PDB Chemical Component GDU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GDU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C2 |
1.377 |
1.345 |
| N1 |
C6 |
1.391 |
1.369 |
| N1 |
C1D |
1.470 |
1.464 |
| C2 |
N3 |
1.363 |
1.346 |
| C2 |
O2 |
1.197 |
1.215 |
| N3 |
C4 |
1.387 |
1.347 |
| N3 |
HN3 |
1.019 |
0.970 |
| C4 |
C5 |
1.428 |
1.416 |
| C4 |
O4 |
1.228 |
1.218 |
| C5 |
C6 |
1.315 |
1.350 |
| C5 |
H5 |
1.104 |
1.080 |
| C6 |
H6 |
1.103 |
1.080 |
| C1D |
C2D |
1.519 |
1.550 |
| C1D |
O4D |
1.403 |
1.443 |
| C1D |
H1D |
1.115 |
1.090 |
| C2D |
O2D |
1.464 |
1.429 |
| C2D |
C3D |
1.566 |
1.551 |
| C2D |
H2D |
1.115 |
1.091 |
| O2D |
HO2' |
0.950 |
0.967 |
| C3D |
C4D |
1.521 |
1.540 |
| C3D |
O3D |
1.437 |
1.429 |
| C3D |
H3D |
1.115 |
1.090 |
| C4D |
O4D |
1.448 |
1.438 |
| C4D |
C5D |
1.515 |
1.530 |
| C4D |
H4D |
1.115 |
1.090 |
| O3D |
HO3' |
0.951 |
0.967 |
| C5D |
O5D |
1.456 |
1.428 |
| C5D |
H5'1 |
1.115 |
1.089 |
| C5D |
H5'2 |
1.116 |
1.090 |
| O5D |
PA |
1.630 |
1.608 |
| PA |
O1A |
1.491 |
1.480 |
| PA |
O2A |
1.483 |
1.610 |
| PA |
O3A |
1.670 |
1.610 |
| O2A |
HOA2 |
0.950 |
0.965 |
| O3A |
PB |
1.582 |
1.609 |
| PB |
O1B |
1.494 |
1.480 |
| PB |
O2B |
1.509 |
1.611 |
| PB |
O3B |
1.631 |
1.609 |
| O2B |
HOB2 |
0.950 |
0.967 |
| O3B |
C1' |
1.438 |
1.428 |
| C1' |
C2' |
1.522 |
1.529 |
| C1' |
O5' |
1.425 |
1.426 |
| C1' |
H1' |
1.115 |
1.091 |
| C2' |
C3' |
1.516 |
1.532 |
| C2' |
O2' |
1.431 |
1.429 |
| C2' |
H2' |
1.115 |
1.090 |
| C3' |
C4' |
1.526 |
1.533 |
| C3' |
O3' |
1.430 |
1.429 |
| C3' |
H3' |
1.115 |
1.090 |
| C4' |
C5' |
1.549 |
1.531 |
| C4' |
O4' |
1.425 |
1.428 |
| C4' |
H4' |
1.115 |
1.090 |
| C5' |
C6' |
1.518 |
1.530 |
| C5' |
O5' |
1.463 |
1.427 |
| C5' |
H5' |
1.114 |
1.089 |
| C6' |
O6' |
1.430 |
1.429 |
| C6' |
H6'1 |
1.116 |
1.090 |
| C6' |
H6'2 |
1.115 |
1.090 |
| O2' |
HO2A |
0.950 |
0.967 |
| O3' |
HO3A |
0.949 |
0.966 |
| O4' |
HO4' |
0.950 |
0.966 |
| O6' |
HO6' |
0.950 |
0.967 |
Bond Angles for GDU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
120.5 |
120.6 |
| C2 |
N1 |
C1D |
119.5 |
119.7 |
| N1 |
C2 |
N3 |
115.2 |
120.9 |
| N1 |
C2 |
O2 |
124.5 |
119.5 |
| C6 |
N1 |
C1D |
120.1 |
119.7 |
| N1 |
C6 |
C5 |
122.3 |
119.7 |
| N1 |
C6 |
H6 |
121.8 |
120.2 |
| N1 |
C1D |
C2D |
113.4 |
110.7 |
| N1 |
C1D |
O4D |
110.9 |
110.6 |
| N1 |
C1D |
H1D |
104.1 |
110.6 |
| N3 |
C2 |
O2 |
120.3 |
119.6 |
| C2 |
N3 |
C4 |
127.5 |
120.3 |
| C2 |
N3 |
HN3 |
115.2 |
119.8 |
| C4 |
N3 |
HN3 |
117.2 |
119.9 |
| N3 |
C4 |
C5 |
113.3 |
119.4 |
| N3 |
C4 |
O4 |
118.0 |
120.4 |
| C5 |
C4 |
O4 |
128.7 |
120.2 |
| C4 |
C5 |
C6 |
121.2 |
119.1 |
| C4 |
C5 |
H5 |
123.6 |
120.4 |
| C6 |
C5 |
H5 |
115.2 |
120.5 |
| C5 |
C6 |
H6 |
116.0 |
120.1 |
| C2D |
C1D |
O4D |
103.6 |
103.5 |
| C2D |
C1D |
H1D |
111.3 |
110.6 |
| C1D |
C2D |
O2D |
113.6 |
110.9 |
| C1D |
C2D |
C3D |
103.1 |
102.1 |
| C1D |
C2D |
H2D |
113.5 |
