PDB Chemical Component GCS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for GCS

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.524 1.530
C1 O1 1.470 1.428
C1 O5 1.474 1.426
C1 H1 1.114 1.090
C2 C3 1.495 1.531
C2 N2 1.484 1.469
C2 H2 1.115 1.090
C3 C4 1.541 1.532
C3 O3 1.519 1.428
C3 H3 1.114 1.090
C4 C5 1.533 1.530
C4 O4 1.436 1.429
C4 H4 1.115 1.090
C5 C6 1.609 1.530
C5 O5 1.484 1.425
C5 H5 1.114 1.090
C6 O6 1.536 1.427
C6 H61 1.116 1.089
C6 H62 1.115 1.090
N2 HN21 1.020 1.009
N2 HN22 1.019 1.008
O1 HO1 0.949 0.967
O3 HO3 0.950 0.967
O4 HO4 0.951 0.967
O6 HO6 0.951 0.967

Bond Angles for GCS

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 124.9 109.5
C2 C1 O5 112.7 109.8
C2 C1 H1 92.9 109.4
C1 C2 C3 107.6 109.2
C1 C2 N2 110.7 109.6
C1 C2 H2 110.4 109.5
O1 C1 O5 101.7 109.4
O1 C1 H1 105.9 109.4
C1 O1 HO1 124.9 106.8
O5 C1 H1 120.0 109.4
C1 O5 C5 117.6 107.7
C3 C2 N2 111.1 109.6
C3 C2 H2 110.0 109.5
C2 C3 C4 111.1 108.7
C2 C3 O3 109.7 109.9
C2 C3 H3 108.4 109.5
N2 C2 H2 107.0 109.5
C2 N2 HN21 110.6 106.7
C2 N2 HN22 111.7 106.7
C4 C3 O3 110.0 109.6
C4 C3 H3 108.0 109.6
C3 C4 C5 105.3 109.1
C3 C4 O4 89.0 109.7
C3 C4 H4 121.2 109.5
O3 C3 H3 109.6 109.5
C3 O3 HO3 109.7 106.9
C5 C4 O4 101.2 109.6
C5 C4 H4 111.9 109.5
C4 C5 C6 113.9 109.4
C4 C5 O5 103.9 109.8
C4 C5 H5 109.6 109.4
O4 C4 H4 124.4 109.5
C4 O4 HO4 89.0 106.8
C6 C5 O5 107.3 109.4
C6 C5 H5 106.3 109.4
C5 C6 O6 112.5 109.6
C5 C6 H61 111.1 109.5
C5 C6 H62 111.1 109.4
O5 C5 H5 116.0 109.4
O6 C6 H61 111.1 109.5
O6 C6 H62 111.1 109.5
C6 O6 HO6 112.4 106.9
H61 C6 H62 99.2 109.4
HN21 N2 HN22 111.8 106.8

