PDB Chemical Component GCV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GCV

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C7	O4	1.409	1.428
C7	H71	1.115	1.090
C7	H72	1.115	1.090
C7	H73	1.115	1.090
C1	C2	1.549	1.531
C1	O1	1.436	1.428
C1	O5	1.418	1.427
C1	H1	1.115	1.090
C2	C3	1.529	1.532
C2	O2	1.452	1.430
C2	H2	1.115	1.090
C3	C4	1.519	1.532
C3	O3	1.454	1.428
C3	H3	1.115	1.090
C4	C5	1.520	1.530
C4	O4	1.429	1.429
C4	H4	1.115	1.090
C5	C6	1.513	1.507
C5	O5	1.426	1.425
C5	H5	1.115	1.090
C6	O6A	1.212	1.209
C6	O6B	1.257	1.341
O1	HO1	0.950	0.967
O2	HO2	0.950	0.967
O3	HO3	0.950	0.967
O6B	HO6B	0.950	0.966

Bond Angles for GCV

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O4	C7	H71	113.8	109.5
O4	C7	H72	110.7	109.5
O4	C7	H73	110.6	109.5
C7	O4	C4	113.7	106.8
H71	C7	H72	110.7	109.5
H71	C7	H73	110.6	109.4
H72	C7	H73	99.6	109.5
C2	C1	O1	109.1	109.4
C2	C1	O5	112.1	109.8
C2	C1	H1	109.2	109.4
C1	C2	C3	110.9	109.0
C1	C2	O2	108.8	109.6
C1	C2	H2	110.1	109.5
O1	C1	O5	108.0	109.3
O1	C1	H1	109.2	109.5
C1	O1	HO1	109.0	106.8
O5	C1	H1	109.2	109.4
C1	O5	C5	114.4	107.7
C3	C2	O2	106.7	109.6
C3	C2	H2	110.1	109.6
C2	C3	C4	114.5	108.7
C2	C3	O3	107.7	109.8
C2	C3	H3	108.1	109.6
O2	C2	H2	110.1	109.6
C2	O2	HO2	108.8	106.8
C4	C3	O3	110.3	109.6
C4	C3	H3	108.0	109.6
C3	C4	C5	109.3	109.1
C3	C4	O4	108.5	109.6
C3	C4	H4	110.0	109.6
O3	C3	H3	108.1	109.6
C3	O3	HO3	107.7	106.8
C5	C4	O4	109.0	109.5
C5	C4	H4	110.0	109.5
C4	C5	C6	111.7	109.5
C4	C5	O5	109.5	109.9
C4	C5	H5	109.2	109.3
O4	C4	H4	110.0	109.5
C6	C5	O5	108.0	109.4
C6	C5	H5	109.2	109.3
C5	C6	O6A	118.3	119.9
C5	C6	O6B	119.7	120.1
O5	C5	H5	109.2	109.4
O6A	C6	O6B	122.0	120.0
C6	O6B	HO6B	119.7	120.1