110.9 |
| O4D |
C1D |
H1D |
113.8 |
110.6 |
| C1D |
O4D |
C4D |
108.0 |
107.0 |
| O2D |
C2D |
C3D |
115.8 |
110.9 |
| O2D |
C2D |
H2D |
100.1 |
110.8 |
| C2D |
O2D |
HO2' |
113.6 |
106.8 |
| C3D |
C2D |
H2D |
111.2 |
111.0 |
| C2D |
C3D |
C4D |
101.8 |
104.1 |
| C2D |
C3D |
O3D |
116.0 |
110.5 |
| C2D |
C3D |
H3D |
109.7 |
110.5 |
| C4D |
C3D |
O3D |
107.1 |
110.8 |
| C4D |
C3D |
H3D |
118.1 |
110.5 |
| C3D |
C4D |
O4D |
108.1 |
107.4 |
| C3D |
C4D |
C5D |
118.3 |
109.9 |
| C3D |
C4D |
H4D |
106.4 |
109.9 |
| O3D |
C3D |
H3D |
104.6 |
110.4 |
| C3D |
O3D |
HO3' |
115.9 |
106.8 |
| O4D |
C4D |
C5D |
115.1 |
109.9 |
| O4D |
C4D |
H4D |
110.3 |
109.8 |
| C5D |
C4D |
H4D |
97.6 |
109.9 |
| C4D |
C5D |
O5D |
110.0 |
109.5 |
| C4D |
C5D |
H5'1 |
112.0 |
109.5 |
| C4D |
C5D |
H5'2 |
112.0 |
109.4 |
| O5D |
C5D |
H5'1 |
112.0 |
109.4 |
| O5D |
C5D |
H5'2 |
112.0 |
109.5 |
| C5D |
O5D |
PA |
121.2 |
106.8 |
| H5'1 |
C5D |
H5'2 |
98.4 |
109.5 |
| O5D |
PA |
O1A |
110.7 |
109.5 |
| O5D |
PA |
O2A |
113.9 |
109.5 |
| O5D |
PA |
O3A |
110.5 |
109.5 |
| O1A |
PA |
O2A |
105.8 |
109.5 |
| O1A |
PA |
O3A |
111.1 |
109.4 |
| O2A |
PA |
O3A |
104.7 |
109.4 |
| PA |
O2A |
HOA2 |
113.9 |
106.8 |
| PA |
O3A |
PB |
138.6 |
106.9 |
| O3A |
PB |
O1B |
109.5 |
109.5 |
| O3A |
PB |
O2B |
114.0 |
109.5 |
| O3A |
PB |
O3B |
107.7 |
109.5 |
| O1B |
PB |
O2B |
110.2 |
109.4 |
| O1B |
PB |
O3B |
111.0 |
109.5 |
| O2B |
PB |
O3B |
104.4 |
109.4 |
| PB |
O2B |
HOB2 |
113.9 |
106.8 |
| PB |
O3B |
C1' |
118.0 |
106.9 |
| O3B |
C1' |
C2' |
109.1 |
109.4 |
| O3B |
C1' |
O5' |
111.2 |
109.4 |
| O3B |
C1' |
H1' |
107.7 |
109.4 |
| C2' |
C1' |
O5' |
106.8 |
109.8 |
| C2' |
C1' |
H1' |
112.1 |
109.4 |
| C1' |
C2' |
C3' |
110.9 |
109.0 |
| C1' |
C2' |
O2' |
113.7 |
109.6 |
| C1' |
C2' |
H2' |
104.6 |
109.6 |
| O5' |
C1' |
H1' |
110.0 |
109.4 |
| C1' |
O5' |
C5' |
113.6 |
107.6 |
| C3' |
C2' |
O2' |
106.7 |
109.6 |
| C3' |
C2' |
H2' |
112.0 |
109.5 |
| C2' |
C3' |
C4' |
107.1 |
108.6 |
| C2' |
C3' |
O3' |
104.9 |
109.6 |
| C2' |
C3' |
H3' |
114.5 |
109.6 |
| O2' |
C2' |
H2' |
109.1 |
109.5 |
| C2' |
O2' |
HO2A |
113.7 |
106.8 |
| C4' |
C3' |
O3' |
111.5 |
109.7 |
| C4' |
C3' |
H3' |
108.3 |
109.7 |
| C3' |
C4' |
C5' |
106.7 |
109.0 |
| C3' |
C4' |
O4' |
112.5 |
109.5 |
| C3' |
C4' |
H4' |
108.6 |
109.6 |
| O3' |
C3' |
H3' |
110.5 |
109.5 |
| C3' |
O3' |
HO3A |
104.9 |
106.8 |
| C5' |
C4' |
O4' |
107.2 |
109.7 |
| C5' |
C4' |
H4' |
113.7 |
109.4 |
| C4' |
C5' |
C6' |
114.7 |
109.4 |
| C4' |
C5' |
O5' |
114.6 |
109.7 |
| C4' |
C5' |
H5' |
100.6 |
109.5 |
| O4' |
C4' |
H4' |
108.1 |
109.6 |
| C4' |
O4' |
HO4' |
112.5 |
106.8 |
| C6' |
C5' |
O5' |
105.0 |
109.4 |
| C6' |
C5' |
H5' |
111.0 |
109.5 |
| C5' |
C6' |
O6' |
111.1 |
109.4 |
| C5' |
C6' |
H6'1 |
111.6 |
109.5 |
| C5' |
C6' |
H6'2 |
111.6 |
109.4 |
| O5' |
C5' |
H5' |
111.1 |
109.4 |
| O6' |
C6' |
H6'1 |
111.6 |
109.5 |
| O6' |
C6' |
