PDB Chemical Component GDM

Ideal Model

Chemical Description

Name GELDANAMYCIN
Formula C29 H40 N2 O9
Formal charge 0
Molecular weight 560.636 g/mol
Component type NON-POLYMER

Chemical features

Atom count 80
Chiral atom count 6
Chiral atoms C6 C7 C10 C11 C12 C14
Bond count 81
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (4E,6Z,8S,9S,10E,12S,13R,14S,16R)-13-hydroxy-8,14,19-trimethoxy-4,10,12,16-tetramethyl-3,20,22-trioxo-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18-pentaen-9-yl carbamate
Systematic name (OpenEye OEToolkits) [(3R,5S,6R,7S,8E,10S,11S,12Z,14E)-6-hydroxy-5,11,21-trimethoxy-3,7,9,15-tetramethyl-16,20,22-trioxo-17-azabicyclo[16.3.1]docosa-1(21),8,12,14,18-pentaen-10-yl] carbamate

Chemical Descriptors

Stereo SMILES (CACTVS) CO[C@H]1C[C@H](C)CC2=C(OC)C(=O)C=C(NC(=O)\C(=C\C=C/[C@H](OC)[C@@H](OC(N)=O)\C(=C\[C@H](C)[C@H]1O)C)C)C2=O
SMILES (CACTVS) CO[CH]1C[CH](C)CC2=C(OC)C(=O)C=C(NC(=O)C(=CC=C[CH](OC)[CH](OC(N)=O)C(=C[CH](C)[CH]1O)C)C)C2=O
Stereo SMILES (OpenEye) C[C@H]1C[C@@H]([C@@H]([C@H](\C=C(\[C@@H]([C@H](\C=C/C=C(/C(=O)NC2=CC(=O)C(=C(C1)C2=O)OC)\C)OC)OC(=O)N)/C)C)O)OC
InChI descriptor InChI=1S/C29H40N2O9/c1-15-11-19-25(34)20(14-21(32)27(19)39-7)31-28(35)16(2)9-8-10-22(37-5)26(40-29(30)36)18(4)13-17(3)24(33)23(12-15)38-6/h8-10,13-15,17,22-24,26,33H,11-12H2,1-7H3,(H2,30,36)(H,31,35)/b10-8-,16-9+,18-13+/t15-,17+,22+,23+,24-,26+/m1/s1
InChIKey descriptor QTQAWLPCGQOSGP-KSRBKZBZSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1YET
Processing site EBI