52 H51 244.4 240.1
C6 C5 H52 H51 115.7 120.0
H52 C5 C6 C7 263.2 300.0
H52 C5 C6 H61 23.2 60.0
H52 C5 C6 H62 144.1 180.0
C7 C6 C5 H51 31.0 60.0
C7 C6 C5 H52 263.2 300.0
C5 C6 C7 H61 120.0 120.0
C5 C6 C7 H62 241.0 240.0
H61 C6 C7 H62 121.0 120.1
C8 C7 C6 H71 180.0 180.0
C6 C7 C8 C9 0.1 354.1
C6 C7 C8 C10 180.4 174.2
H61 C6 C5 H51 151.0 180.0
H61 C6 C5 H52 23.2 60.0
C5 C6 H61 C7 238.1 240.0
C5 C6 H61 H62 119.0 120.0
C7 C6 H61 H62 240.9 240.0
H61 C6 C7 C8 99.0 0.8
H61 C6 C7 H71 279.0 180.8
H62 C6 C5 H51 271.9 300.1
H62 C6 C5 H52 144.1 180.0
C5 C6 H62 C7 121.3 120.0
C5 C6 H62 H61 240.6 240.0
C7 C6 H62 H61 119.4 120.0
H62 C6 C7 C8 338.1 240.8
H62 C6 C7 H71 158.0 60.8
C8 C7 C6 H61 99.0 0.8
C8 C7 C6 H62 338.1 240.8
C6 C7 C8 H71 180.0 180.0
C9 C8 C7 C10 179.7 180.0
C7 C8 C9 H91 18.7 84.9
C7 C8 C9 H92 138.7 204.9
C7 C8 C9 H93 258.7 324.9
C7 C8 C10 C11 169.4 95.0
C7 C8 C10 H101 289.5 215.0
C7 C8 C10 H102 56.5 335.0
H71 C7 C6 H61 279.0 180.8
H71 C7 C6 H62 158.0 60.8
C6 C7 H71 C8 180.0 180.0
H71 C7 C8 C9 180.1 174.1
H71 C7 C8 C10 0.4 354.2
C9 C8 C7 H71 180.1 174.1
C7 C8 C9 C10 180.3 180.0
C9 C8 C10 C11 349.8 275.0
C9 C8 C10 H101 109.8 35.0
C9 C8 C10 H102 236.8 155.0
H91 C9 C8 H92 240.0 240.0
H91 C9 C8 H93 120.0 120.0
H92 C9 C8 H93 240.0 240.0
C10 C8 C7 H71 0.4 354.2
C7 C8 C10 C9 179.7 180.0
C10 C8 C9 H91 198.4 264.9
C10 C8 C9 H92 318.3 24.8
C10 C8 C9 H93 78.4 144.9
C11 C10 C8 H101 240.0 240.0
C11 C10 C8 H102 112.9 120.0
C8 C10 C11 C12 194.3 180.0
C8 C10 C11 H111 314.3 300.0
C8 C10 C11 H112 75.6 59.9
H101 C10 C8 H102 232.9 240.0
H91 C9 C8 C10 198.4 264.9
C8 C9 H91 H92 120.0 119.9
C8 C9 H91 H93 240.0 240.1
H92 C9 H91 H93 120.0 120.1
H92 C9 C8 C10 318.3 24.8
C8 C9 H92 H91 240.0 240.1
C8 C9 H92 H93 120.0 119.9
H91 C9 H92 H93 240.0 239.9
H93 C9 C8 C10 78.4 144.9
C8 C9 H93 H91 120.0 120.0
C8 C9 H93 H92 240.0 240.1
H91 C9 H93 H92 120.0 120.1
C8 C10 C11 H101 120.0 120.0
C8 C10 C11 H102 247.1 239.9
H101 C10 C11 H102 127.1 119.9
C12 C11 C10 H111 240.0 240.0
C12 C11 C10 H112 118.6 120.0
C10 C11 C12 C13 180.4 120.8
C10 C11 C12 H121 0.4 300.8
H111 C11 C10 H112 238.6 240.1
C8 C10 H101 C11 228.6 240.0
C8 C10 H101 H102 114.3 120.0
C11 C10 H101 H102 245.7 240.0
H101 C10 C11 C12 74.2 60.0
H101 C10 C11 H111 194.2 180.0
H101 C10 C11 H112 315.6 299.9
C8 C10 H102 C11 128.1 120.1
C8 C10 H102 H101 244.0 240.0
C11 C10 H102 H101 115.9 120.0
H102 C10 C11 C12 307.2 300.0