H6'2 |
111.6 |
109.5 |
| C6' |
O6' |
HO6' |
111.1 |
106.8 |
| H6'1 |
C6' |
H6'2 |
98.8 |
109.5 |
Torsion Angles for GDU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
N1 |
C2 |
C1D |
179.3 |
179.6 |
| C2 |
N1 |
C6 |
C5 |
1.3 |
0.3 |
| C2 |
N1 |
C6 |
H6 |
181.3 |
180.2 |
| C2 |
N1 |
C1D |
C2D |
129.4 |
304.1 |
| C2 |
N1 |
C1D |
O4D |
245.5 |
58.2 |
| C2 |
N1 |
C1D |
H1D |
8.2 |
181.1 |
| N3 |
C2 |
N1 |
O2 |
180.9 |
179.5 |
| N1 |
C2 |
N3 |
C4 |
357.9 |
0.5 |
| N1 |
C2 |
N3 |
HN3 |
178.0 |
180.3 |
| C2 |
N1 |
C6 |
C1D |
180.7 |
180.4 |
| C6 |
N1 |
C2 |
N3 |
359.8 |
359.4 |
| C6 |
N1 |
C2 |
O2 |
178.9 |
180.0 |
| C6 |
N1 |
C1D |
C2D |
310.0 |
124.4 |
| C6 |
N1 |
C1D |
O4D |
66.2 |
238.6 |
| C6 |
N1 |
C1D |
H1D |
188.9 |
1.5 |
| C4 |
C5 |
C6 |
N1 |
359.6 |
359.9 |
| N1 |
C6 |
C5 |
H5 |
179.6 |
180.0 |
| C5 |
C6 |
N1 |
H6 |
180.0 |
180.1 |
| C2 |
N1 |
C1D |
C6 |
179.3 |
179.6 |
| C1D |
N1 |
C2 |
N3 |
180.5 |
179.8 |
| C1D |
N1 |
C2 |
O2 |
359.6 |
0.3 |
| C1D |
N1 |
C6 |
C5 |
180.6 |
180.0 |
| C1D |
N1 |
C6 |
H6 |
0.6 |
359.8 |
| C2D |
C1D |
N1 |
O4D |
243.9 |
245.9 |
| C2D |
C1D |
N1 |
H1D |
121.1 |
123.0 |
| N1 |
C1D |
C2D |
O2D |
284.6 |
273.8 |
| N1 |
C1D |
C2D |
C3D |
158.5 |
155.7 |
| N1 |
C1D |
C2D |
H2D |
38.2 |
37.4 |
| O4D |
C1D |
N1 |
H1D |
237.3 |
237.1 |
| N1 |
C1D |
O4D |
C4D |
200.3 |
201.3 |
| N3 |
C2 |
N1 |
C6 |
359.8 |
359.4 |
| N3 |
C2 |
N1 |
C1D |
180.5 |
179.8 |
| N1 |
C2 |
N3 |
O2 |
179.1 |
180.5 |
| C4 |
N3 |
C2 |
HN3 |
180.0 |
180.2 |
| C2 |
N3 |
C4 |
C5 |
2.9 |
359.8 |
| C2 |
N3 |
C4 |
O4 |
181.7 |
179.7 |
| O2 |
C2 |
N1 |
C6 |
178.9 |
180.0 |
| O2 |
C2 |
N1 |
C1D |
359.6 |
0.3 |
| N1 |
C2 |
O2 |
N3 |
181.0 |
179.5 |
| O2 |
C2 |
N3 |
C4 |
178.8 |
180.0 |
| O2 |
C2 |
N3 |
HN3 |
358.9 |
359.8 |
| C4 |
N3 |
C2 |
O2 |
178.8 |
180.0 |
| C2 |
N3 |
C4 |
HN3 |
180.0 |
179.8 |
| C5 |
C4 |
N3 |
O4 |
181.2 |
180.0 |
| N3 |
C4 |
C5 |
C6 |
358.5 |
0.0 |
| N3 |
C4 |
C5 |
H5 |
178.5 |
180.0 |
| HN3 |
N3 |
C2 |
O2 |
358.9 |
359.8 |
| C2 |
N3 |
HN3 |
C4 |
180.0 |
180.2 |
| HN3 |
N3 |
C4 |
C5 |
182.8 |
180.0 |
| HN3 |
N3 |
C4 |
O4 |
1.6 |
359.9 |
| N1 |
C6 |
C5 |
C4 |
359.6 |
359.9 |
| C5 |
C4 |
N3 |
HN3 |
182.8 |
180.0 |
| N3 |
C4 |
C5 |
O4 |
178.6 |
180.0 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
H6 |
179.6 |
180.0 |
| O4 |
C4 |
N3 |
HN3 |
1.6 |
359.9 |
| N3 |
C4 |
O4 |
C5 |
181.4 |
180.0 |
| O4 |
C4 |
C5 |
C6 |
179.9 |
180.1 |
| O4 |
C4 |
C5 |
H5 |
359.9 |
0.0 |
| C5 |
C6 |
N1 |
C1D |
180.6 |
180.0 |
| N1 |
C6 |
C5 |
H6 |
180.0 |
179.9 |
| C6 |
C5 |
C4 |
O4 |
179.9 |
180.1 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
| H5 |
C5 |
C4 |
O4 |
359.9 |
0.0 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
| H5 |
C5 |
C6 |
H6 |
359.6 |
0.1 |
| H6 |
C6 |
N1 |
C1D |
0.6 |
359.8 |
| N1 |
C6 |
H6 |
C5 |
180.0 |
180.1 |
| H6 |
C6 |
C5 |
H5 |
359.6 |
0.1 |
| N1 |
C1D |
C2D |
O4D |
120.3 |
118.6 |
| N1 |
C1D |
C2D |
H1D |