Torsion Angles for GCS

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 124.0 120.1
O1 C1 C2 H1 248.3 240.1
C2 C1 O1 HO1 180.0 180.0
O5 C1 C2 H1 124.3 120.0
C2 C1 O5 C5 309.2 292.5
C3 C2 C1 N2 238.4 240.0
C3 C2 C1 H2 120.1 119.9
C1 C2 C3 C4 301.0 306.5
C1 C2 C3 O3 179.2 186.5
C1 C2 C3 H3 59.6 66.1
N2 C2 C1 H2 241.7 239.9
C1 C2 N2 HN21 180.0 60.1
C1 C2 N2 HN22 54.8 173.9
C2 C1 O1 O5 231.4 239.6
C2 C1 O1 H1 105.3 119.8
O1 C1 C2 C3 170.7 181.2
O1 C1 C2 N2 292.3 301.3
O1 C1 C2 H2 50.6 61.4
O5 C1 O1 H1 233.9 240.2
O1 C1 O5 C5 173.2 172.3
C2 C1 O5 O1 136.0 120.2
C2 C1 O5 H1 252.3 240.0
O5 C1 C2 C3 46.7 61.1
O5 C1 C2 N2 168.3 181.1
O5 C1 C2 H2 286.6 301.2
O1 C1 O5 H1 116.2 119.8
O5 C1 O1 HO1 308.7 300.4
C4 C5 O5 C1 58.8 67.5
C6 C5 O5 C1 179.8 187.7
C1 O5 C5 H5 298.5 307.5
C2 C1 H1 O1 232.4 240.1
C2 C1 H1 O5 118.4 120.3
H1 C1 C2 C3 282.4 301.1
H1 C1 C2 N2 44.0 61.1
H1 C1 C2 H2 162.3 181.2
O1 C1 H1 O5 246.0 240.2
H1 C1 O1 HO1 74.8 60.2
H1 C1 O5 C5 57.0 52.5
C3 C2 C1 O1 170.7 181.2
C3 C2 C1 O5 46.7 61.1
C3 C2 C1 H1 282.4 301.1
C1 C2 C3 N2 121.3 120.0
C1 C2 C3 H2 239.6 240.1
N2 C2 C3 H2 118.3 120.1
C3 C2 N2 HN21 299.5 179.8
C3 C2 N2 HN22 174.3 293.7
C4 C3 C2 O3 121.8 120.0
C4 C3 C2 H3 241.4 240.3
C2 C3 C4 C5 70.6 53.5
C2 C3 C4 O4 171.9 173.5
C2 C3 C4 H4 302.5 293.7
O3 C3 C2 H3 119.6 120.4
C2 C3 O3 HO3 180.0 299.4
N2 C2 C1 O1 292.3 301.3
N2 C2 C1 O5 168.3 181.1
N2 C2 C1 H1 44.0 61.1
C1 C2 N2 C3 240.5 240.2
C1 C2 N2 H2 120.4 120.1
C3 C2 N2 H2 239.9 239.9
N2 C2 C3 C4 179.7 186.5
N2 C2 C3 O3 57.8 66.5
N2 C2 C3 H3 298.2 306.1
HN21 N2 C2 HN22 125.2 246.1
H2 C2 C1 O1 50.6 61.4
H2 C2 C1 O5 286.6 301.2
H2 C2 C1 H1 162.3 181.2
C1 C2 H2 C3 118.7 119.7
C1 C2 H2 N2 239.5 239.8
C3 C2 H2 N2 120.8 120.2
H2 C2 C3 C4 61.4 66.4
H2 C2 C3 O3 299.6 306.4
H2 C2 C3 H3 180.0 186.0
H2 C2 N2 HN21 59.6 300.0
H2 C2 N2 HN22 294.4 53.8
C4 C3 C2 N2 179.7 186.5
C4 C3 C2 H2 61.4 66.4
C2 C3 C4 O3 238.4 239.8
C2 C3 C4 H3 118.8 119.6
O3 C3 C4 H3 240.4 239.8
C4 C3 O3 HO3 57.5 180.0
C5 C4 C3 O4 258.7 240.0
C5 C4 C3 H4 128.1 119.8
C3 C4 C5 C6 179.1 178.7
C3 C4 C5 O5 295.5 298.9
C3 C4 C5 H5 60.2 58.9
O4 C4 C3 H4 229.4 239.8
C3 C4 O4 HO4 180.0 180.4
O3 C3 C2 N2 57.8 66.5
O3 C3 C2 H2 299.6 306.4
C2 C3 O3 C4 122.5 119.4
C2 C3 O3 H3 241.1 239.6
C4 C3 O3 H3 118.6 120.3
O3 C3 C4 C5 192.2 173.7