H102 C10 C11 H111 67.2 60.1
H102 C10 C11 H112 188.6 180.0
C12 C11 C10 H101 74.2 60.0
C12 C11 C10 H102 307.2 300.0
C10 C11 C12 H111 120.0 120.0
C10 C11 C12 H112 241.4 240.0
H111 C11 C12 H112 121.4 120.0
C13 C12 C11 H121 180.0 180.0
C11 C12 C13 C14 0.1 354.1
C11 C12 C13 C15 179.6 174.2
H111 C11 C10 H101 194.2 180.0
H111 C11 C10 H102 67.2 60.1
C10 C11 H111 C12 237.4 240.0
C10 C11 H111 H112 118.7 120.0
C12 C11 H111 H112 241.3 240.0
H111 C11 C12 C13 60.4 0.8
H111 C11 C12 H121 240.4 180.8
H112 C11 C10 H101 315.6 299.9
H112 C11 C10 H102 188.6 180.0
C10 C11 H112 C12 121.8 120.0
C10 C11 H112 H111 240.9 240.0
C12 C11 H112 H111 119.1 120.0
H112 C11 C12 C13 299.0 240.9
H112 C11 C12 H121 119.0 60.8
C13 C12 C11 H111 60.4 0.8
C13 C12 C11 H112 299.0 240.9
C11 C12 C13 H121 180.0 180.0
C14 C13 C12 C15 180.5 180.0
C12 C13 C14 H141 8.0 84.9
C12 C13 C14 H142 127.9 204.9
C12 C13 C14 H143 248.0 324.9
C12 C13 C15 C16 220.6 95.0
C12 C13 C15 H151 340.5 215.0
C12 C13 C15 H152 107.8 334.9
H121 C12 C11 H111 240.4 180.8
H121 C12 C11 H112 119.0 60.8
C11 C12 H121 C13 180.0 180.0
H121 C12 C13 C14 180.1 174.2
H121 C12 C13 C15 359.6 354.2
C14 C13 C12 H121 180.1 174.2
C12 C13 C14 C15 179.5 180.0
C14 C13 C15 C16 40.1 275.0
C14 C13 C15 H151 160.0 35.0
C14 C13 C15 H152 287.3 155.0
H141 C14 C13 H142 240.0 240.0
H141 C14 C13 H143 120.0 119.9
H142 C14 C13 H143 239.9 240.0
C15 C13 C12 H121 359.6 354.2
C12 C13 C15 C14 180.5 180.0
C15 C13 C14 H141 188.5 264.8
C15 C13 C14 H142 308.4 24.9
C15 C13 C14 H143 68.5 144.9
C16 C15 C13 H151 240.0 240.0
C16 C15 C13 H152 112.8 120.0
C13 C15 C16 C17 163.7 180.0
C13 C15 C16 H161 283.7 300.0
C13 C15 C16 H162 44.5 60.0
H151 C15 C13 H152 232.8 240.1
H141 C14 C13 C15 188.5 264.8
C13 C14 H141 H142 120.0 120.0
C13 C14 H141 H143 240.0 240.0
H142 C14 H141 H143 120.0 120.0
H142 C14 C13 C15 308.4 24.9
C13 C14 H142 H141 240.0 239.9
C13 C14 H142 H143 120.0 120.0
H141 C14 H142 H143 240.0 240.1
H143 C14 C13 C15 68.5 144.9
C13 C14 H143 H141 120.0 120.0
C13 C14 H143 H142 240.0 240.0
H141 C14 H143 H142 120.0 120.0
C13 C15 C16 H151 120.0 120.0
C13 C15 C16 H152 247.2 240.0
H151 C15 C16 H152 127.2 120.0
C17 C16 C15 H161 240.0 240.0
C17 C16 C15 H162 119.2 120.0
C15 C16 C17 C18 128.3 116.4
C15 C16 C17 H171 308.3 296.4
H161 C16 C15 H162 239.2 240.0
C13 C15 H151 C16 228.4 240.0
C13 C15 H151 H152 114.2 119.9
C16 C15 H151 H152 245.8 240.0
H151 C15 C16 C17 43.7 60.0