243.0 |
237.1 |
| O4D |
C1D |
C2D |
H1D |
122.7 |
118.5 |
| C2D |
C1D |
O4D |
C4D |
322.3 |
320.0 |
| O2D |
C2D |
C1D |
C3D |
126.1 |
118.2 |
| O2D |
C2D |
C1D |
H2D |
246.5 |
236.4 |
| C1D |
C2D |
O2D |
HO2' |
180.0 |
180.0 |
| C3D |
C2D |
C1D |
H2D |
120.4 |
118.3 |
| C1D |
C2D |
C3D |
C4D |
335.8 |
339.0 |
| C1D |
C2D |
C3D |
O3D |
91.7 |
98.0 |
| C1D |
C2D |
C3D |
H3D |
209.9 |
220.4 |
| N1 |
C1D |
O4D |
C2D |
238.0 |
241.4 |
| N1 |
C1D |
O4D |
H1D |
117.0 |
122.9 |
| C2D |
C1D |
O4D |
H1D |
239.0 |
241.5 |
| O4D |
C1D |
C2D |
O2D |
164.3 |
155.3 |
| O4D |
C1D |
C2D |
C3D |
38.2 |
37.1 |
| O4D |
C1D |
C2D |
H2D |
277.8 |
278.8 |
| C3D |
C4D |
O4D |
C1D |
22.0 |
26.4 |
| C1D |
O4D |
C4D |
C5D |
156.8 |
146.0 |
| C1D |
O4D |
C4D |
H4D |
266.0 |
266.9 |
| N1 |
C1D |
H1D |
C2D |
122.5 |
123.0 |
| N1 |
C1D |
H1D |
O4D |
239.2 |
237.1 |
| C2D |
C1D |
H1D |
O4D |
116.6 |
114.1 |
| H1D |
C1D |
C2D |
O2D |
41.6 |
36.8 |
| H1D |
C1D |
C2D |
C3D |
275.6 |
278.6 |
| H1D |
C1D |
C2D |
H2D |
155.2 |
160.3 |
| H1D |
C1D |
O4D |
C4D |
83.3 |
78.5 |
| O2D |
C2D |
C1D |
O4D |
164.3 |
155.3 |
| O2D |
C2D |
C1D |
H1D |
41.6 |
36.8 |
| C1D |
C2D |
O2D |
C3D |
240.9 |
247.3 |
| C1D |
C2D |
O2D |
H2D |
121.3 |
123.6 |
| C3D |
C2D |
O2D |
H2D |
240.4 |
236.3 |
| O2D |
C2D |
C3D |
C4D |
211.1 |
220.8 |
| O2D |
C2D |
C3D |
O3D |
327.0 |
339.8 |
| O2D |
C2D |
C3D |
H3D |
85.2 |
102.2 |
| C3D |
C2D |
C1D |
O4D |
38.2 |
37.1 |
| C3D |
C2D |
C1D |
H1D |
275.6 |
278.6 |
| C1D |
C2D |
C3D |
O2D |
124.7 |
118.2 |
| C1D |
C2D |
C3D |
H2D |
238.1 |
241.8 |
| O2D |
C2D |
C3D |
H2D |
113.4 |
123.7 |
| C3D |
C2D |
O2D |
HO2' |
299.1 |
292.7 |
| C4D |
C3D |
C2D |
O3D |
244.2 |
241.1 |
| C4D |
C3D |
C2D |
H3D |
125.9 |
118.6 |
| C2D |
C3D |
C4D |
O4D |
2.8 |
358.1 |
| C2D |
C3D |
C4D |
C5D |
229.7 |
238.6 |
| C2D |
C3D |
C4D |
H4D |
121.3 |
117.5 |
| O3D |
C3D |
C2D |
H3D |
241.7 |
237.5 |
| C2D |
C3D |
O3D |
HO3' |
180.0 |
61.5 |
| H2D |
C2D |
C1D |
O4D |
277.8 |
278.8 |
| H2D |
C2D |
C1D |
H1D |
155.2 |
160.3 |
| C1D |
C2D |
H2D |
O2D |
238.6 |
236.4 |
| C1D |
C2D |
H2D |
C3D |
115.7 |
112.7 |
| O2D |
C2D |
H2D |
C3D |
237.1 |
236.3 |
| H2D |
C2D |
O2D |
HO2' |
58.7 |
56.4 |
| H2D |
C2D |
C3D |
C4D |
97.8 |
97.2 |
| H2D |
C2D |
C3D |
O3D |
213.6 |
216.1 |
| H2D |
C2D |
C3D |
H3D |
331.9 |
338.6 |
| HO2' |
O2D |
C2D |
C3D |
299.1 |
292.7 |
| HO2' |
O2D |
C2D |
H2D |
58.7 |
56.4 |
| C1D |
O4D |
C4D |
C3D |
22.0 |
26.4 |
| C4D |
C3D |
C2D |
H2D |
97.8 |
97.2 |
| C2D |
C3D |
C4D |
O3D |
122.1 |
118.7 |
| C2D |
C3D |
C4D |
H3D |
239.8 |
241.4 |
| O3D |
C3D |
C4D |
H3D |
117.7 |
122.7 |
| C4D |
C3D |
O3D |
HO3' |
292.8 |
176.2 |
| O4D |
C4D |
C3D |
C5D |
133.1 |
119.5 |
| O4D |
C4D |
C3D |
H4D |
241.5 |
240.5 |
| C5D |
C4D |
C3D |
H4D |
108.4 |
121.0 |
| C3D |
C4D |
C5D |
O5D |
264.2 |
179.7 |
| C3D |
C4D |
C5D |
H5'1 |
29.5 |
59.7 |
| C3D |
C4D |
C5D |
H5'2 |
138.9 |
299.7 |
| O3D |