Torsion Angles for GCV

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H71	C7	O4	H72	234.7	239.9
H71	C7	O4	H73	125.2	119.9
H72	C7	O4	H73	250.6	240.0
C3	C4	O4	C7	120.7	96.9
C5	C4	O4	C7	239.6	216.5
C7	O4	C4	H4	0.3	336.6
O4	C7	H71	H72	125.4	120.1
O4	C7	H71	H73	234.8	240.0
H71	C7	O4	C4	180.0	179.5
H72	C7	H71	H73	109.4	119.9
O4	C7	H72	H71	232.9	239.9
O4	C7	H72	H73	116.5	120.0
H72	C7	O4	C4	305.3	299.5
H71	C7	H72	H73	243.5	240.1
O4	C7	H73	H71	127.0	120.0
O4	C7	H73	H72	243.5	239.9
H73	C7	O4	C4	54.7	59.6
H71	C7	H73	H72	116.5	119.9
O1	C1	C2	O5	240.4	240.0
O1	C1	C2	H1	119.2	119.9
C2	C1	O1	HO1	180.0	180.0
O5	C1	C2	H1	238.8	239.9
C2	C1	O5	C5	302.1	292.5
C3	C2	C1	O2	243.0	240.1
C3	C2	C1	H2	122.2	119.9
C1	C2	C3	C4	316.4	306.3
C1	C2	C3	O3	193.4	186.4
C1	C2	C3	H3	76.9	66.0
O2	C2	C1	H2	239.2	239.8
C1	C2	O2	HO2	180.0	60.4
C2	C1	O1	O5	122.1	120.2
C2	C1	O1	H1	240.8	240.1
O1	C1	C2	C3	285.8	301.2
O1	C1	C2	O2	42.8	61.2
O1	C1	C2	H2	163.6	181.4
O5	C1	O1	H1	118.6	119.9
O1	C1	O5	C5	62.3	52.5
C2	C1	O5	O1	239.8	240.0
C2	C1	O5	H1	121.2	120.1
O5	C1	C2	C3	45.4	61.2
O5	C1	C2	O2	162.4	181.1
O5	C1	C2	H2	283.2	301.4
O1	C1	O5	H1	241.4	240.1
O5	C1	O1	HO1	57.9	59.8
C4	C5	O5	C1	64.3	67.4
C6	C5	O5	C1	186.1	187.7
C1	O5	C5	H5	304.8	307.5
C2	C1	H1	O1	119.2	119.9
C2	C1	H1	O5	237.1	239.7
H1	C1	C2	C3	166.6	181.3
H1	C1	C2	O2	283.6	301.2
H1	C1	C2	H2	44.4	61.5
O1	C1	H1	O5	117.9	119.8
H1	C1	O1	HO1	299.2	299.9
H1	C1	O5	C5	181.0	172.4
C3	C2	C1	O1	285.8	301.2
C3	C2	C1	O5	45.4	61.2
C3	C2	C1	H1	166.6	181.3
C1	C2	C3	O2	118.3	119.9
C1	C2	C3	H2	237.8	240.1
O2	C2	C3	H2	119.5	120.2
C3	C2	O2	HO2	299.7	180.0
C4	C3	C2	O3	123.0	119.9
C4	C3	C2	H3	239.6	240.3
C2	C3	C4	C5	50.0	53.6
C2	C3	C4	O4	168.7	173.6
C2	C3	C4	H4	289.1	293.8
O3	C3	C2	H3	116.5	120.4
C2	C3	O3	HO3	180.0	299.3
O2	C2	C1	O1	42.8	61.2
O2	C2	C1	O5	162.4	181.1
O2	C2	C1	H1	283.6	301.2
C1	C2	O2	C3	240.3	240.4
C1	C2	O2	H2	120.8	120.2
C3	C2	O2	H2	240.5	239.8
O2	C2	C3	C4	198.1	186.4
O2	C2	C3	O3	75.0	66.5
O2	C2	C3	H3	318.5	306.1
H2	C2	C1	O1	163.6	181.4
H2	C2	C1	O5	283.2	301.4
H2	C2	C1	H1	44.4	61.5
C1	C2	H2	C3	122.6	119.6
C1	C2	H2	O2	240.0	239.8
C3	C2	H2	O2	117.4	120.2
H2	C2	C3	C4	78.6	66.1
H2	C2	C3	O3	315.5	306.3
H2	C2	C3	H3	199.0	185.9
H2	C2	O2	HO2	59.2	300.2
C7	O4	C4	C3	120.7	96.9
C4	C3	C2	O2	198.1	186.4