H151 C15 C16 H161 163.6 180.0
H151 C15 C16 H162 284.4 300.0
C13 C15 H152 C16 128.2 120.0
C13 C15 H152 H151 244.1 240.1
C16 C15 H152 H151 115.8 120.0
H152 C15 C16 C17 276.5 300.0
H152 C15 C16 H161 36.4 60.0
H152 C15 C16 H162 157.2 180.0
C17 C16 C15 H151 43.7 60.0
C17 C16 C15 H152 276.5 300.0
C15 C16 C17 H161 120.0 120.0
C15 C16 C17 H162 240.8 240.0
H161 C16 C17 H162 120.8 120.0
C18 C17 C16 H171 180.0 180.0
C16 C17 C18 C19 359.9 354.4
C16 C17 C18 C20 180.0 174.3
H161 C16 C15 H151 163.6 180.0
H161 C16 C15 H152 36.4 60.0
C15 C16 H161 C17 238.5 240.0
C15 C16 H161 H162 119.2 120.0
C17 C16 H161 H162 240.8 240.0
H161 C16 C17 C18 8.4 356.4
H161 C16 C17 H171 188.3 176.4
H162 C16 C15 H151 284.4 300.0
H162 C16 C15 H152 157.2 180.0
C15 C16 H162 C17 121.1 120.0
C15 C16 H162 H161 240.5 240.0
C17 C16 H162 H161 119.5 120.0
H162 C16 C17 C18 247.6 236.4
H162 C16 C17 H171 67.5 56.5
C18 C17 C16 H161 8.4 356.4
C18 C17 C16 H162 247.6 236.4
C16 C17 C18 H171 180.0 180.0
C19 C18 C17 C20 179.9 180.1
C17 C18 C19 H191 272.6 84.7
C17 C18 C19 H192 32.6 204.8
C17 C18 C19 H193 152.6 324.7
C17 C18 C20 H201 190.6 0.0
C17 C18 C20 H202 310.6 120.0
C17 C18 C20 H203 70.6 240.0
H171 C17 C16 H161 188.3 176.4
H171 C17 C16 H162 67.5 56.5
C16 C17 H171 C18 180.0 180.0
H171 C17 C18 C19 179.9 174.3
H171 C17 C18 C20 0.1 354.3
C19 C18 C17 H171 179.9 174.3
C17 C18 C19 C20 180.2 179.9
C19 C18 C20 H201 10.8 180.0
C19 C18 C20 H202 130.8 299.9
C19 C18 C20 H203 250.8 60.0
H191 C19 C18 H192 240.0 239.9
H191 C19 C18 H193 120.0 120.0
H192 C19 C18 H193 240.0 240.1
C20 C18 C17 H171 0.1 354.3
C17 C18 C20 C19 179.8 180.1
C20 C18 C19 H191 92.4 264.8
C20 C18 C19 H192 212.4 24.8
C20 C18 C19 H193 332.4 144.7
H201 C20 C18 H202 240.0 240.0
H201 C20 C18 H203 120.0 120.0
H202 C20 C18 H203 240.0 240.0
H191 C19 C18 C20 92.4 264.8
C18 C19 H191 H192 120.0 120.0
C18 C19 H191 H193 240.0 240.0
H192 C19 H191 H193 120.0 119.9
H192 C19 C18 C20 212.4 24.8
C18 C19 H192 H191 239.9 239.9
C18 C19 H192 H193 120.0 119.9
H191 C19 H192 H193 240.0 240.0
H193 C19 C18 C20 332.4 144.7
C18 C19 H193 H191 120.0 120.0
C18 C19 H193 H192 240.0 240.1
H191 C19 H193 H192 120.0 120.0
C18 C20 H201 H202 120.0 120.0
C18 C20 H201 H203 240.0 240.0
H202 C20 H201 H203 120.0 120.1
C18 C20 H202 H201 240.0 240.0
C18 C20 H202 H203 120.0 120.0
H201 C20 H202 H203 240.0 240.0
C18 C20 H203 H201 120.0 120.0
C18 C20 H203 H202 240.0 240.0
H201 C20 H203 H202 120.0 120.0