C3D |
C2D |
H2D |
213.6 |
216.1 |
| C2D |
C3D |
O3D |
C4D |
247.2 |
245.2 |
| C2D |
C3D |
O3D |
H3D |
121.0 |
122.5 |
| C4D |
C3D |
O3D |
H3D |
233.8 |
237.3 |
| O3D |
C3D |
C4D |
O4D |
240.7 |
239.4 |
| O3D |
C3D |
C4D |
C5D |
107.5 |
119.9 |
| O3D |
C3D |
C4D |
H4D |
359.2 |
358.8 |
| H3D |
C3D |
C2D |
H2D |
331.9 |
338.6 |
| C2D |
C3D |
H3D |
C4D |
116.0 |
114.6 |
| C2D |
C3D |
H3D |
O3D |
234.9 |
237.5 |
| C4D |
C3D |
H3D |
O3D |
119.0 |
122.9 |
| H3D |
C3D |
C4D |
O4D |
123.0 |
116.7 |
| H3D |
C3D |
C4D |
C5D |
349.9 |
357.2 |
| H3D |
C3D |
C4D |
H4D |
241.5 |
236.2 |
| H3D |
C3D |
O3D |
HO3' |
59.0 |
299.0 |
| C4D |
O4D |
C1D |
H1D |
83.3 |
78.5 |
| O4D |
C4D |
C3D |
O3D |
240.7 |
239.4 |
| O4D |
C4D |
C3D |
H3D |
123.0 |
116.7 |
| C3D |
C4D |
O4D |
C5D |
225.2 |
240.4 |
| C3D |
C4D |
O4D |
H4D |
116.0 |
119.5 |
| C5D |
C4D |
O4D |
H4D |
250.8 |
239.1 |
| O4D |
C4D |
C5D |
O5D |
134.2 |
61.7 |
| O4D |
C4D |
C5D |
H5'1 |
259.5 |
301.7 |
| O4D |
C4D |
C5D |
H5'2 |
8.9 |
181.7 |
| C5D |
C4D |
C3D |
O3D |
107.5 |
119.9 |
| C5D |
C4D |
C3D |
H3D |
349.9 |
357.2 |
| C3D |
C4D |
C5D |
O4D |
130.0 |
118.0 |
| C3D |
C4D |
C5D |
H4D |
246.7 |
238.9 |
| O4D |
C4D |
C5D |
H4D |
116.7 |
120.9 |
| O5D |
C5D |
C4D |
H5'1 |
234.8 |
120.0 |
| O5D |
C5D |
C4D |
H5'2 |
125.3 |
240.0 |
| C4D |
C5D |
O5D |
PA |
136.5 |
180.0 |
| H5'1 |
C5D |
C4D |
H5'2 |
250.5 |
120.0 |
| H4D |
C4D |
C3D |
O3D |
359.2 |
358.8 |
| H4D |
C4D |
C3D |
H3D |
241.5 |
236.2 |
| C3D |
C4D |
H4D |
O4D |
242.9 |
242.0 |
| C3D |
C4D |
H4D |
C5D |
122.5 |
121.1 |
| O4D |
C4D |
H4D |
C5D |
239.6 |
239.1 |
| H4D |
C4D |
C5D |
O5D |
17.5 |
300.7 |
| H4D |
C4D |
C5D |
H5'1 |
142.7 |
180.7 |
| H4D |
C4D |
C5D |
H5'2 |
252.2 |
60.8 |
| HO3' |
O3D |
C3D |
H3D |
59.0 |
299.0 |
| O5D |
C5D |
C4D |
H4D |
17.5 |
300.7 |
| C4D |
C5D |
O5D |
H5'1 |
125.3 |
240.0 |
| C4D |
C5D |
O5D |
H5'2 |
234.7 |
120.0 |
| H5'1 |
C5D |
O5D |
H5'2 |
109.4 |
240.0 |
| C5D |
O5D |
PA |
O1A |
60.4 |
300.0 |
| C5D |
O5D |
PA |
O2A |
179.5 |
60.1 |
| C5D |
O5D |
PA |
O3A |
296.9 |
180.0 |
| H5'1 |
C5D |
C4D |
H4D |
142.7 |
180.7 |
| C4D |
C5D |
H5'1 |
O5D |
235.8 |
120.1 |
| C4D |
C5D |
H5'1 |
H5'2 |
117.9 |
240.0 |
| O5D |
C5D |
H5'1 |
H5'2 |
242.1 |
120.0 |
| H5'1 |
C5D |
O5D |
PA |
11.2 |
300.0 |
| H5'2 |
C5D |
C4D |
H4D |
252.2 |
60.8 |
| C4D |
C5D |
H5'2 |
O5D |
124.2 |
239.9 |
| C4D |
C5D |
H5'2 |
H5'1 |
242.0 |
120.0 |
| O5D |
C5D |
H5'2 |
H5'1 |
117.9 |
240.1 |
| H5'2 |
C5D |
O5D |
PA |
261.8 |
60.0 |
| PA |
O5D |
C5D |
H5'1 |
11.2 |
300.0 |
| PA |
O5D |
C5D |
H5'2 |
261.8 |
60.0 |
| O1A |
PA |
O5D |
O2A |
240.9 |
240.0 |
| O1A |
PA |
O5D |
O3A |
123.5 |
120.0 |
| O2A |
PA |
O5D |
O3A |
242.6 |
240.0 |
| O5D |
PA |
O2A |
HOA2 |
180.0 |
60.0 |
| O5D |
PA |
O3A |
PB |
340.7 |
180.0 |
| O5D |
PA |
O1A |
O2A |
123.9 |
120.0 |
| O5D |
PA |
O1A |
O3A |
236.9 |
239.9 |
| O2A |
PA |
O1A |
O3A |
113.0 |
119.9 |
| O1A |
PA |