O3 C3 C4 O4 293.5 293.7
O3 C3 C4 H4 64.1 53.9
H3 C3 C2 N2 298.2 306.1
H3 C3 C2 H2 180.0 186.0
C2 C3 H3 C4 239.5 240.9
C2 C3 H3 O3 119.7 120.6
C4 C3 H3 O3 240.2 239.7
H3 C3 C4 C5 311.8 293.9
H3 C3 C4 O4 53.1 53.9
H3 C3 C4 H4 183.7 174.1
H3 C3 O3 HO3 298.9 59.8
C1 O5 C5 C4 58.8 67.5
C5 C4 C3 O3 192.2 173.7
C5 C4 C3 H3 311.8 293.9
C3 C4 C5 O4 92.1 120.1
C3 C4 C5 H4 226.5 240.2
O4 C4 C5 H4 134.4 120.2
C5 C4 O4 HO4 285.4 300.1
C6 C5 C4 O5 243.6 239.9
C6 C5 C4 H5 119.0 119.8
C4 C5 C6 O6 179.6 180.3
C4 C5 C6 H61 304.9 300.4
C4 C5 C6 H62 54.3 60.3
O5 C5 C4 H5 235.4 239.9
O4 C4 C3 O3 293.5 293.7
O4 C4 C3 H3 53.1 53.9
C3 C4 O4 C5 254.6 240.3
C3 C4 O4 H4 128.1 120.1
C5 C4 O4 H4 233.4 239.9
O4 C4 C5 C6 87.1 58.7
O4 C4 C5 O5 203.5 178.8
O4 C4 C5 H5 328.1 298.9
H4 C4 C3 O3 64.1 53.9
H4 C4 C3 H3 183.7 174.1
C3 C4 H4 C5 125.1 119.6
C3 C4 H4 O4 247.0 239.7
C5 C4 H4 O4 121.9 120.2
H4 C4 C5 C6 312.6 298.5
H4 C4 C5 O5 69.0 58.6
H4 C4 C5 H5 193.7 178.7
H4 C4 O4 HO4 51.9 60.2
C1 O5 C5 C6 179.8 187.7
C6 C5 C4 O4 87.1 58.7
C6 C5 C4 H4 312.6 298.5
C4 C5 C6 O5 114.4 120.4
C4 C5 C6 H5 239.1 240.2
O5 C5 C6 H5 124.8 119.9
O6 C6 C5 H61 234.7 239.9
O6 C6 C5 H62 125.3 120.0
C5 C6 O6 HO6 180.0 180.0
H61 C6 C5 H62 250.6 240.1
C5 O5 C1 H1 57.0 52.5
O5 C5 C4 O4 203.5 178.8
O5 C5 C4 H4 69.0 58.6
C4 C5 O5 C6 239.0 239.9
C4 C5 O5 H5 120.4 120.1
C6 C5 O5 H5 241.3 240.2
O5 C5 C6 O6 65.2 59.9
O5 C5 C6 H61 190.5 180.0
O5 C5 C6 H62 300.0 299.9
H5 C5 C4 O4 328.1 298.9
H5 C5 C4 H4 193.7 178.7
C4 C5 H5 C6 123.6 119.8
C4 C5 H5 O5 242.8 239.7
C6 C5 H5 O5 119.2 119.9
H5 C5 C6 O6 300.5 300.1
H5 C5 C6 H61 65.8 60.2
H5 C5 C6 H62 175.2 180.1
O6 C6 C5 O5 65.2 59.9
O6 C6 C5 H5 300.5 300.1
C5 C6 O6 H61 125.3 120.1
C5 C6 O6 H62 234.7 240.0
H61 C6 O6 H62 109.5 119.9
H61 C6 C5 O5 190.5 180.0
H61 C6 C5 H5 65.8 60.2
C5 C6 H61 O6 234.0 239.8
C5 C6 H61 H62 117.0 119.9
O6 C6 H61 H62 243.0 240.0
H61 C6 O6 HO6 54.7 59.9
H62 C6 C5 O5 300.0 299.9
H62 C6 C5 H5 175.2 180.1
C5 C6 H62 O6 126.0 120.1
C5 C6 H62 H61 243.0 240.0
O6 C6 H62 H61 117.0 120.0
H62 C6 O6 HO6 305.2 300.0
HN21 N2 C2 H2 59.6 300.0
C2 N2 HN21 HN22 234.8 113.9
HN22 N2 C2 H2 294.4 53.8
C2 N2 HN22 HN21 124.6 246.2
HO1 O1 C1 O5 308.7 300.4
HO1 O1 C1 H1 74.8 60.2
HO3 O3 C3 H3 298.9 59.8
HO4 O4 C4 H4 51.9 60.2
HO6 O6 C6 H61 54.7 59.9
HO6 O6 C6 H62 305.2 300.0