PDB Chemical Component GCP

Ideal Model

Chemical Description

Name PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Formula C11 H18 N5 O13 P3
Formal charge 0
Molecular weight 521.208 g/mol
Component type NON-POLYMER

Chemical features

Atom count 50
Chiral atom count 6
Chiral atoms PB PA C4' C3' C2' C1'
Bond count 52
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]guanosine
Systematic name (OpenEye OEToolkits) [[[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]methylphosphonic acid

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)C[P](O)(O)=O)[C@@H](O)[C@H]3O
SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)C[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(CP(=O)(O)O)O)O)O)N=C(NC2=O)N
InChI descriptor InChI=1S/C11H18N5O13P3/c12-11-14-8-5(9(19)15-11)13-2-16(8)10-7(18)6(17)4(28-10)1-27-32(25,26)29-31(23,24)3-30(20,21)22/h2,4,6-7,10,17-18H,1,3H2,(H,23,24)(H,25,26)(H2,20,21,22)(H3,12,14,15,19)/t4-,6-,7-,10-/m1/s1
InChIKey descriptor PHBDHXOBFUBCJD-KQYNXXCUSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Replaces GTO
Model PDB code 1HOP
Processing site RCSB