O2A |
HOA2 |
301.9 |
180.0 |
| O1A |
PA |
O3A |
PB |
217.4 |
60.0 |
| O5D |
PA |
O2A |
O1A |
238.2 |
239.9 |
| O5D |
PA |
O2A |
O3A |
120.8 |
120.0 |
| O1A |
PA |
O2A |
O3A |
242.6 |
240.1 |
| O2A |
PA |
O3A |
PB |
103.7 |
300.0 |
| O5D |
PA |
O3A |
O1A |
123.3 |
120.0 |
| O5D |
PA |
O3A |
O2A |
237.0 |
240.0 |
| O1A |
PA |
O3A |
O2A |
113.7 |
119.9 |
| O3A |
PA |
O2A |
HOA2 |
59.3 |
299.9 |
| PA |
O3A |
PB |
O1B |
328.6 |
300.0 |
| PA |
O3A |
PB |
O2B |
92.5 |
60.0 |
| PA |
O3A |
PB |
O3B |
207.8 |
180.0 |
| HOA2 |
O2A |
PA |
O3A |
59.3 |
299.9 |
| O1B |
PB |
O3A |
O2B |
236.1 |
240.0 |
| O1B |
PB |
O3A |
O3B |
120.8 |
120.1 |
| O2B |
PB |
O3A |
O3B |
244.7 |
240.0 |
| O3A |
PB |
O2B |
HOB2 |
180.0 |
60.0 |
| O3A |
PB |
O3B |
C1' |
23.2 |
180.0 |
| O3A |
PB |
O1B |
O2B |
126.1 |
120.0 |
| O3A |
PB |
O1B |
O3B |
241.2 |
239.9 |
| O2B |
PB |
O1B |
O3B |
115.1 |
120.0 |
| O1B |
PB |
O2B |
HOB2 |
303.6 |
180.0 |
| O1B |
PB |
O3B |
C1' |
263.3 |
59.9 |
| O3A |
PB |
O2B |
O1B |
236.4 |
240.0 |
| O3A |
PB |
O2B |
O3B |
117.2 |
120.0 |
| O1B |
PB |
O2B |
O3B |
240.8 |
240.0 |
| O2B |
PB |
O3B |
C1' |
144.7 |
300.0 |
| O3A |
PB |
O3B |
O1B |
119.9 |
120.1 |
| O3A |
PB |
O3B |
O2B |
238.5 |
240.0 |
| O1B |
PB |
O3B |
O2B |
118.7 |
120.0 |
| O3B |
PB |
O2B |
HOB2 |
62.8 |
300.0 |
| PB |
O3B |
C1' |
C2' |
192.9 |
210.4 |
| PB |
O3B |
C1' |
O5' |
75.3 |
90.0 |
| PB |
O3B |
C1' |
H1' |
314.7 |
330.2 |
| HOB2 |
O2B |
PB |
O3B |
62.8 |
300.0 |
| C2' |
C1' |
O3B |
O5' |
117.6 |
120.4 |
| C2' |
C1' |
O3B |
H1' |
238.1 |
240.1 |
| O3B |
C1' |
C2' |
C3' |
303.7 |
301.2 |
| O3B |
C1' |
C2' |
O2' |
63.9 |
61.1 |
| O3B |
C1' |
C2' |
H2' |
182.8 |
181.3 |
| O5' |
C1' |
O3B |
H1' |
120.6 |
119.7 |
| O3B |
C1' |
O5' |
C5' |
62.2 |
52.5 |
| O3B |
C1' |
C2' |
O5' |
239.7 |
239.9 |
| O3B |
C1' |
C2' |
H1' |
119.2 |
119.8 |
| O5' |
C1' |
C2' |
H1' |
239.5 |
239.9 |
| C2' |
C1' |
O5' |
C5' |
303.3 |
292.4 |
| C3' |
C2' |
C1' |
O2' |
239.8 |
240.0 |
| C3' |
C2' |
C1' |
H2' |
121.0 |
119.8 |
| C1' |
C2' |
C3' |
C4' |
294.1 |
306.2 |
| C1' |
C2' |
C3' |
O3' |
175.6 |
186.3 |
| C1' |
C2' |
C3' |
H3' |
54.3 |
66.1 |
| O2' |
C2' |
C1' |
H2' |
241.1 |
239.8 |
| C1' |
C2' |
O2' |
HO2A |
180.0 |
60.0 |
| O3B |
C1' |
O5' |
C2' |
119.0 |
120.2 |
| O3B |
C1' |
O5' |
H1' |
240.8 |
240.3 |
| C2' |
C1' |
O5' |
H1' |
121.8 |
120.1 |
| O5' |
C1' |
C2' |
C3' |
64.0 |
61.3 |
| O5' |
C1' |
C2' |
O2' |
184.2 |
181.3 |
| O5' |
C1' |
C2' |
H2' |
303.1 |
301.5 |
| C4' |
C5' |
O5' |
C1' |
54.7 |
67.6 |
| C6' |
C5' |
O5' |
C1' |
181.4 |
187.6 |
| C1' |
O5' |
C5' |
H5' |
301.4 |
307.5 |
| O3B |
C1' |
H1' |
C2' |
239.9 |
240.1 |
| O3B |
C1' |
H1' |
O5' |
121.3 |
119.8 |
| C2' |
C1' |
H1' |
O5' |
241.4 |
239.6 |
| H1' |
C1' |
C2' |
C3' |
184.5 |
181.4 |
| H1' |
C1' |
C2' |
O2' |
304.7 |
301.3 |
| H1' |
C1' |
C2' |
H2' |
63.5 |
61.5 |
| H1' |
C1' |
O5' |
C5' |
181.5 |
172.3 |
| C3' |
C2' |
C1' |
O5' |
64.0 |