C4	C3	C2	H2	78.6	66.1
C2	C3	C4	O3	238.4	240.0
C2	C3	C4	H3	120.5	119.8
O3	C3	C4	H3	242.1	239.8
C4	C3	O3	HO3	54.5	180.0
C5	C4	C3	O4	241.2	240.1
C5	C4	C3	H4	120.9	119.9
C3	C4	C5	C6	182.7	178.7
C3	C4	C5	O5	302.2	298.9
C3	C4	C5	H5	61.7	59.0
O4	C4	C3	H4	239.7	239.8
O3	C3	C2	O2	75.0	66.5
O3	C3	C2	H2	315.5	306.3
C2	C3	O3	C4	125.6	119.3
C2	C3	O3	H3	243.5	239.6
C4	C3	O3	H3	117.9	120.3
O3	C3	C4	C5	171.6	173.6
O3	C3	C4	O4	290.3	293.5
O3	C3	C4	H4	50.7	53.7
H3	C3	C2	O2	318.5	306.1
H3	C3	C2	H2	199.0	185.9
C2	C3	H3	C4	235.6	240.8
C2	C3	H3	O3	116.3	120.5
C4	C3	H3	O3	240.6	239.7
H3	C3	C4	C5	289.5	293.9
H3	C3	C4	O4	48.3	53.8
H3	C3	C4	H4	168.6	174.0
H3	C3	O3	HO3	296.5	59.8
C7	O4	C4	C5	239.6	216.5
C1	O5	C5	C4	64.3	67.4
C5	C4	C3	O3	171.6	173.6
C5	C4	C3	H3	289.5	293.9
C3	C4	C5	O4	118.4	120.0
C3	C4	C5	H4	239.1	240.1
O4	C4	C5	H4	120.7	120.1
C6	C5	C4	O5	240.5	239.8
C6	C5	C4	H5	120.9	119.8
C4	C5	C6	O6A	278.5	116.8
C4	C5	C6	O6B	100.3	296.9
O5	C5	C4	H5	240.5	240.0
C4	O4	C7	H71	180.0	179.5
C4	O4	C7	H72	305.3	299.5
C4	O4	C7	H73	54.7	59.6
O4	C4	C3	O3	290.3	293.5
O4	C4	C3	H3	48.3	53.8
C3	C4	O4	C5	241.1	240.3
C3	C4	O4	H4	120.4	120.2
C5	C4	O4	H4	239.3	239.9
O4	C4	C5	C6	64.2	58.7
O4	C4	C5	O5	183.8	179.0
O4	C4	C5	H5	303.3	299.0
H4	C4	C3	O3	50.7	53.7
H4	C4	C3	H3	168.6	174.0
C3	C4	H4	C5	120.5	119.6
C3	C4	H4	O4	240.6	239.8
C5	C4	H4	O4	120.1	120.1
H4	C4	C5	C6	303.6	298.6
H4	C4	C5	O5	63.1	58.8
H4	C4	C5	H5	182.6	178.9
C1	O5	C5	C6	186.1	187.7
C6	C5	C4	O4	64.2	58.7
C6	C5	C4	H4	303.6	298.6
C4	C5	C6	O5	120.4	120.5
C4	C5	C6	H5	239.1	240.3
O5	C5	C6	H5	118.6	119.8
O6A	C6	C5	O6B	178.3	179.9
C5	C6	O6B	HO6B	180.0	180.0
C5	O5	C1	H1	181.0	172.4
O5	C5	C4	O4	183.8	179.0
O5	C5	C4	H4	63.1	58.8
C4	C5	O5	C6	238.2	239.8
C4	C5	O5	H5	119.5	120.0
C6	C5	O5	H5	241.3	240.2
O5	C5	C6	O6A	158.1	356.3
O5	C5	C6	O6B	339.8	176.5
H5	C5	C4	O4	303.3	299.0
H5	C5	C4	H4	182.6	178.9
C4	C5	H5	C6	122.4	119.8
C4	C5	H5	O5	240.3	239.7
C6	C5	H5	O5	117.9	119.8
H5	C5	C6	O6A	39.5	236.5
H5	C5	C6	O6B	221.2	56.7
O6A	C6	C5	O5	158.1	356.3
O6A	C6	C5	H5	39.5	236.5
C5	C6	O6A	O6B	181.8	180.1
O6A	C6	O6B	HO6B	1.8	0.1
O6B	C6	C5	O5	339.8	176.5
O6B	C6	C5	H5	221.2	56.7
C5	C6	O6B	O6A	178.2	179.9
HO1	O1	C1	O5	57.9	59.8
HO1	O1	C1	H1	299.2	299.9
HO2	O2	C2	H2	59.2	300.2
HO3	O3	C3	H3	296.5	59.8