61.3 |
| C3' |
C2' |
C1' |
H1' |
184.5 |
181.4 |
| C1' |
C2' |
C3' |
O2' |
124.3 |
119.9 |
| C1' |
C2' |
C3' |
H2' |
243.5 |
240.1 |
| O2' |
C2' |
C3' |
H2' |
119.3 |
120.2 |
| C3' |
C2' |
O2' |
HO2A |
302.5 |
179.5 |
| C4' |
C3' |
C2' |
O3' |
118.6 |
119.9 |
| C4' |
C3' |
C2' |
H3' |
239.9 |
240.2 |
| C2' |
C3' |
C4' |
C5' |
56.7 |
53.8 |
| C2' |
C3' |
C4' |
O4' |
299.4 |
293.8 |
| C2' |
C3' |
C4' |
H4' |
179.7 |
173.5 |
| O3' |
C3' |
C2' |
H3' |
121.3 |
120.3 |
| C2' |
C3' |
O3' |
HO3A |
180.0 |
300.0 |
| O2' |
C2' |
C1' |
O5' |
184.2 |
181.3 |
| O2' |
C2' |
C1' |
H1' |
304.7 |
301.3 |
| C1' |
C2' |
O2' |
C3' |
237.5 |
240.4 |
| C1' |
C2' |
O2' |
H2' |
116.3 |
120.2 |
| C3' |
C2' |
O2' |
H2' |
238.8 |
239.8 |
| O2' |
C2' |
C3' |
C4' |
169.9 |
186.3 |
| O2' |
C2' |
C3' |
O3' |
51.3 |
66.4 |
| O2' |
C2' |
C3' |
H3' |
290.0 |
306.1 |
| H2' |
C2' |
C1' |
O5' |
303.1 |
301.5 |
| H2' |
C2' |
C1' |
H1' |
63.5 |
61.5 |
| C1' |
C2' |
H2' |
C3' |
120.2 |
119.5 |
| C1' |
C2' |
H2' |
O2' |
238.0 |
239.8 |
| C3' |
C2' |
H2' |
O2' |
117.8 |
120.3 |
| H2' |
C2' |
C3' |
C4' |
50.6 |
66.1 |
| H2' |
C2' |
C3' |
O3' |
292.0 |
306.2 |
| H2' |
C2' |
C3' |
H3' |
170.7 |
186.0 |
| H2' |
C2' |
O2' |
HO2A |
63.7 |
299.7 |
| C4' |
C3' |
C2' |
O2' |
169.9 |
186.3 |
| C4' |
C3' |
C2' |
H2' |
50.6 |
66.1 |
| C2' |
C3' |
C4' |
O3' |
245.8 |
240.2 |
| C2' |
C3' |
C4' |
H3' |
124.0 |
119.8 |
| O3' |
C3' |
C4' |
H3' |
238.2 |
239.6 |
| C4' |
C3' |
O3' |
HO3A |
64.4 |
180.8 |
| C5' |
C4' |
C3' |
O4' |
117.3 |
120.1 |
| C5' |
C4' |
C3' |
H4' |
237.0 |
240.3 |
| C3' |
C4' |
C5' |
C6' |
185.7 |
178.6 |
| C3' |
C4' |
C5' |
O5' |
307.3 |
298.6 |
| C3' |
C4' |
C5' |
H5' |
66.6 |
58.7 |
| O4' |
C4' |
C3' |
H4' |
119.7 |
120.2 |
| C3' |
C4' |
O4' |
HO4' |
180.0 |
300.0 |
| O3' |
C3' |
C2' |
O2' |
51.3 |
66.4 |
| O3' |
C3' |
C2' |
H2' |
292.0 |
306.2 |
| C2' |
C3' |
O3' |
C4' |
115.6 |
119.2 |
| C2' |
C3' |
O3' |
H3' |
236.1 |
239.7 |
| C4' |
C3' |
O3' |
H3' |
120.5 |
120.5 |
| O3' |
C3' |
C4' |
C5' |
171.0 |
173.7 |
| O3' |
C3' |
C4' |
O4' |
53.6 |
53.6 |
| O3' |
C3' |
C4' |
H4' |
294.0 |
293.4 |
| H3' |
C3' |
C2' |
O2' |
290.0 |
306.1 |
| H3' |
C3' |
C2' |
H2' |
170.7 |
186.0 |
| C2' |
C3' |
H3' |
C4' |
240.6 |
240.8 |
| C2' |
C3' |
H3' |
O3' |
118.2 |
120.3 |
| C4' |
C3' |
H3' |
O3' |
237.6 |
239.5 |
| H3' |
C3' |
C4' |
C5' |
292.7 |
294.0 |
| H3' |
C3' |
C4' |
O4' |
175.4 |
174.0 |
| H3' |
C3' |
C4' |
H4' |
55.7 |
53.7 |
| H3' |
C3' |
O3' |
HO3A |
303.9 |
60.3 |
| C1' |
O5' |
C5' |
C4' |
54.7 |
67.6 |
| C5' |
C4' |
C3' |
O3' |
171.0 |
173.7 |
| C5' |
C4' |
C3' |
H3' |
292.7 |
294.0 |
| C3' |
C4' |
C5' |
O4' |
239.2 |
240.0 |
| C3' |
C4' |
C5' |
H4' |
119.8 |
119.8 |
| O4' |
C4' |
C5' |
H4' |
240.5 |
239.7 |
| C5' |
C4' |
O4' |
HO4' |
62.9 |
180.4 |
| C6' |
C5' |
C4' |
O5' |
238.4 |
240.0 |
| C6' |
C5' |
C4' |
H5' |
119.1 |
119.9 |
| C4' |
C5' |
C6' |
O6' |
64.1 |
180.1 |
| C4' |
C5' |
C6' |
H6'1 |
189.3 |
60.1 |
| C4' |
C5' |
C6' |
H6'2 |
298.8 |
300.1 |
| O5' |
C5' |
C4' |
H5' |
240.7 |
240.0 |
| O4' |
C4' |
C3' |
O3' |
53.6 |
53.6 |
| O4' |
C4' |
C3' |
H3' |
175.4 |
174.0 |
| C3' |
C4' |
O4' |
C5' |
117.0 |
119.6 |
| C3' |
C4' |
O4' |
H4' |
240.1 |
239.8 |
| C5' |
C4' |
O4' |
H4' |
123.0 |
120.2 |
| O4' |
C4' |
C5' |
C6' |
306.5 |
298.6 |
| O4' |
C4' |
C5' |
O5' |
68.1 |
58.6 |
| O4' |
C4' |
C5' |
H5' |
187.3 |
178.6 |
| H4' |
C4' |
C3' |
O3' |
294.0 |
293.4 |
| H4' |
C4' |
C3' |
H3' |
55.7 |
53.7 |
| C3' |
C4' |
H4' |
C5' |
241.3 |
240.6 |
| C3' |
C4' |
H4' |
O4' |
122.3 |
120.2 |
| C5' |
C4' |
H4' |
O4' |
241.0 |
239.6 |
| H4' |
C4' |
C5' |
C6' |
66.0 |
58.9 |
| H4' |
C4' |
C5' |
O5' |
187.5 |
178.9 |
| H4' |
C4' |
C5' |
H5' |
306.8 |
298.9 |
| H4' |
C4' |
O4' |
HO4' |
299.9 |
60.2 |
| C1' |
O5' |
C5' |
C6' |
181.4 |
187.6 |
| C6' |
C5' |
C4' |
O4' |
306.5 |
298.6 |
| C6' |
C5' |
C4' |
H4' |
66.0 |
58.9 |
| C4' |
C5' |
C6' |
O5' |
126.7 |
120.2 |
| C4' |
C5' |
C6' |
H5' |
246.8 |
240.1 |
| O5' |
C5' |
C6' |
H5' |
120.1 |
119.8 |
| O6' |
C6' |
C5' |
H6'1 |
234.7 |
120.0 |
| O6' |
C6' |
C5' |
H6'2 |
125.3 |
240.0 |
| C5' |
C6' |
O6' |
HO6' |
180.0 |
180.0 |
| H6'1 |
C6' |
C5' |
H6'2 |
250.5 |
120.0 |
| C5' |
O5' |
C1' |
H1' |
181.5 |
172.3 |
| O5' |
C5' |
C4' |
O4' |
68.1 |
58.6 |
| O5' |
C5' |
C4' |
H4' |
187.5 |
178.9 |
| C4' |
C5' |
O5' |
C6' |
233.2 |
240.0 |
| C4' |
C5' |
O5' |
H5' |
113.2 |
120.1 |
| C6' |
C5' |
O5' |
H5' |
240.0 |
240.1 |
| O5' |
C5' |
C6' |
O6' |
297.4 |
59.9 |
| O5' |
C5' |
C6' |
H6'1 |
62.6 |
299.9 |
| O5' |
C5' |
C6' |
H6'2 |
172.1 |
179.8 |
| H5' |
C5' |
C4' |
O4' |
187.3 |
178.6 |
| H5' |
C5' |
C4' |
H4' |
306.8 |
298.9 |
| C4' |
C5' |
H5' |
C6' |
121.8 |
119.9 |
| C4' |
C5' |
H5' |
O5' |
238.2 |
239.8 |
| C6' |
C5' |
H5' |
O5' |
116.4 |
119.9 |
| H5' |
C5' |
C6' |
O6' |
177.2 |
300.0 |
| H5' |
C5' |
C6' |
H6'1 |
302.5 |
180.0 |
| H5' |
C5' |
C6' |
H6'2 |
52.0 |
60.0 |
| O6' |
C6' |
C5' |
O5' |
297.4 |
59.9 |
| O6' |
C6' |
C5' |
H5' |
177.2 |
300.0 |
| C5' |
C6' |
O6' |
H6'1 |
125.3 |
240.0 |
| C5' |
C6' |
O6' |
H6'2 |
234.7 |
119.9 |
| H6'1 |
C6' |
O6' |
H6'2 |
109.5 |
239.9 |
| H6'1 |
C6' |
C5' |
O5' |
62.6 |
299.9 |
| H6'1 |
C6' |
C5' |
H5' |
302.5 |
180.0 |
| C5' |
C6' |
H6'1 |
O6' |
235.0 |
120.0 |
| C5' |
C6' |
H6'1 |
H6'2 |
117.5 |
240.0 |
| O6' |
C6' |
H6'1 |
H6'2 |
242.5 |
120.0 |
| H6'1 |
C6' |
O6' |
HO6' |
54.7 |
300.0 |
| H6'2 |
C6' |
C5' |
O5' |
172.1 |
179.8 |
| H6'2 |
C6' |
C5' |
H5' |
52.0 |
60.0 |
| C5' |
C6' |
H6'2 |
O6' |
125.0 |
240.0 |
| C5' |
C6' |
H6'2 |
H6'1 |
242.5 |
120.0 |
| O6' |
C6' |
H6'2 |
H6'1 |
117.5 |
240.0 |
| H6'2 |
C6' |
O6' |
HO6' |
305.3 |
60.0 |
| HO2A |
O2' |
C2' |
H2' |
63.7 |
299.7 |
| HO3A |
O3' |
C3' |
H3' |
303.9 |
60.3 |
| HO4' |
O4' |
C4' |
H4' |
299.9 |
60.2 |
| HO6' |
O6' |
C6' |
H6'1 |
54.7 |
300.0 |
| HO6' |
O6' |
C6' |
H6'2 |
305.3 |
60.0 |